RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 USP14P54578 494 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 EPHB1P54762 984 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 PODNQ7Z5L7 613 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 YIPF2Q9BWQ6 316 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 ZCWPW1Q9H0M4 648 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 PAXBP1Q9Y5B6 917 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.54□□□□□ -1.04
SCN9A-201ENST00000303354 GTPBP6O43824 516 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-201ENST00000303354 PFKFB1P16118 471 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 PRDX5P30044 214 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 TFDP1Q14186 410 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 MMP19Q99542 508 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 ZWILCHQ9H900 591 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 TMEM260Q9NX78 707 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 ATP5JP18859 108 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 VAV2P52735 878 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 GRAPQ13588 217 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 KDELC2Q7Z4H8 507 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 PASD1Q8IV76 773 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 GRAPLQ8TC17 118 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-201ENST00000303354 AFG1LQ8WV93 481 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 POC1B-GALNT4F8VUJ3 575 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 CDK8P49336 464 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 SCRN1Q12765 414 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 SZRD1Q7Z422 152 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 SLFN12Q8IYM2 578 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 RTKN2Q8IZC4 609 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 CELF1Q92879 486 aaKnown RBP8.54□□□□□ -1.04
SCN9A-201ENST00000303354 GJB4Q9NTQ9 266 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 ADCY9O60503 1353 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 GSPT1P15170 499 aaKnown RBP8.54□□□□□ -1.04
SCN9A-201ENST00000303354 ADCK5Q3MIX3 580 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 CCDC121Q6ZUS5 278 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 RHPN2Q8IUC4 686 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 CCDC170Q8IYT3 715 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 AMNQ9BXJ7 453 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 ATG3Q9NT62 314 aa8.54□□□□□ -1.04
SCN9A-201ENST00000303354 CDC37Q16543 378 aaPredicted RBP8.53□□□□□ -1.04
SCN9A-201ENST00000303354 SH2D4BQ5SQS7 431 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 PGBD3Q8N328 593 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 TRPC7Q9HCX4 862 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 KCNJ18B7U540 433 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 MNAT1P51948 309 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 KCNJ12Q14500 433 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 SEPT2Q15019 361 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 HADHQ16836 314 aaKnown RBP8.53□□□□□ -1.04
SCN9A-201ENST00000303354 SLC7A5P2Q9GIP4 190 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 USP28Q96RU2 1077 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 NAPGQ99747 312 aaPredicted RBP8.53□□□□□ -1.04
SCN9A-201ENST00000303354 ANGPTL3Q9Y5C1 460 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 ACTN1P12814 892 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 ANXA13P27216 316 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 STAT1P42224 750 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 PSMC5P62195 406 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 IRX4P78413 519 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 TWF2Q6IBS0 349 aaKnown RBP8.53□□□□□ -1.04
SCN9A-201ENST00000303354 CNGA4Q8IV77 575 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 RBM46Q8TBY0 533 aaKnown RBP8.53□□□□□ -1.04
SCN9A-201ENST00000303354 SLC7A3Q8WY07 619 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 ATP6V1E2Q96A05 226 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 STK38LQ9Y2H1 464 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 HMBSP08397 361 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 NSUN2Q08J23 767 aaKnown RBP eCLIP8.53□□□□□ -1.04
SCN9A-201ENST00000303354 NR5A1Q13285 461 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 CATSPER4Q7RTX7 472 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 PI4KBQ9UBF8 816 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 ZNF148Q9UQR1 794 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 TRAPPC10P48553 1259 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 FBXW4P57775 412 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 RPS6KA1Q15418 735 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 VWA3BQ502W6 1294 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 SNRNP48Q6IEG0 339 aaKnown RBP8.53□□□□□ -1.04
SCN9A-201ENST00000303354 WDR48Q8TAF3 677 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 DBNLQ9UJU6 430 aaKnown RBP8.53□□□□□ -1.04
SCN9A-201ENST00000303354 FAM184BQ9ULE4 1060 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 ITM2BQ9Y287 266 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 PLEKHA8P1O95397 391 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 TFRCP02786 760 aaKnown RBP8.53□□□□□ -1.04
SCN9A-201ENST00000303354 LZTS2Q9BRK4 669 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 AXIN2Q9Y2T1 843 aa8.53□□□□□ -1.04
SCN9A-201ENST00000303354 MOCS2O96007 188 aaPredicted RBP8.52□□□□□ -1.04
SCN9A-201ENST00000303354 GJD4Q96KN9 370 aaPredicted RBP8.52□□□□□ -1.04
SCN9A-201ENST00000303354 ADD3Q9UEY8 706 aaKnown RBP8.52□□□□□ -1.04
SCN9A-201ENST00000303354 USP17L5A8MUK1 530 aa8.52□□□□□ -1.05
SCN9A-201ENST00000303354 WDR46O15213 610 aaKnown RBP8.52□□□□□ -1.05
SCN9A-201ENST00000303354 RPN1P04843 607 aaKnown RBP8.52□□□□□ -1.05
SCN9A-201ENST00000303354 NDUFA8P51970 172 aa8.52□□□□□ -1.05
SCN9A-201ENST00000303354 CFAP36Q96G28 342 aa8.52□□□□□ -1.05
SCN9A-201ENST00000303354 LRRC4Q9HBW1 653 aa8.52□□□□□ -1.05
SCN9A-201ENST00000303354 SERPINB13Q9UIV8 391 aa8.52□□□□□ -1.05
SCN9A-201ENST00000303354 MRPS25P82663 173 aaKnown RBP8.52□□□□□ -1.05
SCN9A-201ENST00000303354 RASSF7Q02833 373 aa8.52□□□□□ -1.05
SCN9A-201ENST00000303354 CERKQ8TCT0 537 aa8.52□□□□□ -1.05
SCN9A-201ENST00000303354 DSCC1Q9BVC3 393 aa8.52□□□□□ -1.05
SCN9A-201ENST00000303354 EFCC1Q9HA90 598 aa8.52□□□□□ -1.05
SCN9A-201ENST00000303354 SPON1Q9HCB6 807 aa8.52□□□□□ -1.05
SCN9A-201ENST00000303354 UBE2TQ9NPD8 197 aaPredicted RBP8.52□□□□□ -1.05
SCN9A-201ENST00000303354 SAMD15Q9P1V8 674 aa8.52□□□□□ -1.05
SCN9A-201ENST00000303354 BBOX1O75936 387 aa8.52□□□□□ -1.05
SCN9A-201ENST00000303354 IL6STP40189 918 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms