RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 MOXD1Q6UVY6 613 aa19.08■□□□□ 0.64
DDX41-201ENST00000330503 LRRC8AQ8IWT6 810 aa19.08■□□□□ 0.64
DDX41-201ENST00000330503 INTS13Q9NVM9 706 aa19.08■□□□□ 0.64
DDX41-201ENST00000330503 SREBF1P36956 1147 aa19.07■□□□□ 0.64
DDX41-201ENST00000330503 TRPM4Q8TD43 1214 aa19.07■□□□□ 0.64
DDX41-201ENST00000330503 UIMC1Q96RL1 719 aa19.07■□□□□ 0.64
DDX41-201ENST00000330503 RAB34Q9BZG1 259 aa19.07■□□□□ 0.64
DDX41-201ENST00000330503 GINM1Q9NU53 330 aa19.07■□□□□ 0.64
DDX41-201ENST00000330503 IMPACTQ9P2X3 320 aa19.07■□□□□ 0.64
DDX41-201ENST00000330503 GDAQ9Y2T3 454 aa19.07■□□□□ 0.64
DDX41-201ENST00000330503 NOLC1Q14978 699 aaKnown RBP eCLIP19.07■□□□□ 0.64
DDX41-201ENST00000330503 ECM1Q16610 540 aa19.07■□□□□ 0.64
DDX41-201ENST00000330503 TMC6Q7Z403 805 aa19.07■□□□□ 0.64
DDX41-201ENST00000330503 PCDHA12Q9UN75 941 aa19.07■□□□□ 0.64
DDX41-201ENST00000330503 SPDYE3A6NKU9 549 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 CBFA2T2O43439 604 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 OFD1O75665 1012 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 TRAF1Q13077 416 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 TRIM9Q9C026 710 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 KIAA1683Q9H0B3 1180 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 GPRC5DQ9NZD1 345 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 CTNND2Q9UQB3 1225 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 SYNRGQ9UMZ2 1314 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 COBLO75128 1261 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 RHOBTB3O94955 611 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 CDK11BP21127 795 aaKnown RBP19.06■□□□□ 0.64
DDX41-201ENST00000330503 PRCPP42785 496 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 Q4G0T1 1027 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 TMEM119Q4V9L6 283 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 ANGEL2Q5VTE6 544 aaKnown RBP19.06■□□□□ 0.64
DDX41-201ENST00000330503 PRAMEF18Q5VWM3 479 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 LENG9Q96B70 501 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 FEZ1Q99689 392 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 SPON1Q9HCB6 807 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 SPTLC3Q9NUV7 552 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 ZNF112Q9UJU3 913 aa19.06■□□□□ 0.64
DDX41-201ENST00000330503 FAM86B1E9PN63 330 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 MARCH6O60337 910 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 CYP3A4P08684 503 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 FAM86B2P0C5J1 330 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 LMNB1P20700 586 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 CIITAP33076 1130 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 DGKZQ13574 1117 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 CDKAL1Q5VV42 579 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 KRT79Q5XKE5 535 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 SAMD1Q6SPF0 538 aaPredicted RBP19.05■□□□□ 0.64
DDX41-201ENST00000330503 KCNK18Q7Z418 384 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 ETNPPLQ8TBG4 499 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 SNX29Q8TEQ0 813 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 RWDD2AQ9UIY3 292 aa19.05■□□□□ 0.64
DDX41-201ENST00000330503 HIRAP54198 1017 aaPredicted RBP19.04■□□□□ 0.64
DDX41-201ENST00000330503 SEMA3FQ13275 785 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 MCM6Q14566 821 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 APTXQ7Z2E3 356 aaKnown RBP19.04■□□□□ 0.64
DDX41-201ENST00000330503 LDHDQ86WU2 507 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 TEX2Q8IWB9 1127 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 ADSSL1Q8N142 457 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 STK17AQ9UEE5 414 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 EPS15P42566 896 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 DHX8Q14562 1220 aaKnown RBP19.04■□□□□ 0.64
DDX41-201ENST00000330503 PRR16Q569H4 304 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 SV2BQ7L1I2 683 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 FCHSD1Q86WN1 690 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 VSTM4Q8IW00 320 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 GPC2Q8N158 579 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 GIMAP8Q8ND71 665 aaPredicted RBP19.04■□□□□ 0.64
DDX41-201ENST00000330503 NELFBQ8WX92 580 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 RAD54LQ92698 747 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 MAPK8IP1Q9UQF2 711 aa19.04■□□□□ 0.64
DDX41-201ENST00000330503 MRPL11Q9Y3B7 192 aaKnown RBP19.04■□□□□ 0.64
DDX41-201ENST00000330503 DICER1Q9UPY3 1922 aaKnown RBP19.04■□□□□ 0.64
DDX41-201ENST00000330503 MYMKA6NI61 221 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 WDR46O15213 610 aaKnown RBP19.03■□□□□ 0.64
DDX41-201ENST00000330503 CFBP00751 764 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 GSDMDP57764 484 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 AMPD3Q01432 767 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 PTPN21Q16825 1174 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 HYIQ5T013 277 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 ARMCX5Q6P1M9 558 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 APOBEC3FQ8IUX4 373 aaKnown RBP19.03■□□□□ 0.64
DDX41-201ENST00000330503 CYP2W1Q8TAV3 490 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 LPAR1Q92633 364 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 FHDC1Q9C0D6 1143 aaPredicted RBP19.03■□□□□ 0.64
DDX41-201ENST00000330503 EMILIN3Q9NT22 766 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 ZNF536O15090 1300 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 GCOM1H8Y6P7 765 aaPredicted RBP19.03■□□□□ 0.64
DDX41-201ENST00000330503 POLR2MP0CAP2 368 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 CCZ1BP86790 482 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 CCZ1P86791 482 aaPredicted RBP19.03■□□□□ 0.64
DDX41-201ENST00000330503 PAK1Q13153 545 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 NR1I3Q14994 352 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 DCAF15Q66K64 600 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 SLFN12Q8IYM2 578 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 CDK5RAP3Q96JB5 506 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 AGBL1Q96MI9 1066 aa19.03■□□□□ 0.64
DDX41-201ENST00000330503 TBX3O15119 743 aa19.02■□□□□ 0.64
DDX41-201ENST00000330503 SPIRE1Q08AE8 756 aa19.02■□□□□ 0.64
DDX41-201ENST00000330503 PRPF38AQ8NAV1 312 aaKnown RBP19.02■□□□□ 0.64
DDX41-201ENST00000330503 LARP4BQ92615 738 aaKnown RBP19.02■□□□□ 0.64
DDX41-201ENST00000330503 SLF1Q9BQI6 1058 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms