RNA–Protein interactions for RNA: ENST00000335497.11

RNF220-201, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 1,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-201ENST00000335497 CCL23P55773 120 aa30.37■■■□□ 2.45
RNF220-201ENST00000335497 RPUSD2Q8IZ73 545 aaKnown RBP30.37■■■□□ 2.45
RNF220-201ENST00000335497 TNKSO95271 1327 aa30.37■■■□□ 2.45
RNF220-201ENST00000335497 A6NJR5 290 aa30.36■■■□□ 2.45
RNF220-201ENST00000335497 PARP1P09874 1014 aaKnown RBP30.36■■■□□ 2.45
RNF220-201ENST00000335497 TTLL4Q14679 1199 aa30.36■■■□□ 2.45
RNF220-201ENST00000335497 RAB30Q15771 203 aa30.36■■■□□ 2.45
RNF220-201ENST00000335497 CXXC1Q9P0U4 656 aaPredicted RBP30.36■■■□□ 2.45
RNF220-201ENST00000335497 TXNP10599 105 aaKnown RBP30.35■■■□□ 2.45
RNF220-201ENST00000335497 MCF2L2Q86YR7 1114 aa30.35■■■□□ 2.45
RNF220-201ENST00000335497 UBAC1Q9BSL1 405 aa30.35■■■□□ 2.45
RNF220-201ENST00000335497 TRMT13Q9NUP7 481 aaKnown RBP30.35■■■□□ 2.45
RNF220-201ENST00000335497 SCN10AQ9Y5Y9 1956 aa30.35■■■□□ 2.45
RNF220-201ENST00000335497 VCANP13611 3396 aa30.34■■■□□ 2.45
RNF220-201ENST00000335497 OTOP2Q7RTS6 562 aa30.34■■■□□ 2.45
RNF220-201ENST00000335497 SYTL5Q8TDW5 730 aaPredicted RBP30.34■■■□□ 2.45
RNF220-201ENST00000335497 NSUN6Q8TEA1 469 aaKnown RBP30.34■■■□□ 2.45
RNF220-201ENST00000335497 COPS5Q92905 334 aa30.34■■■□□ 2.45
RNF220-201ENST00000335497 MSRAQ9UJ68 235 aa30.34■■■□□ 2.45
RNF220-201ENST00000335497 MRPL11Q9Y3B7 192 aaKnown RBP30.34■■■□□ 2.45
RNF220-201ENST00000335497 QRICH1Q2TAL8 776 aa30.33■■■□□ 2.45
RNF220-201ENST00000335497 NBPF20Q3BBV1 942 aa30.33■■■□□ 2.45
RNF220-201ENST00000335497 NFRKBQ6P4R8 1299 aa30.33■■■□□ 2.45
RNF220-201ENST00000335497 FBXO11Q86XK2 927 aa30.33■■■□□ 2.45
RNF220-201ENST00000335497 TBC1D5Q92609 795 aa30.33■■■□□ 2.45
RNF220-201ENST00000335497 IWS1Q96ST2 819 aa30.33■■■□□ 2.45
RNF220-201ENST00000335497 JMJD4Q9H9V9 463 aa30.33■■■□□ 2.45
RNF220-201ENST00000335497 CHD9Q3L8U1 2897 aa30.33■■■□□ 2.45
RNF220-201ENST00000335497 ARIH2O95376 493 aa30.32■■■□□ 2.44
RNF220-201ENST00000335497 PFKMP08237 780 aa30.32■■■□□ 2.44
RNF220-201ENST00000335497 IFIT1BQ5T764 474 aaKnown RBP30.32■■■□□ 2.44
RNF220-201ENST00000335497 CCDC62Q6P9F0 684 aa30.32■■■□□ 2.44
RNF220-201ENST00000335497 TAAR1Q96RJ0 339 aa30.32■■■□□ 2.44
RNF220-201ENST00000335497 DHX16O60231 1041 aaKnown RBP30.31■■■□□ 2.44
RNF220-201ENST00000335497 CYP2C9P11712 490 aa30.31■■■□□ 2.44
RNF220-201ENST00000335497 PTPN11Q06124 597 aaPredicted RBP30.31■■■□□ 2.44
RNF220-201ENST00000335497 FAM47CQ5HY64 1035 aa30.31■■■□□ 2.44
RNF220-201ENST00000335497 SCLYQ96I15 445 aa30.31■■■□□ 2.44
RNF220-201ENST00000335497 IL25Q9H293 177 aa30.31■■■□□ 2.44
RNF220-201ENST00000335497 COL20A1Q9P218 1284 aa30.31■■■□□ 2.44
RNF220-201ENST00000335497 VWCEQ96DN2 955 aa30.3■■■□□ 2.44
RNF220-201ENST00000335497 RMDN3Q96TC7 470 aa30.3■■■□□ 2.44
RNF220-201ENST00000335497 VAT1LQ9HCJ6 419 aa30.3■■■□□ 2.44
RNF220-201ENST00000335497 MYH6P13533 1939 aa30.3■■■□□ 2.44
RNF220-201ENST00000335497 SEC23AQ15436 765 aa30.29■■■□□ 2.44
RNF220-201ENST00000335497 STXBP2Q15833 593 aa30.29■■■□□ 2.44
RNF220-201ENST00000335497 TTC22Q5TAA0 569 aa30.29■■■□□ 2.44
RNF220-201ENST00000335497 GAS2L1Q99501 681 aaPredicted RBP30.29■■■□□ 2.44
RNF220-201ENST00000335497 SLC4A7Q9Y6M7 1214 aa30.29■■■□□ 2.44
RNF220-201ENST00000335497 GSPT1P15170 499 aaKnown RBP30.28■■■□□ 2.44
RNF220-201ENST00000335497 PDE4AP27815 886 aa30.28■■■□□ 2.44
RNF220-201ENST00000335497 SEPT14Q6ZU15 432 aa30.28■■■□□ 2.44
RNF220-201ENST00000335497 AMNQ9BXJ7 453 aa30.28■■■□□ 2.44
RNF220-201ENST00000335497 PITPNM1O00562 1244 aa30.27■■■□□ 2.44
RNF220-201ENST00000335497 GH1P01241 217 aa30.27■■■□□ 2.44
RNF220-201ENST00000335497 STAG2Q8N3U4 1231 aa30.27■■■□□ 2.44
RNF220-201ENST00000335497 PRDM12Q9H4Q4 367 aa30.27■■■□□ 2.44
RNF220-201ENST00000335497 RFC2P35250 354 aa30.26■■■□□ 2.43
RNF220-201ENST00000335497 GHRHRQ02643 423 aa30.26■■■□□ 2.43
RNF220-201ENST00000335497 ARHGAP1Q07960 439 aa30.26■■■□□ 2.43
RNF220-201ENST00000335497 ARHGEF16Q5VV41 709 aa30.26■■■□□ 2.43
RNF220-201ENST00000335497 CYB5R4Q7L1T6 521 aa30.26■■■□□ 2.43
RNF220-201ENST00000335497 AFG1LQ8WV93 481 aa30.26■■■□□ 2.43
RNF220-201ENST00000335497 RUFY2Q8WXA3 655 aa30.26■■■□□ 2.43
RNF220-201ENST00000335497 MTMR8Q96EF0 704 aa30.26■■■□□ 2.43
RNF220-201ENST00000335497 NKX2-4Q9H2Z4 354 aa30.26■■■□□ 2.43
RNF220-201ENST00000335497 SLC28A3Q9HAS3 691 aa30.26■■■□□ 2.43
RNF220-201ENST00000335497 YBX2Q9Y2T7 364 aaKnown RBP30.26■■■□□ 2.43
RNF220-201ENST00000335497 KIAA1217Q5T5P2 1943 aa30.26■■■□□ 2.43
RNF220-201ENST00000335497 KLRF2D3W0D1 207 aa30.25■■■□□ 2.43
RNF220-201ENST00000335497 EIF3JO75822 258 aaKnown RBP30.25■■■□□ 2.43
RNF220-201ENST00000335497 TRDNQ13061 729 aa30.25■■■□□ 2.43
RNF220-201ENST00000335497 LY6KQ17RY6 165 aa30.25■■■□□ 2.43
RNF220-201ENST00000335497 USP38Q8NB14 1042 aa30.25■■■□□ 2.43
RNF220-201ENST00000335497 MAP3K20Q9NYL2 800 aaKnown RBP30.25■■■□□ 2.43
RNF220-201ENST00000335497 GBF1Q92538 1859 aa30.25■■■□□ 2.43
RNF220-201ENST00000335497 MMP3P08254 477 aa30.24■■■□□ 2.43
RNF220-201ENST00000335497 HSD17B4P51659 736 aa30.24■■■□□ 2.43
RNF220-201ENST00000335497 BFSP2Q13515 415 aa30.24■■■□□ 2.43
RNF220-201ENST00000335497 RETREG2Q8NC44 543 aa30.24■■■□□ 2.43
RNF220-201ENST00000335497 PXMP2Q9NR77 195 aa30.24■■■□□ 2.43
RNF220-201ENST00000335497 MAD2L2Q9UI95 211 aa30.24■■■□□ 2.43
RNF220-201ENST00000335497 SUPT16HQ9Y5B9 1047 aaKnown RBP30.24■■■□□ 2.43
RNF220-201ENST00000335497 PCDHA11Q9Y5I1 949 aa30.24■■■□□ 2.43
RNF220-201ENST00000335497 U3KPZ7 1027 aaPredicted RBP30.24■■■□□ 2.43
RNF220-201ENST00000335497 CHD7Q9P2D1 2997 aa30.24■■■□□ 2.43
RNF220-201ENST00000335497 PALM3A6NDB9 673 aaPredicted RBP30.23■■■□□ 2.43
RNF220-201ENST00000335497 ZBBXA8MT70 800 aa30.23■■■□□ 2.43
RNF220-201ENST00000335497 ZBTB5O15062 677 aa30.23■■■□□ 2.43
RNF220-201ENST00000335497 CFBP00751 764 aa30.23■■■□□ 2.43
RNF220-201ENST00000335497 DEFB128Q7Z7B8 93 aa30.23■■■□□ 2.43
RNF220-201ENST00000335497 SESTD1Q86VW0 696 aa30.23■■■□□ 2.43
RNF220-201ENST00000335497 SAMD3Q8N6K7 520 aa30.23■■■□□ 2.43
RNF220-201ENST00000335497 PPP1R13LQ8WUF5 828 aa30.23■■■□□ 2.43
RNF220-201ENST00000335497 EMID1Q96A84 441 aaPredicted RBP30.23■■■□□ 2.43
RNF220-201ENST00000335497 DDX41Q9UJV9 622 aaKnown RBP30.23■■■□□ 2.43
RNF220-201ENST00000335497 MYO9BQ13459 2157 aa30.22■■■□□ 2.43
RNF220-201ENST00000335497 OPLAHO14841 1288 aa30.22■■■□□ 2.43
RNF220-201ENST00000335497 NR3C2P08235 984 aa30.22■■■□□ 2.43
RNF220-201ENST00000335497 IQCF3P0C7M6 154 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms