RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 NUP58Q9BVL2 599 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 NAA15Q9BXJ9 866 aaKnown RBP13.1□□□□□ -0.31
CCNA1-201ENST00000255465 TAF1DQ9H5J8 278 aaPredicted RBP13.1□□□□□ -0.31
CCNA1-201ENST00000255465 ATP8A1Q9Y2Q0 1164 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 CFAP73A6NFT4 308 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 PRC1O43663 620 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 CCDC175P0C221 793 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 IDO1P14902 403 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 ZFXP17010 805 aaPredicted RBP13.1□□□□□ -0.31
CCNA1-201ENST00000255465 KCNA4P22459 653 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 RPS12P25398 132 aaKnown RBP13.1□□□□□ -0.31
CCNA1-201ENST00000255465 EPHX2P34913 555 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 BCAMP50895 628 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 TIMM10P62072 90 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 GTF2IP78347 998 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 POSTNQ15063 836 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 DACT2Q5SW24 774 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
CCNA1-201ENST00000255465 VPS37DQ86XT2 251 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 C16orf71Q8IYS4 520 aaPredicted RBP13.1□□□□□ -0.31
CCNA1-201ENST00000255465 DPF2Q92785 391 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 FBXW7Q969H0 707 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 PGBD1Q96JS3 809 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 ATXN10Q9UBB4 475 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 TMEM98Q9Y2Y6 226 aa13.1□□□□□ -0.31
CCNA1-201ENST00000255465 AGPSO00116 658 aa13.09□□□□□ -0.31
CCNA1-201ENST00000255465 ATP6V1G1O75348 118 aa13.09□□□□□ -0.31
CCNA1-201ENST00000255465 TOMM70O94826 608 aa13.09□□□□□ -0.31
CCNA1-201ENST00000255465 KIF5BP33176 963 aa13.09□□□□□ -0.31
CCNA1-201ENST00000255465 CCDC15Q0P6D6 951 aa13.09□□□□□ -0.31
CCNA1-201ENST00000255465 SEPT2Q15019 361 aa13.09□□□□□ -0.31
CCNA1-201ENST00000255465 EHBP1Q8NDI1 1231 aa13.09□□□□□ -0.31
CCNA1-201ENST00000255465 TRAPPC9Q96Q05 1148 aa13.09□□□□□ -0.31
CCNA1-201ENST00000255465 RUFY1Q96T51 708 aa13.09□□□□□ -0.31
CCNA1-201ENST00000255465 LUC7LQ9NQ29 371 aaKnown RBP13.09□□□□□ -0.31
CCNA1-201ENST00000255465 SLC5A4Q9NY91 659 aa13.09□□□□□ -0.31
CCNA1-201ENST00000255465 CNOT7Q9UIV1 285 aaKnown RBP13.09□□□□□ -0.31
CCNA1-201ENST00000255465 ZNF609O15014 1411 aa13.09□□□□□ -0.31
CCNA1-201ENST00000255465 ADAMTSL1Q8N6G6 1762 aa13.09□□□□□ -0.31
CCNA1-201ENST00000255465 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.32
CCNA1-201ENST00000255465 NLRP5P59047 1200 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 FANCCQ00597 558 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 FAM160A1Q05DH4 1040 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 MYO1EQ12965 1108 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 USP4Q13107 963 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 MPP3Q13368 585 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 PRPF4BQ13523 1007 aaKnown RBP13.08□□□□□ -0.32
CCNA1-201ENST00000255465 PABPC1LQ4VXU2 614 aaKnown RBP13.08□□□□□ -0.32
CCNA1-201ENST00000255465 ANKRD20A8PQ5CZ79 823 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 AGBL3Q8NEM8 1001 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 GMLQ99445 158 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 MXD3Q9BW11 206 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 CTNNAL1Q9UBT7 734 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 G3BP2Q9UN86 482 aaKnown RBP13.08□□□□□ -0.32
CCNA1-201ENST00000255465 TMEM221A6NGB7 291 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 TMEM232C9JQI7 657 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 ANP32DO95626 131 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 CCDC166P0CW27 439 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 TOP1P11387 765 aaKnown RBP13.08□□□□□ -0.32
CCNA1-201ENST00000255465 ALADP13716 330 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 NAT1P18440 290 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 ADORA1P30542 326 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 TBX2Q13207 712 aaPredicted RBP13.08□□□□□ -0.32
CCNA1-201ENST00000255465 MFSD4BQ5TF39 518 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 PPP4R3AQ6IN85 833 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 CCDC83Q8IWF9 413 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 MICALL2Q8IY33 904 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 MYOCDQ8IZQ8 938 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 IWS1Q96ST2 819 aa13.08□□□□□ -0.32
CCNA1-201ENST00000255465 BARX2Q9UMQ3 279 aaPredicted RBP13.08□□□□□ -0.32
CCNA1-201ENST00000255465 IQSEC3Q9UPP2 1182 aaPredicted RBP13.08□□□□□ -0.32
CCNA1-201ENST00000255465 SALL3Q9BXA9 1300 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 H7C1D1 291 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 IPO5O00410 1097 aaKnown RBP13.07□□□□□ -0.32
CCNA1-201ENST00000255465 RHOXF2BP0C7M4 288 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 EIF4BP23588 611 aaKnown RBP13.07□□□□□ -0.32
CCNA1-201ENST00000255465 CCND1P24385 295 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 LSP1P33241 339 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 GNAQP50148 359 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 ELF3P78545 371 aaPredicted RBP13.07□□□□□ -0.32
CCNA1-201ENST00000255465 PTGISQ16647 500 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 EAPPQ56P03 285 aaPredicted RBP13.07□□□□□ -0.32
CCNA1-201ENST00000255465 SPECC1Q5M775 1068 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 PNMA8AQ86V59 439 aaPredicted RBP13.07□□□□□ -0.32
CCNA1-201ENST00000255465 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 TEKT4Q8WW24 435 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 NEUROD6Q96NK8 337 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 NAPGQ99747 312 aaPredicted RBP13.07□□□□□ -0.32
CCNA1-201ENST00000255465 RHOXF2Q9BQY4 288 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 ALDH8A1Q9H2A2 487 aaPredicted RBP13.07□□□□□ -0.32
CCNA1-201ENST00000255465 GPR108Q9NPR9 543 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 ADARB2Q9NS39 739 aaKnown RBP13.07□□□□□ -0.32
CCNA1-201ENST00000255465 STAP2Q9UGK3 403 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 PUF60Q9UHX1 559 aaKnown RBP13.07□□□□□ -0.32
CCNA1-201ENST00000255465 JAG2Q9Y219 1238 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 SNX14Q9Y5W7 946 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 FAM205AQ6ZU69 1335 aa13.07□□□□□ -0.32
CCNA1-201ENST00000255465 MYO3BQ8WXR4 1341 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms