RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 SREBF1P36956 1147 aa29.73■■■□□ 2.35
TM6SF1-202ENST00000322019 MYL5Q02045 173 aa29.73■■■□□ 2.35
TM6SF1-202ENST00000322019 GSDMAQ96QA5 445 aa29.73■■■□□ 2.35
TM6SF1-202ENST00000322019 MED15Q96RN5 788 aa29.73■■■□□ 2.35
TM6SF1-202ENST00000322019 PIK3CDO00329 1044 aa29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 HMGCS2P54868 508 aa29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 BACE1P56817 501 aa29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 DHX8Q14562 1220 aaKnown RBP29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 MLKLQ8NB16 471 aa29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 ZNF280CQ8ND82 737 aa29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 HOOK2Q96ED9 719 aa29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 WNK4Q96J92 1243 aa29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 ZFP91Q96JP5 570 aaPredicted RBP29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 IKBKBO14920 756 aa29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 GRB10Q13322 594 aa29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 KLHL10Q6JEL2 608 aa29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 RAVER2Q9HCJ3 691 aaKnown RBP29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 NRBP1Q9UHY1 535 aa29.72■■■□□ 2.35
TM6SF1-202ENST00000322019 SMTNL1A8MU46 457 aa29.71■■■□□ 2.35
TM6SF1-202ENST00000322019 FOSP01100 380 aaPredicted RBP29.71■■■□□ 2.35
TM6SF1-202ENST00000322019 DRC7Q8IY82 874 aa29.71■■■□□ 2.35
TM6SF1-202ENST00000322019 KCNMB3Q9NPA1 279 aa29.71■■■□□ 2.35
TM6SF1-202ENST00000322019 HOMER2Q9NSB8 354 aa29.71■■■□□ 2.35
TM6SF1-202ENST00000322019 FANCLQ9NW38 375 aa29.71■■■□□ 2.35
TM6SF1-202ENST00000322019 PCDHA12Q9UN75 941 aa29.71■■■□□ 2.35
TM6SF1-202ENST00000322019 PPP2R3BQ9Y5P8 575 aa29.71■■■□□ 2.35
TM6SF1-202ENST00000322019 CYP3A7-CYP3A51PA0A087WV96 503 aa29.7■■■□□ 2.35
TM6SF1-202ENST00000322019 GCOM1H8Y6P7 765 aaPredicted RBP29.7■■■□□ 2.35
TM6SF1-202ENST00000322019 ICAM1P05362 532 aa29.7■■■□□ 2.35
TM6SF1-202ENST00000322019 POLR2MP0CAP2 368 aa29.7■■■□□ 2.35
TM6SF1-202ENST00000322019 CYP3A7P24462 503 aa29.7■■■□□ 2.35
TM6SF1-202ENST00000322019 SNX29Q8TEQ0 813 aa29.7■■■□□ 2.35
TM6SF1-202ENST00000322019 LENG9Q96B70 501 aa29.7■■■□□ 2.35
TM6SF1-202ENST00000322019 PNMA5Q96PV4 448 aa29.7■■■□□ 2.35
TM6SF1-202ENST00000322019 WDR18Q9BV38 432 aa29.7■■■□□ 2.35
TM6SF1-202ENST00000322019 KBTBD4Q9NVX7 518 aa29.7■■■□□ 2.35
TM6SF1-202ENST00000322019 MRPL11Q9Y3B7 192 aaKnown RBP29.7■■■□□ 2.35
TM6SF1-202ENST00000322019 COBLO75128 1261 aa29.7■■■□□ 2.34
TM6SF1-202ENST00000322019 RPN1P04843 607 aaKnown RBP29.7■■■□□ 2.34
TM6SF1-202ENST00000322019 STAT3P40763 770 aa29.7■■■□□ 2.34
TM6SF1-202ENST00000322019 ECM1Q16610 540 aa29.7■■■□□ 2.34
TM6SF1-202ENST00000322019 MBOAT7Q96N66 472 aa29.7■■■□□ 2.34
TM6SF1-202ENST00000322019 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.7■■■□□ 2.34
TM6SF1-202ENST00000322019 NFIBO00712 420 aa29.69■■■□□ 2.34
TM6SF1-202ENST00000322019 USP2O75604 605 aaPredicted RBP29.69■■■□□ 2.34
TM6SF1-202ENST00000322019 SUPT20HL1Q3ZLR7 823 aa29.69■■■□□ 2.34
TM6SF1-202ENST00000322019 PDIA5Q14554 519 aa29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 DCPSQ96C86 337 aaKnown RBP29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 CALML4Q96GE6 196 aa29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 PPP1R9AQ9ULJ8 1098 aa29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 PITPNM2Q9BZ72 1349 aa29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 USP14P54578 494 aa29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 STX17P56962 302 aa29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 ETNPPLQ8TBG4 499 aa29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 NAP1L4Q99733 375 aaKnown RBP29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 RAB34Q9BZG1 259 aa29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 AS3MTQ9HBK9 375 aa29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 SLC38A10Q9HBR0 1119 aa29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 ABCB11O95342 1321 aa29.68■■■□□ 2.34
TM6SF1-202ENST00000322019 ALAS1P13196 640 aa29.67■■■□□ 2.34
TM6SF1-202ENST00000322019 TRAF1Q13077 416 aa29.67■■■□□ 2.34
TM6SF1-202ENST00000322019 SLC30A10Q6XR72 485 aa29.67■■■□□ 2.34
TM6SF1-202ENST00000322019 SULF1Q8IWU6 871 aa29.67■■■□□ 2.34
TM6SF1-202ENST00000322019 IFNKQ9P0W0 207 aa29.67■■■□□ 2.34
TM6SF1-202ENST00000322019 GDAQ9Y2T3 454 aa29.67■■■□□ 2.34
TM6SF1-202ENST00000322019 MCTP2Q6DN12 878 aa29.67■■■□□ 2.34
TM6SF1-202ENST00000322019 KCNK18Q7Z418 384 aa29.67■■■□□ 2.34
TM6SF1-202ENST00000322019 CNKSR2Q8WXI2 1034 aa29.67■■■□□ 2.34
TM6SF1-202ENST00000322019 ATG4CQ96DT6 458 aa29.67■■■□□ 2.34
TM6SF1-202ENST00000322019 BLOC1S4Q9NUP1 217 aa29.67■■■□□ 2.34
TM6SF1-202ENST00000322019 MAPK8IP1Q9UQF2 711 aa29.67■■■□□ 2.34
TM6SF1-202ENST00000322019 KRT79Q5XKE5 535 aa29.66■■■□□ 2.34
TM6SF1-202ENST00000322019 DACH1Q9UI36 760 aa29.66■■■□□ 2.34
TM6SF1-202ENST00000322019 NFE2L3Q9Y4A8 694 aa29.66■■■□□ 2.34
TM6SF1-202ENST00000322019 PHIPQ8WWQ0 1821 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 PPP1R3GB7ZBB8 358 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 ZNF76P36508 570 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 TPM4P67936 248 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 VGLL4Q14135 290 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 MUM1L1Q5H9M0 696 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 MOXD1Q6UVY6 613 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 KRT26Q7Z3Y9 468 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 CLEC4DQ8WXI8 215 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 CDK5RAP3Q96JB5 506 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 XPO4Q9C0E2 1151 aaKnown RBP29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 PTGS1P23219 599 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 MCM6Q14566 821 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 GPR162Q16538 588 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 Q4G0T1 1027 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 COL20A1Q9P218 1284 aa29.65■■■□□ 2.34
TM6SF1-202ENST00000322019 KLRC4O43908 158 aa29.64■■■□□ 2.34
TM6SF1-202ENST00000322019 CCDC144BQ3MJ40 725 aa29.64■■■□□ 2.34
TM6SF1-202ENST00000322019 KMT5BQ4FZB7 885 aa29.64■■■□□ 2.34
TM6SF1-202ENST00000322019 MRFAP1L1Q96HT8 127 aa29.64■■■□□ 2.34
TM6SF1-202ENST00000322019 ZKSCAN5Q9Y2L8 839 aa29.64■■■□□ 2.34
TM6SF1-202ENST00000322019 MSH4O15457 936 aa29.64■■■□□ 2.33
TM6SF1-202ENST00000322019 TRIM9Q9C026 710 aa29.64■■■□□ 2.33
TM6SF1-202ENST00000322019 SNCAIPQ9Y6H5 919 aa29.64■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms