RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 APOBRQ0VD83 1088 aa16.93■□□□□ 0.3
TUBA3D-201ENST00000321253 GNASQ5JWF2 1037 aa16.93■□□□□ 0.3
TUBA3D-201ENST00000321253 KLHDC9Q8NEP7 349 aa16.93■□□□□ 0.3
TUBA3D-201ENST00000321253 WDR11Q9BZH6 1224 aa16.93■□□□□ 0.3
TUBA3D-201ENST00000321253 GNEQ9Y223 722 aaKnown RBP16.93■□□□□ 0.3
TUBA3D-201ENST00000321253 CYP46A1Q9Y6A2 500 aa16.93■□□□□ 0.3
TUBA3D-201ENST00000321253 CCDC196A0A1B0GTZ2 297 aa16.92■□□□□ 0.3
TUBA3D-201ENST00000321253 MYADML2A6NDP7 307 aa16.92■□□□□ 0.3
TUBA3D-201ENST00000321253 MOXD2PA6NHM9 499 aa16.92■□□□□ 0.3
TUBA3D-201ENST00000321253 METAP2P50579 478 aaKnown RBP eCLIP16.92■□□□□ 0.3
TUBA3D-201ENST00000321253 ACLYP53396 1101 aa16.92■□□□□ 0.3
TUBA3D-201ENST00000321253 STXBP2Q15833 593 aa16.92■□□□□ 0.3
TUBA3D-201ENST00000321253 KCNA10Q16322 511 aa16.92■□□□□ 0.3
TUBA3D-201ENST00000321253 SLC39A5Q6ZMH5 540 aa16.92■□□□□ 0.3
TUBA3D-201ENST00000321253 RUFY3Q7L099 469 aa16.92■□□□□ 0.3
TUBA3D-201ENST00000321253 SCFD2Q8WU76 684 aa16.92■□□□□ 0.3
TUBA3D-201ENST00000321253 PXMP2Q9NR77 195 aa16.92■□□□□ 0.3
TUBA3D-201ENST00000321253 Q9Y3F1 56 aa16.92■□□□□ 0.3
TUBA3D-201ENST00000321253 A0A1W2PQ45 241 aaPredicted RBP16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 A0A1W2PQY0 241 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 hCG_1642624A0A1W2PR95 340 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 RBM47A0AV96 593 aaKnown RBP16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 DYNC1LI2O43237 492 aaPredicted RBP16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 PPP2R5BQ15173 497 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 DUSP28Q4G0W2 176 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 FCHSD1Q86WN1 690 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 FBXL16Q8N461 479 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 CUL5Q93034 780 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 TM6SF1Q9BZW5 370 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 ZSWIM6Q9HCJ5 1215 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 ATP11BQ9Y2G3 1177 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 ZEB2O60315 1214 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 NR3C2P08235 984 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 RTP1P59025 263 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 TTLL4Q14679 1199 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 HEATR3Q7Z4Q2 680 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 SMARCC2Q8TAQ2 1214 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 GLT1D1Q96MS3 346 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 STARD7Q9NQZ5 370 aa16.91■□□□□ 0.3
TUBA3D-201ENST00000321253 CNTNAP5Q8WYK1 1306 aa16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 NKRFO15226 690 aaKnown RBP eCLIP16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 ASGR1P07306 291 aa16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 NKX3-2P78367 333 aa16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 IRX5P78411 483 aaPredicted RBP16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 BEX3Q00994 111 aa16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 FSCN1Q16658 493 aaKnown RBP16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 CCSAPQ6IQ19 270 aaPredicted RBP16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 SEPT14Q6ZU15 432 aa16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 VTI1AQ96AJ9 217 aa16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 PDCD2LQ9BRP1 358 aa16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 AGXT2Q9BYV1 514 aa16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 UPF3BQ9BZI7 483 aaKnown RBP16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 ZMYND8Q9ULU4 1186 aaPredicted RBP16.9■□□□□ 0.3
TUBA3D-201ENST00000321253 EIF3JO75822 258 aaKnown RBP16.89■□□□□ 0.29
TUBA3D-201ENST00000321253 TXNP10599 105 aaKnown RBP16.89■□□□□ 0.29
TUBA3D-201ENST00000321253 MYCLP12524 364 aaPredicted RBP16.89■□□□□ 0.29
TUBA3D-201ENST00000321253 PTGS1P23219 599 aa16.89■□□□□ 0.29
TUBA3D-201ENST00000321253 CDC27P30260 824 aa16.89■□□□□ 0.29
TUBA3D-201ENST00000321253 SNX17Q15036 470 aa16.89■□□□□ 0.29
TUBA3D-201ENST00000321253 TRIM60Q495X7 471 aa16.89■□□□□ 0.29
TUBA3D-201ENST00000321253 TMEM63BQ5T3F8 832 aa16.89■□□□□ 0.29
TUBA3D-201ENST00000321253 OR6J1Q8NGC5 347 aa16.89■□□□□ 0.29
TUBA3D-201ENST00000321253 PSTPIP2Q9H939 334 aa16.89■□□□□ 0.29
TUBA3D-201ENST00000321253 PRKAG2Q9UGJ0 569 aa16.89■□□□□ 0.29
TUBA3D-201ENST00000321253 CTAGE5O15320 804 aa16.88■□□□□ 0.29
TUBA3D-201ENST00000321253 SYN1P17600 705 aa16.88■□□□□ 0.29
TUBA3D-201ENST00000321253 ANAPC15P60006 121 aa16.88■□□□□ 0.29
TUBA3D-201ENST00000321253 PGM5Q15124 567 aa16.88■□□□□ 0.29
TUBA3D-201ENST00000321253 BRDTQ58F21 947 aaPredicted RBP16.88■□□□□ 0.29
TUBA3D-201ENST00000321253 C1orf53Q5VUE5 145 aa16.88■□□□□ 0.29
TUBA3D-201ENST00000321253 GPKOWQ92917 476 aaPredicted RBP eCLIP16.88■□□□□ 0.29
TUBA3D-201ENST00000321253 FAM217BQ9NTX9 383 aaPredicted RBP16.88■□□□□ 0.29
TUBA3D-201ENST00000321253 V9GY48 417 aaPredicted RBP16.88■□□□□ 0.29
TUBA3D-201ENST00000321253 ELP1O95163 1332 aa16.88■□□□□ 0.29
TUBA3D-201ENST00000321253 PIK3CDO00329 1044 aa16.87■□□□□ 0.29
TUBA3D-201ENST00000321253 CCND2P30279 289 aa16.87■□□□□ 0.29
TUBA3D-201ENST00000321253 ADD1P35611 737 aaKnown RBP16.87■□□□□ 0.29
TUBA3D-201ENST00000321253 CPT1AP50416 773 aa16.87■□□□□ 0.29
TUBA3D-201ENST00000321253 FUT2Q10981 343 aa16.87■□□□□ 0.29
TUBA3D-201ENST00000321253 USP17L6PQ6QN14 398 aa16.87■□□□□ 0.29
TUBA3D-201ENST00000321253 CHRDL2Q6WN34 429 aa16.87■□□□□ 0.29
TUBA3D-201ENST00000321253 PDRG1Q9NUG6 133 aa16.87■□□□□ 0.29
TUBA3D-201ENST00000321253 NID2Q14112 1375 aa16.87■□□□□ 0.29
TUBA3D-201ENST00000321253 hCG_1984214I3L0E3 225 aa16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 CABYRO75952 493 aa16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 NAPAP54920 295 aa16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 TOB2Q14106 344 aaPredicted RBP16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 WWC2Q6AWC2 1192 aa16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 PPP1R18Q6NYC8 613 aa16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 CXCL17Q6UXB2 119 aa16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 VSIG10LQ86VR7 867 aa16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 ZNF713Q8N859 430 aaPredicted RBP16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 MRVI1Q9Y6F6 885 aa16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 DNAH12Q6ZR08 3092 aa16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 KIAA1217Q5T5P2 1943 aa16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 A0A0U1RQG5 324 aaPredicted RBP16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 MEIS2O14770 477 aa16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 PQBP1O60828 265 aaKnown RBP16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 ARIH2O95376 493 aa16.86■□□□□ 0.29
TUBA3D-201ENST00000321253 PDIA3P30101 505 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms