RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 BMP3P12645 472 aa17.46■□□□□ 0.38
USP42-201ENST00000306177 NR2F2P24468 414 aa17.46■□□□□ 0.38
USP42-201ENST00000306177 FAM170AA1A519 330 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 POMGNT1Q8WZA1 660 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 FTOQ9C0B1 505 aaKnown RBP eCLIP17.45■□□□□ 0.38
USP42-201ENST00000306177 RASSF4Q9H2L5 321 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 I3L4J1 428 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 TMOD1P28289 359 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 GUCY2FP51841 1108 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 MYL7Q01449 175 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 RESTQ13127 1097 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 C11orf57Q6ZUT1 292 aaPredicted RBP17.45■□□□□ 0.38
USP42-201ENST00000306177 DYNLL2Q96FJ2 89 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 GDF11O95390 407 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 INPP5BP32019 993 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 SLC16A2P36021 539 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 STRBPQ96SI9 672 aaKnown RBP17.45■□□□□ 0.38
USP42-201ENST00000306177 ZNF215Q9UL58 517 aaPredicted RBP17.45■□□□□ 0.38
USP42-201ENST00000306177 IFNB1P01574 187 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 KRT81Q14533 505 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 RETREG2Q8NC44 543 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 LMTK2Q8IWU2 1503 aa17.45■□□□□ 0.38
USP42-201ENST00000306177 CCDC160A6NGH7 325 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 RGS16O15492 202 aaPredicted RBP17.44■□□□□ 0.38
USP42-201ENST00000306177 PPFIA4O75335 1185 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 PPP2R5AQ15172 486 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 VSIG1Q86XK7 387 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 MMS19Q96T76 1030 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 DDX23Q9BUQ8 820 aaKnown RBP17.44■□□□□ 0.38
USP42-201ENST00000306177 MAN1B1Q9UKM7 699 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 SRPRBQ9Y5M8 271 aaKnown RBP17.44■□□□□ 0.38
USP42-201ENST00000306177 POLR2BP30876 1174 aaKnown RBP17.44■□□□□ 0.38
USP42-201ENST00000306177 EEF2KMTQ96G04 330 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 PI4KBQ9UBF8 816 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 LAMC1P11047 1609 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 GIPC1O14908 333 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 PSMC2P35998 433 aaKnown RBP17.44■□□□□ 0.38
USP42-201ENST00000306177 ARHGAP25P42331 645 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 NEDD9Q14511 834 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 PGBD1Q96JS3 809 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 HESX1Q9UBX0 185 aa17.44■□□□□ 0.38
USP42-201ENST00000306177 HNRNPDLO14979 420 aaKnown RBP17.43■□□□□ 0.38
USP42-201ENST00000306177 NPR1P16066 1061 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 NSFP46459 744 aaKnown RBP17.43■□□□□ 0.38
USP42-201ENST00000306177 ANKFY1Q9P2R3 1169 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 ADCY8P40145 1251 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 MFAP3P55082 362 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 TPD52P55327 224 aaPredicted RBP17.43■□□□□ 0.38
USP42-201ENST00000306177 BPIFB4P59827 614 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 UBXN2AP68543 259 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 KCTD2Q14681 263 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 CEP85LQ5SZL2 805 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 SMYD4Q8IYR2 804 aaPredicted RBP17.43■□□□□ 0.38
USP42-201ENST00000306177 SYNE4Q8N205 404 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 NARFQ9UHQ1 456 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 LMNB1P20700 586 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 STAT2P52630 851 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 MAN2A1Q16706 1144 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 FAM47CQ5HY64 1035 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 USP17L2Q6R6M4 530 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 SRGAP1Q7Z6B7 1085 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 COA7Q96BR5 231 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 PPP1R13BQ96KQ4 1090 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 BRIP1Q9BX63 1249 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 RABEP2Q9H5N1 569 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 SETD1BQ9UPS6 1966 aaKnown RBP17.43■□□□□ 0.38
USP42-201ENST00000306177 COBLO75128 1261 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 SARNPP82979 210 aaKnown RBP17.43■□□□□ 0.38
USP42-201ENST00000306177 TFDP1Q14186 410 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 CCDC62Q6P9F0 684 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 GPR101Q96P66 508 aaPredicted RBP17.43■□□□□ 0.38
USP42-201ENST00000306177 MED10Q9BTT4 135 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 SEPT9Q9UHD8 586 aaPredicted RBP17.43■□□□□ 0.38
USP42-201ENST00000306177 PYCARDQ9ULZ3 195 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 TTLL3Q9Y4R7 772 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 CDHR2Q9BYE9 1310 aa17.43■□□□□ 0.38
USP42-201ENST00000306177 PIK3CAP42336 1068 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 FKBP3Q00688 224 aaKnown RBP17.42■□□□□ 0.38
USP42-201ENST00000306177 SYDE2Q5VT97 1194 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 SCYL2Q6P3W7 929 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 PALM2Q8IXS6 379 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 PLCD3Q8N3E9 789 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 NT5C1BQ96P26 610 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 NACC1Q96RE7 527 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 COL15A1P39059 1388 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 AFPP02771 609 aaKnown RBP17.42■□□□□ 0.38
USP42-201ENST00000306177 MMP10P09238 476 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 CYP19A1P11511 503 aaPredicted RBP17.42■□□□□ 0.38
USP42-201ENST00000306177 PTK2Q05397 1052 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 GKAP1Q5VSY0 366 aaPredicted RBP17.42■□□□□ 0.38
USP42-201ENST00000306177 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.42■□□□□ 0.38
USP42-201ENST00000306177 ATP2A3Q93084 1043 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 RSRC1Q96IZ7 334 aaKnown RBP17.42■□□□□ 0.38
USP42-201ENST00000306177 ZNF131P52739 623 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 PTPROQ16827 1216 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 GRAMD1CQ8IYS0 662 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 NRBP1Q9UHY1 535 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 RWDD2AQ9UIY3 292 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 SNAP23O00161 211 aa17.42■□□□□ 0.38
USP42-201ENST00000306177 PHBP35232 272 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms