RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ERVK-24P63145 666 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 USP17L24Q0WX57 530 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 USP17L6PQ6QN14 398 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 FAM212AQ96EL1 285 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 ATP8A2Q9NTI2 1148 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 FAM217BQ9NTX9 383 aaPredicted RBP14.67□□□□□ -0.06
CASC4-201ENST00000299957 THRAP3Q9Y2W1 955 aaKnown RBP14.67□□□□□ -0.06
CASC4-201ENST00000299957 PCDHA13Q9Y5I0 950 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 REREQ9P2R6 1566 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 USP17L5A8MUK1 530 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 SPOPO43791 374 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 SLCO1A2P46721 670 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 ZBED6P86452 979 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 PAK2Q13177 524 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 DPH6Q7L8W6 267 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 INTS13Q9NVM9 706 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 NR2F2P24468 414 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 EEF1GP26641 437 aaKnown RBP14.67□□□□□ -0.06
CASC4-201ENST00000299957 TUBB2AQ13885 445 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 WDR78Q5VTH9 848 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 LRRC1Q9BTT6 524 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 TUBB2BQ9BVA1 445 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 DNAJC17Q9NVM6 304 aaKnown RBP14.67□□□□□ -0.06
CASC4-201ENST00000299957 ARMCX3Q9UH62 379 aaPredicted RBP14.67□□□□□ -0.06
CASC4-201ENST00000299957 HPSEQ9Y251 543 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 PCDHA1Q9Y5I3 950 aa14.67□□□□□ -0.06
CASC4-201ENST00000299957 LGALS16A8MUM7 142 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 CSF1RP07333 972 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 TNFAIP3P21580 790 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 IFI16Q16666 785 aaKnown RBP14.66□□□□□ -0.06
CASC4-201ENST00000299957 PPM1EQ8WY54 764 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 EXOC3O60645 756 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 TUBB4BP68371 445 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 MSL1Q68DK7 614 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 LACRTQ9GZZ8 138 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 DNM3Q9UQ16 869 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 PXDNLA1KZ92 1463 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 NCAPD2Q15021 1401 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 FRMD3A2A2Y4 597 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 GCOM1H8Y6P7 765 aaPredicted RBP14.66□□□□□ -0.06
CASC4-201ENST00000299957 MYZAPP0CAP1 466 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 EPB41P11171 864 aaKnown RBP14.66□□□□□ -0.06
CASC4-201ENST00000299957 GBP2P32456 591 aaPredicted RBP14.66□□□□□ -0.06
CASC4-201ENST00000299957 PPP1R7Q15435 360 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 MED4Q9NPJ6 270 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 E9PMD0 336 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 WNT7AO00755 349 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 DPYDQ12882 1025 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 PFKFB3Q16875 520 aaPredicted RBP14.66□□□□□ -0.06
CASC4-201ENST00000299957 ANKRD42Q8N9B4 389 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 DDX12PQ92771 950 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 FUT8Q9BYC5 575 aa14.66□□□□□ -0.06
CASC4-201ENST00000299957 XRCC5P13010 732 aaKnown RBP14.65□□□□□ -0.06
CASC4-201ENST00000299957 TCP1P17987 556 aaKnown RBP14.65□□□□□ -0.06
CASC4-201ENST00000299957 CTNNA2P26232 953 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 HOXA13P31271 388 aaPredicted RBP14.65□□□□□ -0.06
CASC4-201ENST00000299957 AGXT2Q9BYV1 514 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 SERPINA10Q9UK55 444 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 PREX1Q8TCU6 1659 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 A0A1W2PRG0 241 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 PRPF6O94906 941 aaKnown RBP14.65□□□□□ -0.06
CASC4-201ENST00000299957 GDF11O95390 407 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 EZH2Q15910 746 aaKnown RBP14.65□□□□□ -0.06
CASC4-201ENST00000299957 ZNF579Q8NAF0 562 aaKnown RBP14.65□□□□□ -0.06
CASC4-201ENST00000299957 CCDC127Q96BQ5 260 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 SH2D3AQ9BRG2 576 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 NBPF3Q9H094 633 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 PRM3Q9NNZ6 103 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 PTPN22Q9Y2R2 807 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 EIF3CLB5ME19 914 aaKnown RBP14.65□□□□□ -0.06
CASC4-201ENST00000299957 PPP1R3GB7ZBB8 358 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 UBAP1LF5GYI3 381 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 KRT5P13647 590 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 ATP2C1P98194 919 aaPredicted RBP14.65□□□□□ -0.06
CASC4-201ENST00000299957 NNTQ13423 1086 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 EIF3CQ99613 913 aaKnown RBP14.65□□□□□ -0.06
CASC4-201ENST00000299957 TACO1Q9BSH4 297 aaKnown RBP14.65□□□□□ -0.06
CASC4-201ENST00000299957 BAIAP2L1Q9UHR4 511 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 ATP8A1Q9Y2Q0 1164 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 ATP6V0A2Q9Y487 856 aa14.65□□□□□ -0.06
CASC4-201ENST00000299957 MYO5BQ9ULV0 1848 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 CCDC169A6NNP5 214 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 PLCG2P16885 1265 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 TBC1D9BQ66K14 1250 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 FOXR1Q6PIV2 292 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 GSTA5Q7RTV2 222 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 MKRN1Q9UHC7 482 aaKnown RBP14.64□□□□□ -0.07
CASC4-201ENST00000299957 KDM6AO15550 1401 aaPredicted RBP14.64□□□□□ -0.07
CASC4-201ENST00000299957 MEGF6O75095 1541 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 XDHP47989 1333 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 STAT3P40763 770 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 CDK8P49336 464 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 E2F5Q15329 346 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 NPHP3-ACAD11A0A0J9YXS1 232 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 PALMO75781 387 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 GFPT2O94808 682 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 KRT14P02533 472 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 PMS1P54277 932 aaKnown RBP14.64□□□□□ -0.07
CASC4-201ENST00000299957 CEP95Q96GE4 821 aa14.64□□□□□ -0.07
CASC4-201ENST00000299957 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms