RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 ARHGAP4P98171 946 aa18.69■□□□□ 0.58
CCDC40-201ENST00000269318 PAK1Q13153 545 aa18.69■□□□□ 0.58
CCDC40-201ENST00000269318 DHX8Q14562 1220 aaKnown RBP18.69■□□□□ 0.58
CCDC40-201ENST00000269318 SAMD7Q7Z3H4 446 aa18.69■□□□□ 0.58
CCDC40-201ENST00000269318 TEX2Q8IWB9 1127 aa18.69■□□□□ 0.58
CCDC40-201ENST00000269318 ADSSL1Q8N142 457 aa18.69■□□□□ 0.58
CCDC40-201ENST00000269318 ASTN2O75129 1339 aaPredicted RBP18.69■□□□□ 0.58
CCDC40-201ENST00000269318 A0A1B0GTH6 734 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 SREBF1P36956 1147 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 TMEM119Q4V9L6 283 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 GIMAP8Q8ND71 665 aaPredicted RBP18.68■□□□□ 0.58
CCDC40-201ENST00000269318 NLGN2Q8NFZ4 835 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 CHURC1Q8WUH1 139 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 GJA10Q969M2 543 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 CNOT7Q9UIV1 285 aaKnown RBP18.68■□□□□ 0.58
CCDC40-201ENST00000269318 ATAD5Q96QE3 1844 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 TRAF1Q13077 416 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 NR1I3Q14994 352 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 KRT79Q5XKE5 535 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 CCDC84Q86UT8 332 aaPredicted RBP18.68■□□□□ 0.58
CCDC40-201ENST00000269318 SNX29Q8TEQ0 813 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 NELFBQ8WX92 580 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 PCDHA12Q9UN75 941 aa18.68■□□□□ 0.58
CCDC40-201ENST00000269318 SPDYE3A6NKU9 549 aa18.67■□□□□ 0.58
CCDC40-201ENST00000269318 AMPD3Q01432 767 aa18.67■□□□□ 0.58
CCDC40-201ENST00000269318 ZYXQ15942 572 aaKnown RBP18.67■□□□□ 0.58
CCDC40-201ENST00000269318 FAM160B2Q86V87 743 aa18.67■□□□□ 0.58
CCDC40-201ENST00000269318 GJA3Q9Y6H8 435 aa18.67■□□□□ 0.58
CCDC40-201ENST00000269318 PSDA5PKW4 1024 aaPredicted RBP18.66■□□□□ 0.58
CCDC40-201ENST00000269318 SFPQP23246 707 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCDC40-201ENST00000269318 TBX2Q13207 712 aaPredicted RBP18.66■□□□□ 0.58
CCDC40-201ENST00000269318 Q4G0T1 1027 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 TBC1D10BQ4KMP7 808 aaPredicted RBP18.66■□□□□ 0.58
CCDC40-201ENST00000269318 HYIQ5T013 277 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 ETNPPLQ8TBG4 499 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 KIFC2Q96AC6 838 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 LENG9Q96B70 501 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 FEM1BQ9UK73 627 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 ZNF541Q9H0D2 1346 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 COBLO75128 1261 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 HOXA13P31271 388 aaPredicted RBP18.66■□□□□ 0.58
CCDC40-201ENST00000269318 CIITAP33076 1130 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 ECM1Q16610 540 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 PTPN21Q16825 1174 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 SV2BQ7L1I2 683 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 LARP4BQ92615 738 aaKnown RBP18.66■□□□□ 0.58
CCDC40-201ENST00000269318 RAD54LQ92698 747 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 CDK5RAP3Q96JB5 506 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 ZNF341Q9BYN7 854 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 HACL1Q9UJ83 578 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 MAPK8IP1Q9UQF2 711 aa18.66■□□□□ 0.58
CCDC40-201ENST00000269318 ASIC1P78348 528 aa18.65■□□□□ 0.58
CCDC40-201ENST00000269318 MCM6Q14566 821 aa18.65■□□□□ 0.58
CCDC40-201ENST00000269318 KCNK18Q7Z418 384 aa18.65■□□□□ 0.58
CCDC40-201ENST00000269318 GINM1Q9NU53 330 aa18.65■□□□□ 0.58
CCDC40-201ENST00000269318 FBXO28Q9NVF7 368 aa18.65■□□□□ 0.58
CCDC40-201ENST00000269318 ADD3Q9UEY8 706 aaKnown RBP18.65■□□□□ 0.58
CCDC40-201ENST00000269318 SMCHD1A6NHR9 2005 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 MYMKA6NI61 221 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 FAM86B1E9PN63 330 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 TBX3O15119 743 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 MARCH6O60337 910 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 CYP3A4P08684 503 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 FAM86B2P0C5J1 330 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 KIF4BQ2VIQ3 1234 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 CNNM4Q6P4Q7 775 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 CCDC174Q6PII3 467 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 SLFN12Q8IYM2 578 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 DEFB129Q9H1M3 183 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 KCND1Q9NSA2 647 aa18.64■□□□□ 0.58
CCDC40-201ENST00000269318 LRRC10BA6NIK2 292 aa18.64■□□□□ 0.57
CCDC40-201ENST00000269318 SLC26A4O43511 780 aa18.64■□□□□ 0.57
CCDC40-201ENST00000269318 CTNND1O60716 968 aaKnown RBP18.64■□□□□ 0.57
CCDC40-201ENST00000269318 SPECC1LQ69YQ0 1117 aa18.64■□□□□ 0.57
CCDC40-201ENST00000269318 CTAGE1Q96RT6 745 aa18.64■□□□□ 0.57
CCDC40-201ENST00000269318 EXOC1Q9NV70 894 aa18.64■□□□□ 0.57
CCDC40-201ENST00000269318 LIMA1Q9UHB6 759 aaKnown RBP18.64■□□□□ 0.57
CCDC40-201ENST00000269318 R3HCC1Q9Y3T6 440 aaKnown RBP18.64■□□□□ 0.57
CCDC40-201ENST00000269318 TERF1P54274 439 aa18.63■□□□□ 0.57
CCDC40-201ENST00000269318 PMS1P54277 932 aaKnown RBP18.63■□□□□ 0.57
CCDC40-201ENST00000269318 PDE4DQ08499 809 aa18.63■□□□□ 0.57
CCDC40-201ENST00000269318 SPIRE1Q08AE8 756 aa18.63■□□□□ 0.57
CCDC40-201ENST00000269318 STK4Q13043 487 aa18.63■□□□□ 0.57
CCDC40-201ENST00000269318 TPD52L1Q16890 204 aaPredicted RBP18.63■□□□□ 0.57
CCDC40-201ENST00000269318 COBLL1Q53SF7 1204 aa18.63■□□□□ 0.57
CCDC40-201ENST00000269318 PRR16Q569H4 304 aa18.63■□□□□ 0.57
CCDC40-201ENST00000269318 UPF1Q92900 1129 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCDC40-201ENST00000269318 CCDC47Q96A33 483 aaKnown RBP18.63■□□□□ 0.57
CCDC40-201ENST00000269318 FEZ1Q99689 392 aa18.63■□□□□ 0.57
CCDC40-201ENST00000269318 GTPBP4Q9BZE4 634 aaKnown RBP18.63■□□□□ 0.57
CCDC40-201ENST00000269318 KIAA1683Q9H0B3 1180 aa18.63■□□□□ 0.57
CCDC40-201ENST00000269318 TMX1Q9H3N1 280 aa18.63■□□□□ 0.57
CCDC40-201ENST00000269318 TRIM49BA6NDI0 452 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 H7C1D1 291 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 TEX33O43247 280 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 INPP5BP32019 993 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 PBX1P40424 430 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 DNTTIP2Q5QJE6 756 aaKnown RBP18.62■□□□□ 0.57
CCDC40-201ENST00000269318 TBC1D5Q92609 795 aa18.62■□□□□ 0.57
CCDC40-201ENST00000269318 DHTKD1Q96HY7 919 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms