RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CACNA2D4Q7Z3S7 1137 aa17.63■□□□□ 0.41
LMNB1-201ENST00000261366 DNAAF5Q86Y56 855 aa17.63■□□□□ 0.41
LMNB1-201ENST00000261366 PAPPAQ13219 1627 aa17.63■□□□□ 0.41
LMNB1-201ENST00000261366 DDAH1O94760 285 aa17.63■□□□□ 0.41
LMNB1-201ENST00000261366 ARL6IP4Q66PJ3 421 aaKnown RBP17.63■□□□□ 0.41
LMNB1-201ENST00000261366 OR2W6PQ8NHA6 318 aa17.63■□□□□ 0.41
LMNB1-201ENST00000261366 TLR10Q9BXR5 811 aa17.63■□□□□ 0.41
LMNB1-201ENST00000261366 BCCIPQ9P287 314 aaKnown RBP eCLIP17.63■□□□□ 0.41
LMNB1-201ENST00000261366 LSP1P33241 339 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 HDLBPQ00341 1268 aaKnown RBP17.62■□□□□ 0.41
LMNB1-201ENST00000261366 CCDC91Q7Z6B0 441 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 TRIM9Q9C026 710 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 KBTBD4Q9NVX7 518 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 DISP2A7MBM2 1401 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 E7EVH7 732 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 CCNT1O60563 726 aaKnown RBP17.62■□□□□ 0.41
LMNB1-201ENST00000261366 MAP2K2P36507 400 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 HLTFQ14527 1009 aaKnown RBP eCLIP17.62■□□□□ 0.41
LMNB1-201ENST00000261366 DDB1Q16531 1140 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 POTEDQ86YR6 584 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 ZNF384Q8TF68 577 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 SEMA6BQ9H3T3 888 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 GOLPH3Q9H4A6 298 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 TCP1P17987 556 aaKnown RBP17.62■□□□□ 0.41
LMNB1-201ENST00000261366 KCNB1Q14721 858 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 NAA35Q5VZE5 725 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 EMBQ6PCB8 327 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 DHTKD1Q96HY7 919 aaPredicted RBP17.62■□□□□ 0.41
LMNB1-201ENST00000261366 MTA3Q9BTC8 594 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 NDST4Q9H3R1 872 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 TCP11L1Q9NUJ3 509 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 ANAPC4Q9UJX5 808 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 PCDHA4Q9UN74 947 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 PLAGL2Q9UPG8 496 aa17.62■□□□□ 0.41
LMNB1-201ENST00000261366 BICDL2A1A5D9 508 aa17.61■□□□□ 0.41
LMNB1-201ENST00000261366 KIAA0895Q8NCT3 520 aa17.61■□□□□ 0.41
LMNB1-201ENST00000261366 GLIS3Q8NEA6 775 aa17.61■□□□□ 0.41
LMNB1-201ENST00000261366 CCDC47Q96A33 483 aaKnown RBP17.61■□□□□ 0.41
LMNB1-201ENST00000261366 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.61■□□□□ 0.41
LMNB1-201ENST00000261366 NR1D1P20393 614 aa17.61■□□□□ 0.41
LMNB1-201ENST00000261366 EHHADHQ08426 723 aa17.61■□□□□ 0.41
LMNB1-201ENST00000261366 CEP85LQ5SZL2 805 aa17.61■□□□□ 0.41
LMNB1-201ENST00000261366 RETREG2Q8NC44 543 aa17.61■□□□□ 0.41
LMNB1-201ENST00000261366 DYNLL2Q96FJ2 89 aa17.61■□□□□ 0.41
LMNB1-201ENST00000261366 VAT1LQ9HCJ6 419 aa17.61■□□□□ 0.41
LMNB1-201ENST00000261366 PCDHA6Q9UN73 950 aa17.61■□□□□ 0.41
LMNB1-201ENST00000261366 PCDHA8Q9Y5H6 950 aa17.61■□□□□ 0.41
LMNB1-201ENST00000261366 CALML3P27482 149 aa17.6■□□□□ 0.41
LMNB1-201ENST00000261366 KLHDC7AQ5VTJ3 777 aa17.6■□□□□ 0.41
LMNB1-201ENST00000261366 FAM114A1Q8IWE2 563 aa17.6■□□□□ 0.41
LMNB1-201ENST00000261366 MEFVO15553 781 aaPredicted RBP17.6■□□□□ 0.41
LMNB1-201ENST00000261366 PALMO75781 387 aa17.6■□□□□ 0.41
LMNB1-201ENST00000261366 ATP6V1AP38606 617 aa17.6■□□□□ 0.41
LMNB1-201ENST00000261366 TFAP4Q01664 338 aa17.6■□□□□ 0.41
LMNB1-201ENST00000261366 VWA3BQ502W6 1294 aa17.6■□□□□ 0.41
LMNB1-201ENST00000261366 ALS2CLQ60I27 953 aa17.6■□□□□ 0.41
LMNB1-201ENST00000261366 B4GALNT4Q76KP1 1039 aa17.6■□□□□ 0.41
LMNB1-201ENST00000261366 STX8Q9UNK0 236 aa17.6■□□□□ 0.41
LMNB1-201ENST00000261366 USP17L3A6NCW0 530 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 USP17L4A6NCW7 530 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 USP17L8P0C7I0 530 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 KLRK1P26718 216 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 SETQ01105 290 aaPredicted RBP17.59■□□□□ 0.41
LMNB1-201ENST00000261366 ACTN3Q08043 901 aaPredicted RBP17.59■□□□□ 0.41
LMNB1-201ENST00000261366 CFAP221Q4G0U5 840 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 USP17L1Q7RTZ2 530 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 IFT20Q8IY31 132 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 ZNF473Q8WTR7 871 aaKnown RBP17.59■□□□□ 0.41
LMNB1-201ENST00000261366 NOX5Q96PH1 765 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 CEP89Q96ST8 783 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 MCM9Q9NXL9 1143 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 TXKP42681 527 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 ZNF662Q6ZS27 426 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 DDX42Q86XP3 938 aaKnown RBP eCLIP17.59■□□□□ 0.41
LMNB1-201ENST00000261366 PNMA1Q8ND90 353 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 CASKIN2Q8WXE0 1202 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 TIAM2Q8IVF5 1701 aa17.59■□□□□ 0.41
LMNB1-201ENST00000261366 IL6STP40189 918 aaPredicted RBP17.58■□□□□ 0.41
LMNB1-201ENST00000261366 CCDC152Q4G0S7 254 aa17.58■□□□□ 0.41
LMNB1-201ENST00000261366 NOC3LQ8WTT2 800 aaKnown RBP17.58■□□□□ 0.41
LMNB1-201ENST00000261366 CABS1Q96KC9 395 aa17.58■□□□□ 0.41
LMNB1-201ENST00000261366 ERGIC2Q96RQ1 377 aa17.58■□□□□ 0.41
LMNB1-201ENST00000261366 CCT8L2Q96SF2 557 aa17.58■□□□□ 0.41
LMNB1-201ENST00000261366 CXorf56Q9H5V9 222 aa17.58■□□□□ 0.41
LMNB1-201ENST00000261366 TFCP2L1Q9NZI6 479 aa17.58■□□□□ 0.41
LMNB1-201ENST00000261366 KIF5BP33176 963 aa17.58■□□□□ 0.4
LMNB1-201ENST00000261366 SF3B2Q13435 895 aaKnown RBP17.58■□□□□ 0.4
LMNB1-201ENST00000261366 RCSD1Q6JBY9 416 aa17.58■□□□□ 0.4
LMNB1-201ENST00000261366 DCP1AQ9NPI6 582 aaPredicted RBP17.58■□□□□ 0.4
LMNB1-201ENST00000261366 TBC1D7Q9P0N9 293 aa17.58■□□□□ 0.4
LMNB1-201ENST00000261366 PLAAQ9Y263 795 aa17.58■□□□□ 0.4
LMNB1-201ENST00000261366 CNPY4Q8N129 248 aa17.58■□□□□ 0.4
LMNB1-201ENST00000261366 MARCH10Q8NA82 808 aaPredicted RBP17.58■□□□□ 0.4
LMNB1-201ENST00000261366 PACSIN1Q9BY11 444 aa17.58■□□□□ 0.4
LMNB1-201ENST00000261366 NIP7Q9Y221 180 aaKnown RBP eCLIP17.58■□□□□ 0.4
LMNB1-201ENST00000261366 SIK3Q9Y2K2 1263 aa17.58■□□□□ 0.4
LMNB1-201ENST00000261366 PPP1R37O75864 691 aa17.57■□□□□ 0.4
LMNB1-201ENST00000261366 PRDX5P30044 214 aa17.57■□□□□ 0.4
LMNB1-201ENST00000261366 USP8P40818 1118 aa17.57■□□□□ 0.4
LMNB1-201ENST00000261366 SKOR1P84550 965 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms