RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 ATP1A3P13637 1013 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 STRN3Q13033 797 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 E2F5Q15329 346 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 CCDC122Q5T0U0 273 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 CPLX4Q7Z7G2 160 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 TAX1BP1Q86VP1 789 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 DYNLL2Q96FJ2 89 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 BLZF1Q9H2G9 400 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 KANSL2Q9H9L4 492 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 BAIAP2L1Q9UHR4 511 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 SAR1BQ9Y6B6 198 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 USP14P54578 494 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 VIPAS39Q9H9C1 493 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 MYO1AQ9UBC5 1043 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 CETN3O15182 167 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 LONP1P36776 959 aaKnown RBP12.08□□□□□ -0.48
COPA-201ENST00000241704 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
COPA-201ENST00000241704 BEND6Q5SZJ8 279 aaPredicted RBP12.08□□□□□ -0.48
COPA-201ENST00000241704 DYMQ7RTS9 669 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 MCF2L2Q86YR7 1114 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 MB21D2Q8IYB1 491 aaPredicted RBP12.08□□□□□ -0.48
COPA-201ENST00000241704 CCDC51Q96ER9 411 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 SH3GL3Q99963 347 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 E7EVH7 732 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 ITPK1Q13572 414 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 TOGARAM2Q6ZUX3 1019 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 CCPG1Q9ULG6 757 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 PCDHA4Q9UN74 947 aa12.08□□□□□ -0.48
COPA-201ENST00000241704 GAS7O60861 476 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 OSBPP22059 807 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 VSNL1P62760 191 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 HLTFQ14527 1009 aaKnown RBP eCLIP12.07□□□□□ -0.48
COPA-201ENST00000241704 C2orf69Q8N8R5 385 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 ZNF512BQ96KM6 892 aaPredicted RBP12.07□□□□□ -0.48
COPA-201ENST00000241704 GOLPH3LQ9H4A5 285 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 ACTR5Q9H9F9 607 aaPredicted RBP12.07□□□□□ -0.48
COPA-201ENST00000241704 PCDHA12Q9UN75 941 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 PCDHA1Q9Y5I3 950 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 GCOM1H8Y6P7 765 aaPredicted RBP12.07□□□□□ -0.48
COPA-201ENST00000241704 GDF11O95390 407 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 POLR2MP0CAP2 368 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 ATP1A2P50993 1020 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 ARID5AQ03989 594 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 IFT88Q13099 833 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 TBC1D10BQ4KMP7 808 aaPredicted RBP12.07□□□□□ -0.48
COPA-201ENST00000241704 GRIPAP1Q4V328 841 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 MIGA2Q7L4E1 593 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 PODNQ7Z5L7 613 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 FTOQ9C0B1 505 aaKnown RBP eCLIP12.07□□□□□ -0.48
COPA-201ENST00000241704 PI4KBQ9UBF8 816 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 TECP42680 631 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 CDK8P49336 464 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 RSRC2Q7L4I2 434 aaKnown RBP12.07□□□□□ -0.48
COPA-201ENST00000241704 NELFBQ8WX92 580 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 FRMD4BQ9Y2L6 1034 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 KDM3AQ9Y4C1 1321 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 GSG1L2A8MUP6 293 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 EPB41P11171 864 aaKnown RBP12.07□□□□□ -0.48
COPA-201ENST00000241704 SCP2P22307 547 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 KLC4Q9NSK0 619 aa12.07□□□□□ -0.48
COPA-201ENST00000241704 hCG_1984214I3L0E3 225 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 LAD1O00515 517 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 FOSP01100 380 aaPredicted RBP12.06□□□□□ -0.48
COPA-201ENST00000241704 TRMT44Q8IYL2 757 aaKnown RBP12.06□□□□□ -0.48
COPA-201ENST00000241704 ZNF713Q8N859 430 aaPredicted RBP12.06□□□□□ -0.48
COPA-201ENST00000241704 LINC00116Q8NCU8 138 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 AMNQ9BXJ7 453 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
COPA-201ENST00000241704 ADGRB2O60241 1585 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 NR5A1Q13285 461 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 SPOUT1Q5T280 376 aaKnown RBP12.06□□□□□ -0.48
COPA-201ENST00000241704 SYMPKQ92797 1274 aaKnown RBP12.06□□□□□ -0.48
COPA-201ENST00000241704 NBPF3Q9H094 633 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 DCP1AQ9NPI6 582 aaPredicted RBP12.06□□□□□ -0.48
COPA-201ENST00000241704 PNPLA7Q6ZV29 1317 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 MYOM1P52179 1685 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 GTPBP6O43824 516 aaPredicted RBP12.06□□□□□ -0.48
COPA-201ENST00000241704 NTSR2O95665 410 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 PTPN21Q16825 1174 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 DCAF17Q5H9S7 520 aaPredicted RBP12.06□□□□□ -0.48
COPA-201ENST00000241704 SH3RF3Q8TEJ3 882 aaPredicted RBP12.06□□□□□ -0.48
COPA-201ENST00000241704 SAAL1Q96ER3 474 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 AIFM3Q96NN9 605 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 ZNF277Q9NRM2 450 aaPredicted RBP12.06□□□□□ -0.48
COPA-201ENST00000241704 TRPC6Q9Y210 931 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 NEDD4P46934 1319 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 GGCXP38435 758 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 RCAN1P53805 252 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 CYB5R4Q7L1T6 521 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 CDAN1Q8IWY9 1227 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 MSANTD4Q8NCY6 345 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 KAZALD1Q96I82 304 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 NUP58Q9BVL2 599 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 PLVAPQ9BX97 442 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 L1RE1Q9UN81 338 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 EXOC7Q9UPT5 735 aa12.06□□□□□ -0.48
COPA-201ENST00000241704 MAP2K7O14733 419 aa12.05□□□□□ -0.48
COPA-201ENST00000241704 CALUO43852 315 aaPredicted RBP12.05□□□□□ -0.48
COPA-201ENST00000241704 CPP00450 1065 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms