RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 RNF187Q5TA31 235 aaPredicted RBP20.69■□□□□ 0.9
SSC4D-201ENST00000275560 NAA35Q5VZE5 725 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 ALS2CLQ60I27 953 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 ZSCAN29Q8IWY8 852 aaPredicted RBP20.69■□□□□ 0.9
SSC4D-201ENST00000275560 CNPY4Q8N129 248 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 CENPHQ9H3R5 247 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 NLRC4Q9NPP4 1024 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.69■□□□□ 0.9
SSC4D-201ENST00000275560 LRP5O75197 1615 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 A0A0G2JS52 829 aa20.68■□□□□ 0.9
SSC4D-201ENST00000275560 HDLBPQ00341 1268 aaKnown RBP20.68■□□□□ 0.9
SSC4D-201ENST00000275560 ENOX2Q16206 610 aaKnown RBP20.68■□□□□ 0.9
SSC4D-201ENST00000275560 POTEDQ86YR6 584 aa20.68■□□□□ 0.9
SSC4D-201ENST00000275560 CAVIN3Q969G5 261 aa20.68■□□□□ 0.9
SSC4D-201ENST00000275560 NDST4Q9H3R1 872 aa20.68■□□□□ 0.9
SSC4D-201ENST00000275560 CD248Q9HCU0 757 aa20.68■□□□□ 0.9
SSC4D-201ENST00000275560 KIAA0754O94854 1291 aa20.68■□□□□ 0.9
SSC4D-201ENST00000275560 HPDP32754 393 aaPredicted RBP20.68■□□□□ 0.9
SSC4D-201ENST00000275560 PRPF38AQ8NAV1 312 aaKnown RBP20.68■□□□□ 0.9
SSC4D-201ENST00000275560 GLIS3Q8NEA6 775 aa20.68■□□□□ 0.9
SSC4D-201ENST00000275560 NOC3LQ8WTT2 800 aaKnown RBP20.68■□□□□ 0.9
SSC4D-201ENST00000275560 JPH2Q9BR39 696 aaPredicted RBP20.68■□□□□ 0.9
SSC4D-201ENST00000275560 A0A1W2PQJ5 194 aa20.68■□□□□ 0.9
SSC4D-201ENST00000275560 VWA3BQ502W6 1294 aa20.68■□□□□ 0.9
SSC4D-201ENST00000275560 KRT12Q99456 494 aa20.68■□□□□ 0.9
SSC4D-201ENST00000275560 CARD10Q9BWT7 1032 aa20.68■□□□□ 0.9
SSC4D-201ENST00000275560 BRIP1Q9BX63 1249 aa20.68■□□□□ 0.9
SSC4D-201ENST00000275560 BICDL2A1A5D9 508 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 CALML3P27482 149 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 TECP42680 631 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 CDK17Q00537 523 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 LETM2Q2VYF4 491 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 TDRD12Q587J7 1177 aaKnown RBP20.67■□□□□ 0.9
SSC4D-201ENST00000275560 DYMQ7RTS9 669 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 IQCKQ8N0W5 287 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 ANKRD36CQ5JPF3 1778 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 BACH1O14867 736 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 MEFVO15553 781 aaPredicted RBP20.67■□□□□ 0.9
SSC4D-201ENST00000275560 GOLGA8HP0CJ92 632 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 CCDC91Q7Z6B0 441 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 CASKIN2Q8WXE0 1202 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 CCSER1Q9C0I3 900 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 KANSL2Q9H9L4 492 aa20.67■□□□□ 0.9
SSC4D-201ENST00000275560 M0R2N6 131 aa20.66■□□□□ 0.9
SSC4D-201ENST00000275560 KLRK1P26718 216 aa20.66■□□□□ 0.9
SSC4D-201ENST00000275560 ITIH3Q06033 890 aa20.66■□□□□ 0.9
SSC4D-201ENST00000275560 ZNF473Q8WTR7 871 aaKnown RBP20.66■□□□□ 0.9
SSC4D-201ENST00000275560 CACNA1SQ13698 1873 aa20.66■□□□□ 0.9
SSC4D-201ENST00000275560 FGRP09769 529 aa20.66■□□□□ 0.9
SSC4D-201ENST00000275560 PRLRP16471 622 aa20.66■□□□□ 0.9
SSC4D-201ENST00000275560 NR1D1P20393 614 aa20.66■□□□□ 0.9
SSC4D-201ENST00000275560 LRRC41Q15345 812 aa20.66■□□□□ 0.9
SSC4D-201ENST00000275560 FAM114A1Q8IWE2 563 aa20.66■□□□□ 0.9
SSC4D-201ENST00000275560 OR2W6PQ8NHA6 318 aa20.66■□□□□ 0.9
SSC4D-201ENST00000275560 DCP1AQ9NPI6 582 aaPredicted RBP20.66■□□□□ 0.9
SSC4D-201ENST00000275560 CYTH3O43739 400 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 CCNT1O60563 726 aaKnown RBP20.65■□□□□ 0.9
SSC4D-201ENST00000275560 ARID5AQ03989 594 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 IFT88Q13099 833 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 DNAAF5Q86Y56 855 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 BAP1Q92560 729 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 TAF1P21675 1872 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 PALMO75781 387 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 FIGNQ5HY92 759 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 PAXIP1Q6ZW49 1069 aaPredicted RBP20.65■□□□□ 0.9
SSC4D-201ENST00000275560 B4GALNT4Q76KP1 1039 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 MAATS1Q7Z4T9 603 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 DYNLL2Q96FJ2 89 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 TANGO6Q9C0B7 1094 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 EPN3Q9H201 632 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 PPANQ9NQ55 473 aaKnown RBP20.65■□□□□ 0.9
SSC4D-201ENST00000275560 NHSL1Q5SYE7 1610 aa20.65■□□□□ 0.9
SSC4D-201ENST00000275560 USP17L8P0C7I0 530 aa20.64■□□□□ 0.9
SSC4D-201ENST00000275560 HNRNPH3P31942 346 aaKnown RBP20.64■□□□□ 0.9
SSC4D-201ENST00000275560 CCDC152Q4G0S7 254 aa20.64■□□□□ 0.9
SSC4D-201ENST00000275560 KLHL7Q8IXQ5 586 aa20.64■□□□□ 0.9
SSC4D-201ENST00000275560 IFT20Q8IY31 132 aa20.64■□□□□ 0.9
SSC4D-201ENST00000275560 IL17RBQ9NRM6 502 aa20.64■□□□□ 0.9
SSC4D-201ENST00000275560 USP17L3A6NCW0 530 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 USP17L4A6NCW7 530 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 MAP2K2P36507 400 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 PTGISQ16647 500 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 CFAP221Q4G0U5 840 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 KDM7AQ6ZMT4 941 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 USP17L1Q7RTZ2 530 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 PNMA1Q8ND90 353 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 CCT8L2Q96SF2 557 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 GOLPH3Q9H4A6 298 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 GDF3Q9NR23 364 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 TCP11L1Q9NUJ3 509 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 MYH1P12882 1939 aa20.64■□□□□ 0.89
SSC4D-201ENST00000275560 E7EVH7 732 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 TFAP4Q01664 338 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 CACNA2D4Q7Z3S7 1137 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 CABS1Q96KC9 395 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 NOX5Q96PH1 765 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 CXorf56Q9H5V9 222 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 PPP1R37O75864 691 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 MECOMQ03112 1051 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 EHHADHQ08426 723 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms