RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 SHCBP1Q8NEM2 672 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 GTF3C2Q8WUA4 911 aaPredicted RBP18.86■□□□□ 0.61
SHOX-201ENST00000334060 MROH8Q9H579 483 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 MGAMO43451 1857 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 MCM3APO60318 1980 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 SLC37A4O43826 429 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 FCER1AP12319 257 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 MRPS9P82933 396 aaKnown RBP18.86■□□□□ 0.61
SHOX-201ENST00000334060 GRB14Q14449 540 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 EEPD1Q7L9B9 569 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 RMDN3Q96TC7 470 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 PXMP2Q9NR77 195 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 GJD2Q9UKL4 321 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 CNPY2Q9Y2B0 182 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 MYH15Q9Y2K3 1946 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 RPTORQ8N122 1335 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 CCDC194A0A1B0GVG4 234 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 FAM86B1E9PN63 330 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 FAM86B2P0C5J1 330 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 CCNA1P78396 465 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 SP3Q02447 781 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 KCTD2Q14681 263 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 ZNF174Q15697 407 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 LETM2Q2VYF4 491 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 TPRNQ4KMQ1 711 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 MORN1Q5T089 497 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 MCF2L2Q86YR7 1114 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 CCAR1Q8IX12 1150 aaKnown RBP18.85■□□□□ 0.61
SHOX-201ENST00000334060 BCAS3Q9H6U6 928 aa18.85■□□□□ 0.61
SHOX-201ENST00000334060 SPDYE3A6NKU9 549 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 POTEB2H3BUK9 544 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 TNPO2O14787 897 aaKnown RBP18.84■□□□□ 0.61
SHOX-201ENST00000334060 CYP2B6P20813 491 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 ARHGAP4P98171 946 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 PRKCZQ05513 592 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 PGM5Q15124 567 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 NONOQ15233 471 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHOX-201ENST00000334060 PDCD2LQ9BRP1 358 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 CFHR5Q9BXR6 569 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 TELO2Q9Y4R8 837 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 TCHHQ07283 1943 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 LRRC37A2A6NM11 1700 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 RGS20O76081 388 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 MYCLP12524 364 aaPredicted RBP18.84■□□□□ 0.61
SHOX-201ENST00000334060 NUCB2P80303 420 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 ZNF792Q3KQV3 632 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 TMEM60Q9H2L4 133 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 BRMS1Q9HCU9 246 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 FBXO40Q9UH90 709 aa18.84■□□□□ 0.61
SHOX-201ENST00000334060 CIZ1Q9ULV3 898 aaPredicted RBP18.84■□□□□ 0.61
SHOX-201ENST00000334060 PLXNA1Q9UIW2 1896 aa18.83■□□□□ 0.61
SHOX-201ENST00000334060 SORBS3O60504 671 aa18.83■□□□□ 0.61
SHOX-201ENST00000334060 MAPK4P31152 587 aa18.83■□□□□ 0.61
SHOX-201ENST00000334060 MCM7P33993 719 aa18.83■□□□□ 0.61
SHOX-201ENST00000334060 SREBF1P36956 1147 aa18.83■□□□□ 0.61
SHOX-201ENST00000334060 ALDH5A1P51649 535 aaPredicted RBP18.83■□□□□ 0.61
SHOX-201ENST00000334060 GRIN1Q05586 938 aa18.83■□□□□ 0.61
SHOX-201ENST00000334060 GSE1Q14687 1217 aa18.83■□□□□ 0.61
SHOX-201ENST00000334060 GALNT17Q6IS24 598 aa18.83■□□□□ 0.61
SHOX-201ENST00000334060 RGS22Q8NE09 1264 aa18.83■□□□□ 0.61
SHOX-201ENST00000334060 FOXN1O15353 648 aa18.82■□□□□ 0.6
SHOX-201ENST00000334060 ITGB5P18084 799 aa18.82■□□□□ 0.6
SHOX-201ENST00000334060 TRIM32Q13049 653 aa18.82■□□□□ 0.6
SHOX-201ENST00000334060 ARHGEF16Q5VV41 709 aa18.82■□□□□ 0.6
SHOX-201ENST00000334060 KRT25Q7Z3Z0 450 aa18.82■□□□□ 0.6
SHOX-201ENST00000334060 POTEDQ86YR6 584 aa18.82■□□□□ 0.6
SHOX-201ENST00000334060 REM2Q8IYK8 340 aaPredicted RBP18.82■□□□□ 0.6
SHOX-201ENST00000334060 BICD2Q8TD16 824 aa18.82■□□□□ 0.6
SHOX-201ENST00000334060 USP6NLQ92738 828 aa18.82■□□□□ 0.6
SHOX-201ENST00000334060 PKD2L1Q9P0L9 805 aa18.82■□□□□ 0.6
SHOX-201ENST00000334060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.82■□□□□ 0.6
SHOX-201ENST00000334060 LENG9Q96B70 501 aa18.82■□□□□ 0.6
SHOX-201ENST00000334060 IVNS1ABPQ9Y6Y0 642 aa18.82■□□□□ 0.6
SHOX-201ENST00000334060 FRMPD4Q14CM0 1322 aa18.82■□□□□ 0.6
SHOX-201ENST00000334060 CCNT1O60563 726 aaKnown RBP18.81■□□□□ 0.6
SHOX-201ENST00000334060 NR3C2P08235 984 aa18.81■□□□□ 0.6
SHOX-201ENST00000334060 MAP2K1Q02750 393 aaPredicted RBP18.81■□□□□ 0.6
SHOX-201ENST00000334060 AP3B2Q13367 1082 aa18.81■□□□□ 0.6
SHOX-201ENST00000334060 SF3A1Q15459 793 aaKnown RBP18.81■□□□□ 0.6
SHOX-201ENST00000334060 TTC38Q5R3I4 469 aa18.81■□□□□ 0.6
SHOX-201ENST00000334060 PRAMEF19Q5SWL8 479 aa18.81■□□□□ 0.6
SHOX-201ENST00000334060 NEK8Q86SG6 692 aa18.81■□□□□ 0.6
SHOX-201ENST00000334060 WDR11Q9BZH6 1224 aa18.81■□□□□ 0.6
SHOX-201ENST00000334060 PFASO15067 1338 aa18.81■□□□□ 0.6
SHOX-201ENST00000334060 CASP8AP2Q9UKL3 1982 aa18.81■□□□□ 0.6
SHOX-201ENST00000334060 FIBPO43427 364 aa18.81■□□□□ 0.6
SHOX-201ENST00000334060 ARP10275 920 aa18.81■□□□□ 0.6
SHOX-201ENST00000334060 NCLP19338 710 aaKnown RBP18.81■□□□□ 0.6
SHOX-201ENST00000334060 FLT3LGP49771 235 aa18.81■□□□□ 0.6
SHOX-201ENST00000334060 FBXO16Q8IX29 292 aaPredicted RBP18.81■□□□□ 0.6
SHOX-201ENST00000334060 PDGFCQ9NRA1 345 aa18.81■□□□□ 0.6
SHOX-201ENST00000334060 IGLV3-22A0A075B6J6 115 aa18.8■□□□□ 0.6
SHOX-201ENST00000334060 TRAF1Q13077 416 aa18.8■□□□□ 0.6
SHOX-201ENST00000334060 SEMA3FQ13275 785 aa18.8■□□□□ 0.6
SHOX-201ENST00000334060 PTPAQ15257 358 aa18.8■□□□□ 0.6
SHOX-201ENST00000334060 IL17AQ16552 155 aa18.8■□□□□ 0.6
SHOX-201ENST00000334060 BRAPQ7Z569 592 aa18.8■□□□□ 0.6
SHOX-201ENST00000334060 DPP9Q86TI2 863 aa18.8■□□□□ 0.6
SHOX-201ENST00000334060 MAML3Q96JK9 1138 aa18.8■□□□□ 0.6
SHOX-201ENST00000334060 ZSCAN16Q9H4T2 348 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms