RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 SPDYE2Q495Y8 402 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 MCTP2Q6DN12 878 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 PIK3AP1Q6ZUJ8 805 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 C17orf50Q8WW18 174 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 TSC1Q92574 1164 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 RRP36Q96EU6 259 aaKnown RBP8.48□□□□□ -1.05
TRIM42-201ENST00000286349 POLR3CQ9BUI4 534 aaPredicted RBP8.48□□□□□ -1.05
TRIM42-201ENST00000286349 IQCGQ9H095 443 aaKnown RBP8.48□□□□□ -1.05
TRIM42-201ENST00000286349 KCNF1Q9H3M0 494 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 TPX2Q9ULW0 747 aaKnown RBP8.48□□□□□ -1.05
TRIM42-201ENST00000286349 PCDHA5Q9Y5H7 936 aa8.48□□□□□ -1.05
TRIM42-201ENST00000286349 hCG_1642624A0A1W2PR95 340 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 KLRF2D3W0D1 207 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 BIN1O00499 593 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 ACTN4O43707 911 aaKnown RBP8.47□□□□□ -1.05
TRIM42-201ENST00000286349 SLURP2P0DP57 97 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 LMOD1P29536 600 aaPredicted RBP8.47□□□□□ -1.05
TRIM42-201ENST00000286349 RWDD2BP57060 319 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 GABPAQ06546 454 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 SLC4A8Q2Y0W8 1093 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 ASPRV1Q53RT3 343 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 GJC2Q5T442 439 aaPredicted RBP8.47□□□□□ -1.05
TRIM42-201ENST00000286349 C16orf87Q6PH81 154 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 SH3BP5LQ7L8J4 393 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 CDAN1Q8IWY9 1227 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 IQCF2Q8IXL9 164 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 SAMD3Q8N6K7 520 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 CCDC150Q8NCX0 1101 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 SPATA20Q8TB22 786 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 EHD4Q9H223 541 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 METTL14Q9HCE5 456 aaKnown RBP8.47□□□□□ -1.05
TRIM42-201ENST00000286349 C6orf50Q9HD87 102 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 SERTAD1Q9UHV2 236 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 WDR90Q96KV7 1748 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 MYH1P12882 1939 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 CNTNAP1P78357 1384 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 ANKRD62A6NC57 917 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 TMCO5BA8MYB1 307 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 CREB3O43889 395 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 NPM3O75607 178 aaKnown RBP8.47□□□□□ -1.05
TRIM42-201ENST00000286349 VEGFAP15692 232 aaPredicted RBP8.47□□□□□ -1.05
TRIM42-201ENST00000286349 ERCC5P28715 1186 aaPredicted RBP8.47□□□□□ -1.05
TRIM42-201ENST00000286349 TRPC1P48995 793 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 CCDC15Q0P6D6 951 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 PTGDRQ13258 359 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 NCAPHQ15003 741 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 ZNF174Q15697 407 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 TSNAXIP1Q2TAA8 658 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 ANGEL2Q5VTE6 544 aaKnown RBP8.47□□□□□ -1.05
TRIM42-201ENST00000286349 USP50Q70EL3 339 aaPredicted RBP8.47□□□□□ -1.05
TRIM42-201ENST00000286349 KRT25Q7Z3Z0 450 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 STAG2Q8N3U4 1231 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 IQUBQ8NA54 791 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 SLC44A5Q8NCS7 719 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 CCDC17Q96LX7 622 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 GSDMAQ96QA5 445 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 IDI2Q9BXS1 227 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 ZMYND12Q9H0C1 365 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 OSBPL5Q9H0X9 879 aaPredicted RBP8.47□□□□□ -1.05
TRIM42-201ENST00000286349 DHX36Q9H2U1 1008 aaKnown RBP8.47□□□□□ -1.05
TRIM42-201ENST00000286349 SERPINB13Q9UIV8 391 aa8.47□□□□□ -1.05
TRIM42-201ENST00000286349 ESYT2A0FGR8 921 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 TCP10L2B9ZVM9 353 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 M0R2N6 131 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 STXBP3O00186 592 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 IMPDH2P12268 514 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 PRPHP41219 470 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 APLP1P51693 650 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 MORC3Q14149 939 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 NOM1Q5C9Z4 860 aaKnown RBP8.46□□□□□ -1.05
TRIM42-201ENST00000286349 EARS2Q5JPH6 523 aaKnown RBP8.46□□□□□ -1.05
TRIM42-201ENST00000286349 SPECC1Q5M775 1068 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 FMNL3Q8IVF7 1028 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 LRRC8AQ8IWT6 810 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 SMCR8Q8TEV9 937 aaPredicted RBP8.46□□□□□ -1.05
TRIM42-201ENST00000286349 SYMPKQ92797 1274 aaKnown RBP8.46□□□□□ -1.05
TRIM42-201ENST00000286349 CEP95Q96GE4 821 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 CPSF2Q9P2I0 782 aaKnown RBP8.46□□□□□ -1.05
TRIM42-201ENST00000286349 PUF60Q9UHX1 559 aaKnown RBP8.46□□□□□ -1.05
TRIM42-201ENST00000286349 MAN1B1Q9UKM7 699 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 BLOC1S6Q9UL45 172 aa8.46□□□□□ -1.05
TRIM42-201ENST00000286349 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.46□□□□□ -1.05
TRIM42-201ENST00000286349 KIF5CO60282 957 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 TTLL1O95922 423 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 MYL1P05976 194 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 CYP2C19P33261 490 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 GRIN1Q05586 938 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 PRAMEF18Q5VWM3 479 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 PPP1R18Q6NYC8 613 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 HEATR3Q7Z4Q2 680 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 SH3RF1Q7Z6J0 888 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 EFCAB13Q8IY85 973 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 ENOX1Q8TC92 643 aaKnown RBP8.46□□□□□ -1.06
TRIM42-201ENST00000286349 AGBL1Q96MI9 1066 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 SH3GL3Q99963 347 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 MTMR4Q9NYA4 1195 aa8.46□□□□□ -1.06
TRIM42-201ENST00000286349 IGKV6D-41A0A0C4DH26 115 aa8.45□□□□□ -1.06
TRIM42-201ENST00000286349 VWA3AA6NCI4 1184 aa8.45□□□□□ -1.06
TRIM42-201ENST00000286349 IQCA1LA6NCM1 817 aa8.45□□□□□ -1.06
TRIM42-201ENST00000286349 FAM205CA6NFA0 338 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms