RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RUFY3Q7L099 469 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 CIZ1Q9ULV3 898 aaPredicted RBP15.51■□□□□ 0.07
SGCA-201ENST00000262018 CYP46A1Q9Y6A2 500 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 CACNA1AO00555 2505 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 LAMA4Q16363 1823 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 GRXCR2A6NFK2 248 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 FOXP2O15409 715 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 HSP90AA1P07900 732 aaKnown RBP15.51■□□□□ 0.07
SGCA-201ENST00000262018 CYP21A2P08686 494 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 SMPD1P17405 629 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 GNAT2P19087 354 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 KCNJ6P48051 423 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 CUL4AQ13619 759 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 PRPF38AQ8NAV1 312 aaKnown RBP15.51■□□□□ 0.07
SGCA-201ENST00000262018 TMX3Q96JJ7 454 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 MFSD14AQ96MC6 490 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 STRBPQ96SI9 672 aaKnown RBP15.51■□□□□ 0.07
SGCA-201ENST00000262018 ZBED2Q9BTP6 218 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 SUGCTQ9HAC7 445 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 FBXO40Q9UH90 709 aa15.51■□□□□ 0.07
SGCA-201ENST00000262018 MYH8P13535 1937 aa15.5■□□□□ 0.07
SGCA-201ENST00000262018 ZNF318Q5VUA4 2279 aa15.5■□□□□ 0.07
SGCA-201ENST00000262018 ATP2A1O14983 1001 aa15.5■□□□□ 0.07
SGCA-201ENST00000262018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.5■□□□□ 0.07
SGCA-201ENST00000262018 TMCO2Q7Z6W1 182 aaPredicted RBP15.5■□□□□ 0.07
SGCA-201ENST00000262018 RETREG2Q8NC44 543 aa15.5■□□□□ 0.07
SGCA-201ENST00000262018 CHST13Q8NET6 341 aa15.5■□□□□ 0.07
SGCA-201ENST00000262018 ATP8A2Q9NTI2 1148 aa15.5■□□□□ 0.07
SGCA-201ENST00000262018 PDRG1Q9NUG6 133 aa15.5■□□□□ 0.07
SGCA-201ENST00000262018 CTNNA3Q9UI47 895 aa15.5■□□□□ 0.07
SGCA-201ENST00000262018 TAF6LQ9Y6J9 622 aa15.5■□□□□ 0.07
SGCA-201ENST00000262018 SLC4A4Q9Y6R1 1079 aa15.5■□□□□ 0.07
SGCA-201ENST00000262018 CYP2D7A0A087X1C5 515 aa15.49■□□□□ 0.07
SGCA-201ENST00000262018 IQCF3P0C7M6 154 aa15.49■□□□□ 0.07
SGCA-201ENST00000262018 AK2P54819 239 aa15.49■□□□□ 0.07
SGCA-201ENST00000262018 PUS10Q3MIT2 529 aaKnown RBP15.49■□□□□ 0.07
SGCA-201ENST00000262018 BLOC1S2Q6QNY1 142 aa15.49■□□□□ 0.07
SGCA-201ENST00000262018 KIFC2Q96AC6 838 aa15.49■□□□□ 0.07
SGCA-201ENST00000262018 PDGFCQ9NRA1 345 aa15.49■□□□□ 0.07
SGCA-201ENST00000262018 HOMER2Q9NSB8 354 aa15.49■□□□□ 0.07
SGCA-201ENST00000262018 ASB14A6NK59 587 aa15.48■□□□□ 0.07
SGCA-201ENST00000262018 H3BQ06 376 aaPredicted RBP15.48■□□□□ 0.07
SGCA-201ENST00000262018 BAIAP3O94812 1187 aa15.48■□□□□ 0.07
SGCA-201ENST00000262018 CPA1P15085 419 aa15.48■□□□□ 0.07
SGCA-201ENST00000262018 RPS6KB1P23443 525 aa15.48■□□□□ 0.07
SGCA-201ENST00000262018 FAM47CQ5HY64 1035 aa15.48■□□□□ 0.07
SGCA-201ENST00000262018 TMEM63BQ5T3F8 832 aa15.48■□□□□ 0.07
SGCA-201ENST00000262018 EEPD1Q7L9B9 569 aa15.48■□□□□ 0.07
SGCA-201ENST00000262018 FAM133AQ8N9E0 248 aa15.48■□□□□ 0.07
SGCA-201ENST00000262018 NEK1Q96PY6 1258 aa15.48■□□□□ 0.07
SGCA-201ENST00000262018 LIMCH1Q9UPQ0 1083 aa15.48■□□□□ 0.07
SGCA-201ENST00000262018 DDX49Q9Y6V7 483 aaKnown RBP15.48■□□□□ 0.07
SGCA-201ENST00000262018 SOWAHBA6NEL2 793 aa15.47■□□□□ 0.07
SGCA-201ENST00000262018 PRKAB2O43741 272 aa15.47■□□□□ 0.07
SGCA-201ENST00000262018 ERVK-21P61565 698 aa15.47■□□□□ 0.07
SGCA-201ENST00000262018 ALX1Q15699 326 aa15.47■□□□□ 0.07
SGCA-201ENST00000262018 IQSEC1Q6DN90 963 aa15.47■□□□□ 0.07
SGCA-201ENST00000262018 GIMAP6Q6P9H5 292 aa15.47■□□□□ 0.07
SGCA-201ENST00000262018 C16orf86Q6ZW13 317 aa15.47■□□□□ 0.07
SGCA-201ENST00000262018 PRSS33Q8NF86 280 aa15.47■□□□□ 0.07
SGCA-201ENST00000262018 INTS4Q96HW7 963 aaKnown RBP15.47■□□□□ 0.07
SGCA-201ENST00000262018 TGS1Q96RS0 853 aaKnown RBP15.47■□□□□ 0.07
SGCA-201ENST00000262018 SLC38A10Q9HBR0 1119 aa15.47■□□□□ 0.07
SGCA-201ENST00000262018 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
SGCA-201ENST00000262018 Q9Y3F1 56 aa15.47■□□□□ 0.07
SGCA-201ENST00000262018 WDFY4Q6ZS81 3184 aa15.47■□□□□ 0.07
SGCA-201ENST00000262018 ZMYM6O95789 1325 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 ZDBF2Q9HCK1 2354 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 F5H6K3 240 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 NDUFB10O96000 172 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 FGAP02671 866 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 MYL3P08590 195 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 WDR5P61964 334 aaKnown RBP15.46■□□□□ 0.07
SGCA-201ENST00000262018 FOXK2Q01167 660 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 ZP2Q05996 745 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 KLRC3Q07444 240 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 C12orf60Q5U649 245 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 STOX1Q6ZVD7 989 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 FBXO16Q8IX29 292 aaPredicted RBP15.46■□□□□ 0.07
SGCA-201ENST00000262018 AMOTL1Q8IY63 956 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 PPP1R13LQ8WUF5 828 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 ZSCAN31Q96LW9 406 aaPredicted RBP15.46■□□□□ 0.07
SGCA-201ENST00000262018 NACAP1Q9BZK3 213 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 POLR3EQ9NVU0 708 aa15.46■□□□□ 0.07
SGCA-201ENST00000262018 GSG1L2A8MUP6 293 aa15.45■□□□□ 0.06
SGCA-201ENST00000262018 PATL2C9JE40 543 aaKnown RBP15.45■□□□□ 0.06
SGCA-201ENST00000262018 USP17L12C9JPN9 530 aa15.45■□□□□ 0.06
SGCA-201ENST00000262018 USP17L21D6R901 530 aa15.45■□□□□ 0.06
SGCA-201ENST00000262018 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
SGCA-201ENST00000262018 APPP05067 770 aa15.45■□□□□ 0.06
SGCA-201ENST00000262018 HMGB1P09429 215 aaKnown RBP15.45■□□□□ 0.06
SGCA-201ENST00000262018 PTPN5P54829 565 aa15.45■□□□□ 0.06
SGCA-201ENST00000262018 ANKRD1Q15327 319 aa15.45■□□□□ 0.06
SGCA-201ENST00000262018 IMMTQ16891 758 aaKnown RBP15.45■□□□□ 0.06
SGCA-201ENST00000262018 TAPT1Q6NXT6 567 aa15.45■□□□□ 0.06
SGCA-201ENST00000262018 EP400NLQ6ZTU2 488 aa15.45■□□□□ 0.06
SGCA-201ENST00000262018 NEK9Q8TD19 979 aa15.45■□□□□ 0.06
SGCA-201ENST00000262018 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.45■□□□□ 0.06
SGCA-201ENST00000262018 ACAD9Q9H845 621 aa15.45■□□□□ 0.06
SGCA-201ENST00000262018 FAM50BQ9Y247 325 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms