RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 PRKAG3Q9UGI9 489 aa14.08□□□□□ -0.16
SMIM4-201ENST00000307106 FAM50BQ9Y247 325 aa14.08□□□□□ -0.16
SMIM4-201ENST00000307106 ABHD14A-ACY1A0A1B0GW23 586 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 C19orf67A6NJJ6 358 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 ST18O60284 1047 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 SELPP16109 830 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 SLC1A4P43007 532 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 ZSCAN25Q6NSZ9 544 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 FAM117BQ6P1L5 589 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 MRPL38Q96DV4 380 aaKnown RBP14.07□□□□□ -0.16
SMIM4-201ENST00000307106 STRBPQ96SI9 672 aaKnown RBP14.07□□□□□ -0.16
SMIM4-201ENST00000307106 HAUS7Q99871 368 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 C17orf80Q9BSJ5 609 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 ZNF287Q9HBT7 754 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 CTNNA3Q9UI47 895 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 CCPG1Q9ULG6 757 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 PLIN4Q96Q06 1357 aa14.07□□□□□ -0.16
SMIM4-201ENST00000307106 CFAP54Q96N23 3096 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 A6NJR5 290 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 GSG1L2A8MUP6 293 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 NKRFO15226 690 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMIM4-201ENST00000307106 NBNO60934 754 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 PARNO95453 639 aaKnown RBP14.06□□□□□ -0.16
SMIM4-201ENST00000307106 CXCL10P02778 98 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 ATP5JP18859 108 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 PPP2R5BQ15173 497 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 PTPROQ16827 1216 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 TCTN1Q2MV58 587 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 TIGD5Q53EQ6 642 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 GIMAP6Q6P9H5 292 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 EP400NLQ6ZTU2 488 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 ADHFE1Q8IWW8 467 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 PABPC5Q96DU9 382 aaKnown RBP14.06□□□□□ -0.16
SMIM4-201ENST00000307106 GMCL1Q96IK5 515 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 CTAGE1Q96RT6 745 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 UPF3BQ9BZI7 483 aaKnown RBP14.06□□□□□ -0.16
SMIM4-201ENST00000307106 PRR12Q9ULL5 1215 aa14.06□□□□□ -0.16
SMIM4-201ENST00000307106 LOC102724159A0A0B4J2E5 919 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 PLA2G6O60733 806 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 EFCAB14O75071 495 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 TSPY3P0CV98 308 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 TSPY8P0CW00 308 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 RLBP1P12271 317 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 MCCP23508 829 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 IRS1P35568 1242 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 BAATQ14032 418 aaPredicted RBP14.05□□□□□ -0.16
SMIM4-201ENST00000307106 IKBKEQ14164 716 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 PWP2Q15269 919 aaKnown RBP14.05□□□□□ -0.16
SMIM4-201ENST00000307106 GDF6Q6KF10 455 aaPredicted RBP14.05□□□□□ -0.16
SMIM4-201ENST00000307106 KCTD1Q719H9 257 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 BANK1Q8NDB2 785 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 PRSS33Q8NF86 280 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 COPS5Q92905 334 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 INSL6Q9Y581 213 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 ZDBF2Q9HCK1 2354 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 PLXNA3P51805 1871 aa14.05□□□□□ -0.16
SMIM4-201ENST00000307106 ICAM1P05362 532 aa14.04□□□□□ -0.16
SMIM4-201ENST00000307106 CKBP12277 381 aa14.04□□□□□ -0.16
SMIM4-201ENST00000307106 TDO2P48775 406 aa14.04□□□□□ -0.16
SMIM4-201ENST00000307106 PTPN5P54829 565 aa14.04□□□□□ -0.16
SMIM4-201ENST00000307106 TCEAL5Q5H9L2 206 aa14.04□□□□□ -0.16
SMIM4-201ENST00000307106 NEDD1Q8NHV4 660 aa14.04□□□□□ -0.16
SMIM4-201ENST00000307106 SCFD2Q8WU76 684 aa14.04□□□□□ -0.16
SMIM4-201ENST00000307106 DHX38Q92620 1227 aaKnown RBP14.04□□□□□ -0.16
SMIM4-201ENST00000307106 MUTYHQ9UIF7 546 aa14.04□□□□□ -0.16
SMIM4-201ENST00000307106 PTPDC1A2A3K4 754 aa14.03□□□□□ -0.16
SMIM4-201ENST00000307106 NFIBO00712 420 aa14.03□□□□□ -0.16
SMIM4-201ENST00000307106 PDE4DQ08499 809 aa14.03□□□□□ -0.16
SMIM4-201ENST00000307106 RBL2Q08999 1139 aa14.03□□□□□ -0.16
SMIM4-201ENST00000307106 EPC2Q52LR7 807 aa14.03□□□□□ -0.16
SMIM4-201ENST00000307106 RCSD1Q6JBY9 416 aa14.03□□□□□ -0.16
SMIM4-201ENST00000307106 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMIM4-201ENST00000307106 SESTD1Q86VW0 696 aa14.03□□□□□ -0.16
SMIM4-201ENST00000307106 EPB41L4AQ9HCS5 686 aaPredicted RBP14.03□□□□□ -0.16
SMIM4-201ENST00000307106 CLDND1Q9NY35 253 aa14.03□□□□□ -0.16
SMIM4-201ENST00000307106 COL4A6Q14031 1691 aa14.03□□□□□ -0.16
SMIM4-201ENST00000307106 KAT6AQ92794 2004 aa14.03□□□□□ -0.16
SMIM4-201ENST00000307106 KIAA1671Q9BY89 1806 aa14.02□□□□□ -0.16
SMIM4-201ENST00000307106 RBAK-RBAKDNI3L0D1 243 aa14.02□□□□□ -0.17
SMIM4-201ENST00000307106 TXNP10599 105 aaKnown RBP14.02□□□□□ -0.17
SMIM4-201ENST00000307106 CALML3P27482 149 aa14.02□□□□□ -0.17
SMIM4-201ENST00000307106 TFAP4Q01664 338 aa14.02□□□□□ -0.17
SMIM4-201ENST00000307106 COL19A1Q14993 1142 aa14.02□□□□□ -0.17
SMIM4-201ENST00000307106 HERC4Q5GLZ8 1057 aaPredicted RBP14.02□□□□□ -0.17
SMIM4-201ENST00000307106 IER5LQ5T953 404 aa14.02□□□□□ -0.17
SMIM4-201ENST00000307106 SLC30A10Q6XR72 485 aa14.02□□□□□ -0.17
SMIM4-201ENST00000307106 RASGRP2Q7LDG7 609 aa14.02□□□□□ -0.17
SMIM4-201ENST00000307106 SAMD11Q96NU1 681 aa14.02□□□□□ -0.17
SMIM4-201ENST00000307106 MPHOSPH6Q99547 160 aaKnown RBP14.02□□□□□ -0.17
SMIM4-201ENST00000307106 POP1Q99575 1024 aaKnown RBP14.02□□□□□ -0.17
SMIM4-201ENST00000307106 NSUN3Q9H649 340 aaKnown RBP14.02□□□□□ -0.17
SMIM4-201ENST00000307106 H3BNC9 293 aa14.01□□□□□ -0.17
SMIM4-201ENST00000307106 AMHP03971 560 aa14.01□□□□□ -0.17
SMIM4-201ENST00000307106 HTRA4P83105 476 aaPredicted RBP14.01□□□□□ -0.17
SMIM4-201ENST00000307106 PDE4BQ07343 736 aa14.01□□□□□ -0.17
SMIM4-201ENST00000307106 GPM6BQ13491 265 aa14.01□□□□□ -0.17
SMIM4-201ENST00000307106 SMAD2Q15796 467 aaKnown RBP14.01□□□□□ -0.17
SMIM4-201ENST00000307106 BMP8AQ7Z5Y6 402 aa14.01□□□□□ -0.17
SMIM4-201ENST00000307106 RNF135Q8IUD6 432 aa14.01□□□□□ -0.17
SMIM4-201ENST00000307106 MYOCDQ8IZQ8 938 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms