RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 DEFB118Q96PH6 123 aa23.57■■□□□ 1.36
MRPL40-201ENST00000333130 IWS1Q96ST2 819 aa23.57■■□□□ 1.36
MRPL40-201ENST00000333130 LLPHQ9BRT6 129 aaKnown RBP23.57■■□□□ 1.36
MRPL40-201ENST00000333130 STXBP3O00186 592 aa23.56■■□□□ 1.36
MRPL40-201ENST00000333130 PIK3CDO00329 1044 aa23.56■■□□□ 1.36
MRPL40-201ENST00000333130 SEPT4O43236 478 aa23.56■■□□□ 1.36
MRPL40-201ENST00000333130 ADCY7P51828 1080 aa23.56■■□□□ 1.36
MRPL40-201ENST00000333130 EHMT1Q9H9B1 1298 aa23.56■■□□□ 1.36
MRPL40-201ENST00000333130 VTA1Q9NP79 307 aa23.56■■□□□ 1.36
MRPL40-201ENST00000333130 PPFIA3O75145 1194 aa23.55■■□□□ 1.36
MRPL40-201ENST00000333130 SNAI1O95863 264 aaPredicted RBP23.55■■□□□ 1.36
MRPL40-201ENST00000333130 AKR1A1P14550 325 aa23.55■■□□□ 1.36
MRPL40-201ENST00000333130 SOX10P56693 466 aa23.55■■□□□ 1.36
MRPL40-201ENST00000333130 ACVR2BQ13705 512 aa23.55■■□□□ 1.36
MRPL40-201ENST00000333130 FCHSD1Q86WN1 690 aa23.55■■□□□ 1.36
MRPL40-201ENST00000333130 MORC4Q8TE76 937 aa23.55■■□□□ 1.36
MRPL40-201ENST00000333130 U2AF1L4Q8WU68 220 aaKnown RBP23.55■■□□□ 1.36
MRPL40-201ENST00000333130 WASF1Q92558 559 aa23.55■■□□□ 1.36
MRPL40-201ENST00000333130 PURBQ96QR8 312 aaKnown RBP23.55■■□□□ 1.36
MRPL40-201ENST00000333130 TAAR1Q96RJ0 339 aa23.55■■□□□ 1.36
MRPL40-201ENST00000333130 DDX20Q9UHI6 824 aaKnown RBP23.55■■□□□ 1.36
MRPL40-201ENST00000333130 ASTN1O14525 1302 aa23.55■■□□□ 1.36
MRPL40-201ENST00000333130 SPDYE3A6NKU9 549 aa23.54■■□□□ 1.36
MRPL40-201ENST00000333130 K7ELQ4 463 aaPredicted RBP23.54■■□□□ 1.36
MRPL40-201ENST00000333130 CAPN15O75808 1086 aa23.54■■□□□ 1.36
MRPL40-201ENST00000333130 XBP1P17861 261 aa23.54■■□□□ 1.36
MRPL40-201ENST00000333130 GJA8P48165 433 aa23.54■■□□□ 1.36
MRPL40-201ENST00000333130 PRAMEF19Q5SWL8 479 aa23.54■■□□□ 1.36
MRPL40-201ENST00000333130 C6orf50Q9HD87 102 aa23.54■■□□□ 1.36
MRPL40-201ENST00000333130 PXMP2Q9NR77 195 aa23.54■■□□□ 1.36
MRPL40-201ENST00000333130 COL20A1Q9P218 1284 aa23.54■■□□□ 1.36
MRPL40-201ENST00000333130 FAM184BQ9ULE4 1060 aa23.54■■□□□ 1.36
MRPL40-201ENST00000333130 KIAA1217Q5T5P2 1943 aa23.54■■□□□ 1.36
MRPL40-201ENST00000333130 SMCO2A6NFE2 343 aa23.53■■□□□ 1.36
MRPL40-201ENST00000333130 JAK2O60674 1132 aa23.53■■□□□ 1.36
MRPL40-201ENST00000333130 SGPL1O95470 568 aa23.53■■□□□ 1.36
MRPL40-201ENST00000333130 FDPSP14324 419 aaKnown RBP23.53■■□□□ 1.36
MRPL40-201ENST00000333130 EIF2AK2P19525 551 aaKnown RBP23.53■■□□□ 1.36
MRPL40-201ENST00000333130 GNA11P29992 359 aa23.53■■□□□ 1.36
MRPL40-201ENST00000333130 CUL4AQ13619 759 aa23.53■■□□□ 1.36
MRPL40-201ENST00000333130 STXBP2Q15833 593 aa23.53■■□□□ 1.36
MRPL40-201ENST00000333130 TYW1BQ6NUM6 668 aa23.53■■□□□ 1.36
MRPL40-201ENST00000333130 FAM177A1Q8N128 213 aaPredicted RBP23.53■■□□□ 1.36
MRPL40-201ENST00000333130 TRPV1Q8NER1 839 aa23.53■■□□□ 1.36
MRPL40-201ENST00000333130 BICD2Q8TD16 824 aa23.53■■□□□ 1.36
MRPL40-201ENST00000333130 RIC8AQ9NPQ8 531 aa23.53■■□□□ 1.36
MRPL40-201ENST00000333130 SH3GLB2Q9NR46 395 aa23.53■■□□□ 1.36
MRPL40-201ENST00000333130 ESYT2A0FGR8 921 aa23.52■■□□□ 1.36
MRPL40-201ENST00000333130 TFRCP02786 760 aaKnown RBP23.52■■□□□ 1.36
MRPL40-201ENST00000333130 RARBP10826 455 aa23.52■■□□□ 1.36
MRPL40-201ENST00000333130 EDNRBP24530 442 aa23.52■■□□□ 1.36
MRPL40-201ENST00000333130 MCTP2Q6DN12 878 aa23.52■■□□□ 1.36
MRPL40-201ENST00000333130 USP17L6PQ6QN14 398 aa23.52■■□□□ 1.36
MRPL40-201ENST00000333130 ORC3Q9UBD5 711 aaPredicted RBP23.52■■□□□ 1.36
MRPL40-201ENST00000333130 BRCA2P51587 3418 aa23.52■■□□□ 1.36
MRPL40-201ENST00000333130 MEIS2O14770 477 aa23.52■■□□□ 1.36
MRPL40-201ENST00000333130 ZNF865P0CJ78 1059 aaPredicted RBP23.52■■□□□ 1.36
MRPL40-201ENST00000333130 POTEFA5A3E0 1075 aa23.51■■□□□ 1.35
MRPL40-201ENST00000333130 FOSP01100 380 aaPredicted RBP23.51■■□□□ 1.35
MRPL40-201ENST00000333130 CCND2P30279 289 aa23.51■■□□□ 1.35
MRPL40-201ENST00000333130 CCDC144BQ3MJ40 725 aa23.51■■□□□ 1.35
MRPL40-201ENST00000333130 EEPD1Q7L9B9 569 aa23.51■■□□□ 1.35
MRPL40-201ENST00000333130 HSCBQ8IWL3 235 aa23.51■■□□□ 1.35
MRPL40-201ENST00000333130 FBXO16Q8IX29 292 aaPredicted RBP23.51■■□□□ 1.35
MRPL40-201ENST00000333130 SHISA4Q96DD7 197 aa23.51■■□□□ 1.35
MRPL40-201ENST00000333130 PDCD2LQ9BRP1 358 aa23.51■■□□□ 1.35
MRPL40-201ENST00000333130 ZMYND12Q9H0C1 365 aa23.51■■□□□ 1.35
MRPL40-201ENST00000333130 DTNBO60941 627 aa23.5■■□□□ 1.35
MRPL40-201ENST00000333130 NR3C2P08235 984 aa23.5■■□□□ 1.35
MRPL40-201ENST00000333130 HMGN5P82970 282 aaKnown RBP23.5■■□□□ 1.35
MRPL40-201ENST00000333130 AP3B2Q13367 1082 aa23.5■■□□□ 1.35
MRPL40-201ENST00000333130 PGM5Q15124 567 aa23.5■■□□□ 1.35
MRPL40-201ENST00000333130 UBE2SQ16763 222 aa23.5■■□□□ 1.35
MRPL40-201ENST00000333130 SPC25Q9HBM1 224 aa23.5■■□□□ 1.35
MRPL40-201ENST00000333130 VPS54Q9P1Q0 977 aa23.5■■□□□ 1.35
MRPL40-201ENST00000333130 STAM2O75886 525 aa23.49■■□□□ 1.35
MRPL40-201ENST00000333130 MYCLP12524 364 aaPredicted RBP23.49■■□□□ 1.35
MRPL40-201ENST00000333130 NLRP5P59047 1200 aa23.49■■□□□ 1.35
MRPL40-201ENST00000333130 IQSEC1Q6DN90 963 aa23.49■■□□□ 1.35
MRPL40-201ENST00000333130 REXO1Q8N1G1 1221 aaKnown RBP23.49■■□□□ 1.35
MRPL40-201ENST00000333130 ANKLE1Q8NAG6 615 aa23.49■■□□□ 1.35
MRPL40-201ENST00000333130 SCFD2Q8WU76 684 aa23.49■■□□□ 1.35
MRPL40-201ENST00000333130 AIFM3Q96NN9 605 aa23.49■■□□□ 1.35
MRPL40-201ENST00000333130 KATNBL1Q9H079 304 aa23.49■■□□□ 1.35
MRPL40-201ENST00000333130 CRISPLD2Q9H0B8 497 aa23.49■■□□□ 1.35
MRPL40-201ENST00000333130 FRMPD4Q14CM0 1322 aa23.48■■□□□ 1.35
MRPL40-201ENST00000333130 EIF3JO75822 258 aaKnown RBP23.48■■□□□ 1.35
MRPL40-201ENST00000333130 TNFAIP2Q03169 654 aa23.48■■□□□ 1.35
MRPL40-201ENST00000333130 XRRA1Q6P2D8 792 aa23.48■■□□□ 1.35
MRPL40-201ENST00000333130 ARRDC4Q8NCT1 418 aa23.48■■□□□ 1.35
MRPL40-201ENST00000333130 XPNPEP3Q9NQH7 507 aa23.48■■□□□ 1.35
MRPL40-201ENST00000333130 OGDHLQ9ULD0 1010 aa23.48■■□□□ 1.35
MRPL40-201ENST00000333130 DUSP11O75319 330 aaKnown RBP23.47■■□□□ 1.35
MRPL40-201ENST00000333130 EN2P19622 333 aaPredicted RBP23.47■■□□□ 1.35
MRPL40-201ENST00000333130 TTLL4Q14679 1199 aa23.47■■□□□ 1.35
MRPL40-201ENST00000333130 GNPTABQ3T906 1256 aa23.47■■□□□ 1.35
MRPL40-201ENST00000333130 LHX8Q68G74 356 aa23.47■■□□□ 1.35
MRPL40-201ENST00000333130 GALNT17Q6IS24 598 aa23.47■■□□□ 1.35
MRPL40-201ENST00000333130 INTS4Q96HW7 963 aaKnown RBP23.47■■□□□ 1.35
MRPL40-201ENST00000333130 PCDHA6Q9UN73 950 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms