RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 MAP4K1Q92918 833 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 CSRNP1Q96S65 589 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 ABCB6Q9NP58 842 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 UGGT2Q9NYU1 1516 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 SGO2Q562F6 1265 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 KRT80Q6KB66 452 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 CCHCR1Q8TD31 782 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 P2RX5Q93086 422 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 TRIM56Q9BRZ2 755 aaKnown RBP14.88□□□□□ -0.03
CLCN6-201ENST00000312413 KLRF2D3W0D1 207 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 IL1RL1Q01638 556 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 VSTM4Q8IW00 320 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 FOXP1Q9H334 677 aaPredicted RBP14.88□□□□□ -0.03
CLCN6-201ENST00000312413 ANAPC5Q9UJX4 755 aa14.88□□□□□ -0.03
CLCN6-201ENST00000312413 MED23Q9ULK4 1368 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 PDE6AP16499 860 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 MFAP3P55082 362 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 MAN2A1Q16706 1144 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.87□□□□□ -0.03
CLCN6-201ENST00000312413 C19orf44Q9H6X5 657 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 NOP53Q9NZM5 478 aaKnown RBP14.87□□□□□ -0.03
CLCN6-201ENST00000312413 SOWAHDA6NJG2 315 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 RASGRF2O14827 1237 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 CXCR5P32302 372 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 TRAPPC10P48553 1259 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 EIF4A1P60842 406 aaKnown RBP14.87□□□□□ -0.03
CLCN6-201ENST00000312413 MYL7Q01449 175 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 NME8Q8N427 588 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 TBC1D22AQ8WUA7 517 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 CHURC1Q8WUH1 139 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 GPKOWQ92917 476 aaPredicted RBP eCLIP14.87□□□□□ -0.03
CLCN6-201ENST00000312413 TRIM11Q96F44 468 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 UHRF1BP1Q6BDS2 1440 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 SLCO1A2P46721 670 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 TMED1Q13445 227 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 XKR9Q5GH70 373 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 ZBTB8OSQ8IWT0 167 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 ZNF518AQ6AHZ1 1483 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 LAD1O00515 517 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 ENOX1Q8TC92 643 aaKnown RBP14.87□□□□□ -0.03
CLCN6-201ENST00000312413 PACSIN2Q9UNF0 486 aaPredicted RBP14.87□□□□□ -0.03
CLCN6-201ENST00000312413 IVNS1ABPQ9Y6Y0 642 aa14.87□□□□□ -0.03
CLCN6-201ENST00000312413 ESYT2A0FGR8 921 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 COBLO75128 1261 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 EMBQ6PCB8 327 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 TADA2BQ86TJ2 420 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 TSC22D3Q99576 134 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 SMYD2Q9NRG4 433 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 NR2F2P24468 414 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 CUL4AQ13619 759 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 ADCK5Q3MIX3 580 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 ICE2Q659A1 982 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 POMGNT1Q8WZA1 660 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 GLG1Q92896 1179 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 RCOR1Q9UKL0 485 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 MT-ND3P03897 115 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 RAPH1Q70E73 1250 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 NT5C1BQ96P26 610 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 EIF2AQ9BY44 585 aaKnown RBP14.86□□□□□ -0.03
CLCN6-201ENST00000312413 ORC6Q9Y5N6 252 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 MOCS3O95396 460 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 FTCDO95954 541 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 ST13P4Q8IZP2 240 aaPredicted RBP14.86□□□□□ -0.03
CLCN6-201ENST00000312413 IPO11Q9UI26 975 aaKnown RBP14.86□□□□□ -0.03
CLCN6-201ENST00000312413 EDC4Q6P2E9 1401 aaKnown RBP14.86□□□□□ -0.03
CLCN6-201ENST00000312413 GNGT2O14610 69 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 MAPK4P31152 587 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 ZBED6P86452 979 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 TCP10Q12799 353 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 PTPN21Q16825 1174 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 ZNF653Q96CK0 615 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 PANX2Q96RD6 677 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 MMS19Q96T76 1030 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 CENPKQ9BS16 269 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 CARMIL3Q8ND23 1372 aa14.86□□□□□ -0.03
CLCN6-201ENST00000312413 CHUKO15111 745 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 NDUFA10O95299 355 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 ESRRAP11474 423 aaPredicted RBP14.85□□□□□ -0.03
CLCN6-201ENST00000312413 ITKQ08881 620 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 GNPTABQ3T906 1256 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 ZNF658Q5TYW1 1059 aaPredicted RBP14.85□□□□□ -0.03
CLCN6-201ENST00000312413 TBC1D1Q86TI0 1168 aaPredicted RBP14.85□□□□□ -0.03
CLCN6-201ENST00000312413 HACE1Q8IYU2 909 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 DCLK2Q8N568 766 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 PIP4K2CQ8TBX8 421 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 LARP4BQ92615 738 aaKnown RBP14.85□□□□□ -0.03
CLCN6-201ENST00000312413 STK17AQ9UEE5 414 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 STAP2Q9UGK3 403 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 NCKAP5LQ9HCH0 1330 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 RFX6Q8HWS3 928 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 SMYD4Q8IYR2 804 aaPredicted RBP14.85□□□□□ -0.03
CLCN6-201ENST00000312413 MCUQ8NE86 351 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 FMO2Q99518 471 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 MAN1B1Q9UKM7 699 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 TRAPPC8Q9Y2L5 1435 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 SOS2Q07890 1332 aaPredicted RBP14.85□□□□□ -0.03
CLCN6-201ENST00000312413 A6NJR5 290 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 AFPP02771 609 aaKnown RBP14.85□□□□□ -0.03
CLCN6-201ENST00000312413 TMEM191BP0C7N4 346 aa14.85□□□□□ -0.03
CLCN6-201ENST00000312413 SNX1Q13596 522 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms