RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 NFIBO00712 420 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 GCFC2P16383 781 aaKnown RBP20.78■□□□□ 0.92
USP39-201ENST00000323701 UBXN2AP68543 259 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 PRR16Q569H4 304 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 SULF1Q8IWU6 871 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 SMYD4Q8IYR2 804 aaPredicted RBP20.78■□□□□ 0.92
USP39-201ENST00000323701 RASSF8Q8NHQ8 419 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 ZFP91Q96JP5 570 aaPredicted RBP20.78■□□□□ 0.92
USP39-201ENST00000323701 PPP1R9AQ9ULJ8 1098 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 SNCAIPQ9Y6H5 919 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 GOLGA6L19H0YKK7 550 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 USP14P54578 494 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 FMR1Q06787 632 aaKnown RBP eCLIP20.78■□□□□ 0.923e-6■■■□□ 16.1
USP39-201ENST00000323701 DPY19L2Q6NUT2 758 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 MOB2Q70IA6 237 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 CLEC4DQ8WXI8 215 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 AFG3L2Q9Y4W6 797 aa20.78■□□□□ 0.92
USP39-201ENST00000323701 RLFQ13129 1914 aa20.77■□□□□ 0.92
USP39-201ENST00000323701 PARP14Q460N5 1801 aa20.77■□□□□ 0.92
USP39-201ENST00000323701 FOSP01100 380 aaPredicted RBP20.77■□□□□ 0.92
USP39-201ENST00000323701 GRB10Q13322 594 aa20.77■□□□□ 0.92
USP39-201ENST00000323701 ECM1Q16610 540 aa20.77■□□□□ 0.92
USP39-201ENST00000323701 NOL9Q5SY16 702 aaKnown RBP20.77■□□□□ 0.92
USP39-201ENST00000323701 ATG4CQ96DT6 458 aa20.77■□□□□ 0.92
USP39-201ENST00000323701 PNMA5Q96PV4 448 aa20.77■□□□□ 0.92
USP39-201ENST00000323701 HOMER2Q9NSB8 354 aa20.77■□□□□ 0.92
USP39-201ENST00000323701 MRPL11Q9Y3B7 192 aaKnown RBP20.77■□□□□ 0.92
USP39-201ENST00000323701 POTECB2RU33 542 aa20.76■□□□□ 0.91
USP39-201ENST00000323701 GCOM1H8Y6P7 765 aaPredicted RBP20.76■□□□□ 0.91
USP39-201ENST00000323701 POLR2MP0CAP2 368 aa20.76■□□□□ 0.91
USP39-201ENST00000323701 CD44P16070 742 aaKnown RBP20.76■□□□□ 0.91
USP39-201ENST00000323701 EPHX2P34913 555 aa20.76■□□□□ 0.91
USP39-201ENST00000323701 MUM1L1Q5H9M0 696 aa20.76■□□□□ 0.91
USP39-201ENST00000323701 SLC30A10Q6XR72 485 aa20.76■□□□□ 0.91
USP39-201ENST00000323701 ETNPPLQ8TBG4 499 aa20.76■□□□□ 0.91
USP39-201ENST00000323701 AS3MTQ9HBK9 375 aa20.76■□□□□ 0.91
USP39-201ENST00000323701 COL20A1Q9P218 1284 aa20.76■□□□□ 0.91
USP39-201ENST00000323701 ABCB11O95342 1321 aa20.76■□□□□ 0.91
USP39-201ENST00000323701 PLA2G4DQ86XP0 818 aa20.76■□□□□ 0.91
USP39-201ENST00000323701 TRIM44Q96DX7 344 aaPredicted RBP20.76■□□□□ 0.91
USP39-201ENST00000323701 KBTBD4Q9NVX7 518 aa20.76■□□□□ 0.91
USP39-201ENST00000323701 OTOFQ9HC10 1997 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 GTPBP6O43824 516 aaPredicted RBP20.75■□□□□ 0.91
USP39-201ENST00000323701 SMC2O95347 1197 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 STAT3P40763 770 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 PDIA5Q14554 519 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 TRIM5Q9C035 493 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 PCDHA12Q9UN75 941 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 PAPPA2Q9BXP8 1791 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 GLTPD2A6NH11 291 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 VWA5AO00534 786 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 ALAS1P13196 640 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 ZNF75DP51815 510 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 KCNK18Q7Z418 384 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 TRMT44Q8IYL2 757 aaKnown RBP20.75■□□□□ 0.91
USP39-201ENST00000323701 GSDMAQ96QA5 445 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 PYM1Q9BRP8 204 aaKnown RBP20.75■□□□□ 0.91
USP39-201ENST00000323701 BLOC1S4Q9NUP1 217 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 CCDC39Q9UFE4 941 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 RIPK3Q9Y572 518 aa20.75■□□□□ 0.91
USP39-201ENST00000323701 IGLV3-22A0A075B6J6 115 aa20.74■□□□□ 0.91
USP39-201ENST00000323701 ATP1A3P13637 1013 aa20.74■□□□□ 0.91
USP39-201ENST00000323701 CIITAP33076 1130 aa20.74■□□□□ 0.91
USP39-201ENST00000323701 TMEM266Q2M3C6 531 aa20.74■□□□□ 0.91
USP39-201ENST00000323701 MOXD1Q6UVY6 613 aa20.74■□□□□ 0.91
USP39-201ENST00000323701 SPC24Q8NBT2 197 aa20.74■□□□□ 0.91
USP39-201ENST00000323701 CLMNQ96JQ2 1002 aa20.74■□□□□ 0.91
USP39-201ENST00000323701 C12orf42Q96LP6 360 aa20.74■□□□□ 0.91
USP39-201ENST00000323701 CYP3A4P08684 503 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 MAP3K9P80192 1104 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 SPIRE1Q08AE8 756 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 TRAF1Q13077 416 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 Q4G0T1 1027 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 TRIML1Q8N9V2 468 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 MSH4O15457 936 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 MARCH6O60337 910 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 HSD17B4P51659 736 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 MCTP2Q6DN12 878 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 SARM1Q6SZW1 724 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 USP50Q70EL3 339 aaPredicted RBP20.73■□□□□ 0.91
USP39-201ENST00000323701 MLKLQ8NB16 471 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 SNX29Q8TEQ0 813 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 CDCA5Q96FF9 252 aa20.73■□□□□ 0.91
USP39-201ENST00000323701 COL11A1P12107 1806 aaPredicted RBP20.72■□□□□ 0.91
USP39-201ENST00000323701 IKBKBO14920 756 aa20.72■□□□□ 0.91
USP39-201ENST00000323701 POTEIP0CG38 1075 aa20.72■□□□□ 0.91
USP39-201ENST00000323701 POTEJP0CG39 1038 aa20.72■□□□□ 0.91
USP39-201ENST00000323701 DHX8Q14562 1220 aaKnown RBP20.72■□□□□ 0.91
USP39-201ENST00000323701 EAPPQ56P03 285 aaPredicted RBP20.72■□□□□ 0.91
USP39-201ENST00000323701 REPS2Q8NFH8 660 aa20.72■□□□□ 0.91
USP39-201ENST00000323701 CCDC34Q96HJ3 373 aa20.72■□□□□ 0.91
USP39-201ENST00000323701 NAP1L4Q99733 375 aaKnown RBP20.72■□□□□ 0.91
USP39-201ENST00000323701 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.72■□□□□ 0.91
USP39-201ENST00000323701 PPP1R3GB7ZBB8 358 aa20.72■□□□□ 0.91
USP39-201ENST00000323701 C19orf81C9J6K1 198 aa20.72■□□□□ 0.91
USP39-201ENST00000323701 KLRC4O43908 158 aa20.72■□□□□ 0.91
USP39-201ENST00000323701 COBLO75128 1261 aa20.72■□□□□ 0.91
USP39-201ENST00000323701 RPN1P04843 607 aaKnown RBP20.72■□□□□ 0.91
USP39-201ENST00000323701 MYL5Q02045 173 aa20.72■□□□□ 0.91
USP39-201ENST00000323701 HSP90AA4PQ58FG1 418 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms