RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 KLRC4O43908 158 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 HOXA13P31271 388 aaPredicted RBP23.9■■□□□ 1.42
ATG4D-201ENST00000309469 STX17P56962 302 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 KMT5BQ4FZB7 885 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 HSP90AA4PQ58FG1 418 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 TMC6Q7Z403 805 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 NAP1L5Q96NT1 182 aaPredicted RBP23.9■■□□□ 1.42
ATG4D-201ENST00000309469 C7orf25Q9BPX7 421 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 KCNMB3Q9NPA1 279 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 FBXO28Q9NVF7 368 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 STK17AQ9UEE5 414 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 AMPD3Q01432 767 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 NOLC1Q14978 699 aaKnown RBP eCLIP23.9■■□□□ 1.42
ATG4D-201ENST00000309469 SNX29Q8TEQ0 813 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 CDK5RAP3Q96JB5 506 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 SPON1Q9HCB6 807 aa23.9■■□□□ 1.42
ATG4D-201ENST00000309469 GSDMDP57764 484 aa23.89■■□□□ 1.42
ATG4D-201ENST00000309469 ARID5BQ14865 1188 aa23.89■■□□□ 1.42
ATG4D-201ENST00000309469 GJA10Q969M2 543 aa23.89■■□□□ 1.42
ATG4D-201ENST00000309469 NUDT12Q9BQG2 462 aa23.89■■□□□ 1.42
ATG4D-201ENST00000309469 TRIM9Q9C026 710 aa23.89■■□□□ 1.42
ATG4D-201ENST00000309469 KIAA1683Q9H0B3 1180 aa23.89■■□□□ 1.42
ATG4D-201ENST00000309469 CTNND2Q9UQB3 1225 aa23.89■■□□□ 1.42
ATG4D-201ENST00000309469 RHOBTB3O94955 611 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 LMNB1P20700 586 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 ANGEL2Q5VTE6 544 aaKnown RBP23.88■■□□□ 1.41
ATG4D-201ENST00000309469 DCAF15Q66K64 600 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 C17orf53Q8N3J3 647 aaPredicted RBP23.88■■□□□ 1.41
ATG4D-201ENST00000309469 LPAR1Q92633 364 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 BLOC1S4Q9NUP1 217 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 GPRC5DQ9NZD1 345 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 RWDD2AQ9UIY3 292 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 GDAQ9Y2T3 454 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 MRPL11Q9Y3B7 192 aaKnown RBP23.88■■□□□ 1.41
ATG4D-201ENST00000309469 MYH7BA7E2Y1 1941 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 INPP5BP32019 993 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 Q4G0T1 1027 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 SV2BQ7L1I2 683 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 APOBEC3FQ8IUX4 373 aaKnown RBP23.88■■□□□ 1.41
ATG4D-201ENST00000309469 SLFN12Q8IYM2 578 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 GPC2Q8N158 579 aa23.88■■□□□ 1.41
ATG4D-201ENST00000309469 WDR46O15213 610 aaKnown RBP23.87■■□□□ 1.41
ATG4D-201ENST00000309469 CIITAP33076 1130 aa23.87■■□□□ 1.41
ATG4D-201ENST00000309469 SAMD1Q6SPF0 538 aaPredicted RBP23.87■■□□□ 1.41
ATG4D-201ENST00000309469 TRPM4Q8TD43 1214 aa23.87■■□□□ 1.41
ATG4D-201ENST00000309469 GCOM1H8Y6P7 765 aaPredicted RBP23.86■■□□□ 1.41
ATG4D-201ENST00000309469 CFBP00751 764 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 POLR2MP0CAP2 368 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 PRCPP42785 496 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 PAK1Q13153 545 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 TMEM119Q4V9L6 283 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 PRR16Q569H4 304 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 CCDC47Q96A33 483 aaKnown RBP23.86■■□□□ 1.41
ATG4D-201ENST00000309469 HOOK2Q96ED9 719 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 SPTLC3Q9NUV7 552 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 TBX3O15119 743 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 CYP3A4P08684 503 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 DHX8Q14562 1220 aaKnown RBP23.86■■□□□ 1.41
ATG4D-201ENST00000309469 CDKAL1Q5VV42 579 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 FCHSD1Q86WN1 690 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 LDHDQ86WU2 507 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 ADSSL1Q8N142 457 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 GIMAP8Q8ND71 665 aaPredicted RBP23.86■■□□□ 1.41
ATG4D-201ENST00000309469 ETNPPLQ8TBG4 499 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 NELFBQ8WX92 580 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 TBC1D5Q92609 795 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 LARP4BQ92615 738 aaKnown RBP23.86■■□□□ 1.41
ATG4D-201ENST00000309469 INTS13Q9NVM9 706 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 ABCB11O95342 1321 aa23.86■■□□□ 1.41
ATG4D-201ENST00000309469 FAM86B1E9PN63 330 aa23.85■■□□□ 1.41
ATG4D-201ENST00000309469 FAM86B2P0C5J1 330 aa23.85■■□□□ 1.41
ATG4D-201ENST00000309469 ASIC1P78348 528 aa23.85■■□□□ 1.41
ATG4D-201ENST00000309469 MCM6Q14566 821 aa23.85■■□□□ 1.41
ATG4D-201ENST00000309469 VSTM4Q8IW00 320 aa23.85■■□□□ 1.41
ATG4D-201ENST00000309469 PRPF38AQ8NAV1 312 aaKnown RBP23.85■■□□□ 1.41
ATG4D-201ENST00000309469 RAD54LQ92698 747 aa23.85■■□□□ 1.41
ATG4D-201ENST00000309469 ZNF112Q9UJU3 913 aa23.85■■□□□ 1.41
ATG4D-201ENST00000309469 MAPK8IP1Q9UQF2 711 aa23.85■■□□□ 1.41
ATG4D-201ENST00000309469 ATAD5Q96QE3 1844 aa23.84■■□□□ 1.41
ATG4D-201ENST00000309469 TPD52L1Q16890 204 aaPredicted RBP23.84■■□□□ 1.41
ATG4D-201ENST00000309469 LENG9Q96B70 501 aa23.84■■□□□ 1.41
ATG4D-201ENST00000309469 UIMC1Q96RL1 719 aa23.84■■□□□ 1.41
ATG4D-201ENST00000309469 ECM1Q16610 540 aa23.84■■□□□ 1.41
ATG4D-201ENST00000309469 HYIQ5T013 277 aa23.84■■□□□ 1.41
ATG4D-201ENST00000309469 SLF1Q9BQI6 1058 aa23.84■■□□□ 1.41
ATG4D-201ENST00000309469 SLC26A4O43511 780 aa23.83■■□□□ 1.41
ATG4D-201ENST00000309469 ICAM1P05362 532 aa23.83■■□□□ 1.41
ATG4D-201ENST00000309469 CCT6AP40227 531 aaKnown RBP23.83■■□□□ 1.41
ATG4D-201ENST00000309469 PDE4DQ08499 809 aa23.83■■□□□ 1.41
ATG4D-201ENST00000309469 PRAMEF18Q5VWM3 479 aa23.83■■□□□ 1.41
ATG4D-201ENST00000309469 SCYL3Q8IZE3 742 aa23.83■■□□□ 1.41
ATG4D-201ENST00000309469 CCDC150Q8NCX0 1101 aa23.83■■□□□ 1.41
ATG4D-201ENST00000309469 GTPBP4Q9BZE4 634 aaKnown RBP23.83■■□□□ 1.41
ATG4D-201ENST00000309469 FHDC1Q9C0D6 1143 aaPredicted RBP23.83■■□□□ 1.41
ATG4D-201ENST00000309469 EXOC1Q9NV70 894 aa23.83■■□□□ 1.41
ATG4D-201ENST00000309469 KDM3AQ9Y4C1 1321 aa23.83■■□□□ 1.41
ATG4D-201ENST00000309469 MYMKA6NI61 221 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 COBLO75128 1261 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 ZNF76P36508 570 aa23.82■■□□□ 1.4
ATG4D-201ENST00000309469 EPS15P42566 896 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms