RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 OCMP0CE72 109 aaPredicted RBP12.76□□□□□ -0.37
SNIP1-201ENST00000296215 MAGEA1P43355 309 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 ANKRD44Q8N8A2 993 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 CCSER2Q9H7U1 834 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 SYNPO2Q9UMS6 1093 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 TRIM17Q9Y577 477 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 PCDHGA3Q9Y5H0 932 aa12.76□□□□□ -0.37
SNIP1-201ENST00000296215 TPD52P55327 224 aaPredicted RBP12.75□□□□□ -0.37
SNIP1-201ENST00000296215 KIF22Q14807 665 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 C16orf72Q14CZ0 275 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 C11orf74Q86VG3 221 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 TNIP2Q8NFZ5 429 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 LBHD1Q9BQE6 289 aaPredicted RBP12.75□□□□□ -0.37
SNIP1-201ENST00000296215 VPS37BQ9H9H4 285 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 SNX14Q9Y5W7 946 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 UBN2Q6ZU65 1347 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 A6NJR5 290 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
SNIP1-201ENST00000296215 NLRP6P59044 892 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 ZMYM1Q5SVZ6 1142 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 KRT80Q6KB66 452 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 CFAP36Q96G28 342 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 TSNARE1Q96NA8 513 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 HAUS8Q9BT25 410 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 ARHGEF9O43307 516 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 STRNO43815 780 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 DAB1O75553 588 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 PYGMP11217 842 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 CASP14P31944 242 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 TRPC3Q13507 836 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 IFIH1Q9BYX4 1025 aaKnown RBP12.75□□□□□ -0.37
SNIP1-201ENST00000296215 ANKZF1Q9H8Y5 726 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 WDR35Q9P2L0 1181 aa12.75□□□□□ -0.37
SNIP1-201ENST00000296215 TBC1D12O60347 775 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 PMS1P54277 932 aaKnown RBP12.74□□□□□ -0.37
SNIP1-201ENST00000296215 CDR2Q01850 454 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 BTKQ06187 659 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 GATAD2AQ86YP4 633 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 SCUBE1Q8IWY4 988 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 MMRN2Q9H8L6 949 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 ZNF229Q9UJW7 825 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 GIPC1O14908 333 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 CYTH3O43739 400 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 TMOD1P28289 359 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 KRT2P35908 639 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 AARSP49588 968 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNIP1-201ENST00000296215 COPS2P61201 443 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 CETN1Q12798 172 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 SCAIQ8N9R8 606 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 PIGOQ8TEQ8 1089 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 VMP1Q96GC9 406 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 ASCC2Q9H1I8 757 aaPredicted RBP12.74□□□□□ -0.37
SNIP1-201ENST00000296215 SUN2Q9UH99 717 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 RBM8AQ9Y5S9 174 aaKnown RBP12.74□□□□□ -0.37
SNIP1-201ENST00000296215 STK24Q9Y6E0 443 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 FYCO1Q9BQS8 1478 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 EIF3BP55884 814 aaKnown RBP12.74□□□□□ -0.37
SNIP1-201ENST00000296215 IL9RQ01113 521 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 WASHC5Q12768 1159 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 WASHC4Q2M389 1173 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 CROCCP3Q8IVE0 287 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 ARL8AQ96BM9 186 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 LRRC37BQ96QE4 947 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 ATXN2Q99700 1313 aaKnown RBP12.74□□□□□ -0.37
SNIP1-201ENST00000296215 LDHCP07864 332 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 BCRP11274 1271 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 TRPC1P48995 793 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 GALK1P51570 392 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 HDAC4P56524 1084 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 AP2B1P63010 937 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 USH1GQ495M9 461 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 TTC30AQ86WT1 665 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 HAUS7Q99871 368 aa12.74□□□□□ -0.37
SNIP1-201ENST00000296215 MRPL46Q9H2W6 279 aaKnown RBP12.74□□□□□ -0.37
SNIP1-201ENST00000296215 NESP48681 1621 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 GUCY1B2O75343 617 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 PDIA5Q14554 519 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 TTC39AQ5SRH9 613 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 ADALQ6DHV7 355 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 RBBP8NLQ8NC74 664 aaPredicted RBP12.73□□□□□ -0.37
SNIP1-201ENST00000296215 ARHGAP45Q92619 1136 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 DPH5Q9H2P9 285 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 F8VZ95 297 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 H0YC42 278 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 DDX5P17844 614 aaKnown RBP12.73□□□□□ -0.37
SNIP1-201ENST00000296215 TFAP4Q01664 338 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 KIF23Q02241 960 aaPredicted RBP12.73□□□□□ -0.37
SNIP1-201ENST00000296215 RBL2Q08999 1139 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 MMEL1Q495T6 779 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 CENPOQ9BU64 300 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 HMG20BQ9P0W2 317 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 ADGRG1Q9Y653 693 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 NUTM2FA1L443 756 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 TAF4O00268 1085 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 ZIM3Q96PE6 472 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 GPCPD1Q9NPB8 672 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 ATAD3AQ9NVI7 634 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 GMEB1Q9Y692 573 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 MATN2O00339 956 aa12.73□□□□□ -0.37
SNIP1-201ENST00000296215 ZPR1O75312 459 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms