RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 HLA-CQ95604 372 aa12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 FSD1Q9BTV5 496 aa12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 FRMPD2Q68DX3 1309 aaPredicted RBP12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 KIF28PB7ZC32 967 aa12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 CHMP4BP1P59074 171 aa12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 PDE4DQ08499 809 aa12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 PPP2R5BQ15173 497 aa12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 BRDTQ58F21 947 aaPredicted RBP12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 SYDE2Q5VT97 1194 aa12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 NFRKBQ6P4R8 1299 aa12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 TMCO2Q7Z6W1 182 aaPredicted RBP12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 MIER1Q8N108 512 aa12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 DCAF4Q8WV16 495 aa12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.382e-6■■■■□ 19.4
NSMCE2-201ENST00000287437 DCTPP1Q9H773 170 aa12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 NOD1Q9Y239 953 aa12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 HCN4Q9Y3Q4 1203 aa12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 TANC1Q9C0D5 1861 aa12.68□□□□□ -0.38
NSMCE2-201ENST00000287437 RAD50Q92878 1312 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 LOC102724159A0A0B4J2E5 919 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 LCHNA4D1U4 455 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 A6NJR5 290 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 LPXNO60711 386 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 NOVP48745 357 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 BFSP2Q13515 415 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 PWP2Q15269 919 aaKnown RBP12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 TMEM31Q5JXX7 168 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 BTNL9Q6UXG8 535 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 PI4K2BQ8TCG2 481 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 OTUD7AQ8TE49 926 aaPredicted RBP12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 SCFD2Q8WU76 684 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 CLEC4DQ8WXI8 215 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 GPCPD1Q9NPB8 672 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 COL4A4P53420 1690 aaPredicted RBP12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 SCN10AQ9Y5Y9 1956 aa12.67□□□□□ -0.38
NSMCE2-201ENST00000287437 FAM86C2PA6NEL3 165 aa12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 RBAK-RBAKDNI3L0D1 243 aa12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 NKRFO15226 690 aaKnown RBP eCLIP12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 BAIAP3O94812 1187 aa12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 ARIH2O95376 493 aa12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 TXNP10599 105 aaKnown RBP12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 EDNRBP24530 442 aa12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 KCNJ6P48051 423 aa12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 RPS6P62753 249 aaKnown RBP12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 PTPN11Q06124 597 aaPredicted RBP12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 VPS53Q5VIR6 699 aa12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 RNF207Q6ZRF8 634 aa12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 GDPD5Q8WTR4 605 aa12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 C11orf16Q9NQ32 467 aa12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 TOMM22Q9NS69 142 aa12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 RCAN3Q9UKA8 241 aa12.66□□□□□ -0.38
NSMCE2-201ENST00000287437 TTC41PQ6P2S7 1318 aa12.65□□□□□ -0.38
NSMCE2-201ENST00000287437 KPNA6O60684 536 aa12.65□□□□□ -0.38
NSMCE2-201ENST00000287437 WDR5P61964 334 aaKnown RBP12.65□□□□□ -0.38
NSMCE2-201ENST00000287437 GPNMBQ14956 572 aa12.65□□□□□ -0.38
NSMCE2-201ENST00000287437 PTGISQ16647 500 aa12.65□□□□□ -0.38
NSMCE2-201ENST00000287437 RRP12Q5JTH9 1297 aaKnown RBP12.65□□□□□ -0.38
NSMCE2-201ENST00000287437 CTAGE1Q96RT6 745 aa12.65□□□□□ -0.38
NSMCE2-201ENST00000287437 TMEM47Q9BQJ4 181 aa12.65□□□□□ -0.38
NSMCE2-201ENST00000287437 ANAPC4Q9UJX5 808 aa12.65□□□□□ -0.38
NSMCE2-201ENST00000287437 MTUS1Q9ULD2 1270 aa12.65□□□□□ -0.38
NSMCE2-201ENST00000287437 ORC4O43929 436 aa12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 PDHBP11177 359 aa12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 TOP1P11387 765 aaKnown RBP12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 DEFB103AP81534 67 aa12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 GDF6Q6KF10 455 aaPredicted RBP12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 CCDC155Q8N6L0 562 aa12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 DNERQ8NFT8 737 aa12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 CAGE1Q8TC20 777 aa12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 AFG1LQ8WV93 481 aa12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 MPHOSPH6Q99547 160 aaKnown RBP12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 ZBED2Q9BTP6 218 aa12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 CD320Q9NPF0 282 aa12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 ARIH1Q9Y4X5 557 aaPredicted RBP12.64□□□□□ -0.39
NSMCE2-201ENST00000287437 PTPRSQ13332 1948 aa12.63□□□□□ -0.39
NSMCE2-201ENST00000287437 FGRP09769 529 aa12.63□□□□□ -0.39
NSMCE2-201ENST00000287437 SELPP16109 830 aa12.63□□□□□ -0.39
NSMCE2-201ENST00000287437 TCTN1Q2MV58 587 aa12.63□□□□□ -0.39
NSMCE2-201ENST00000287437 LRRC8DQ7L1W4 858 aa12.63□□□□□ -0.39
NSMCE2-201ENST00000287437 TET1Q8NFU7 2136 aa12.63□□□□□ -0.39
NSMCE2-201ENST00000287437 AFAP1L1Q8TED9 768 aa12.63□□□□□ -0.39
NSMCE2-201ENST00000287437 DHX38Q92620 1227 aaKnown RBP12.63□□□□□ -0.39
NSMCE2-201ENST00000287437 WDR19Q8NEZ3 1342 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 GPR37L1O60883 481 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 NBNO60934 754 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 MMP3P08254 477 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 MX1P20591 662 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 ZNF543Q08ER8 600 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 LY6KQ17RY6 165 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 USH1GQ495M9 461 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 CCDC62Q6P9F0 684 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 CNKSR3Q6P9H4 555 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 CHST3Q7LGC8 479 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 KAT2BQ92831 832 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 SUGCTQ9HAC7 445 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 LMCD1Q9NZU5 365 aa12.62□□□□□ -0.39
NSMCE2-201ENST00000287437 B4DLN1 442 aa12.61□□□□□ -0.39
NSMCE2-201ENST00000287437 PI4K2BG5E9Z4 385 aa12.61□□□□□ -0.39
NSMCE2-201ENST00000287437 GJB5O95377 273 aa12.61□□□□□ -0.39
NSMCE2-201ENST00000287437 CKBP12277 381 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms