RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 PDGFCQ9NRA1 345 aa18.46■□□□□ 0.55
EBI3-201ENST00000221847 MEIS2O14770 477 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 CPLX1O14810 134 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 ADCY6O43306 1168 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 PFKFB2O60825 505 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 RARBP10826 455 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 NAPAP54920 295 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 AKAP17AQ02040 695 aaKnown RBP18.45■□□□□ 0.54
EBI3-201ENST00000221847 SCRN1Q12765 414 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 PKN1Q16512 942 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 PFKFB3Q16875 520 aaPredicted RBP18.45■□□□□ 0.54
EBI3-201ENST00000221847 UBE2Q1Q7Z7E8 422 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 SMARCC2Q8TAQ2 1214 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 DIS3LQ8TF46 1054 aaKnown RBP18.45■□□□□ 0.54
EBI3-201ENST00000221847 CUL5Q93034 780 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 BACH2Q9BYV9 841 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 VTA1Q9NP79 307 aa18.45■□□□□ 0.54
EBI3-201ENST00000221847 LRRC37A2A6NM11 1700 aa18.44■□□□□ 0.54
EBI3-201ENST00000221847 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.44■□□□□ 0.54
EBI3-201ENST00000221847 PIK3CDO00329 1044 aa18.44■□□□□ 0.54
EBI3-201ENST00000221847 LARGE1O95461 756 aa18.44■□□□□ 0.54
EBI3-201ENST00000221847 SCG2P13521 617 aa18.44■□□□□ 0.54
EBI3-201ENST00000221847 ADCYAP1R1P41586 468 aa18.44■□□□□ 0.54
EBI3-201ENST00000221847 MLLT1Q03111 559 aaPredicted RBP18.44■□□□□ 0.54
EBI3-201ENST00000221847 ME3Q16798 604 aa18.44■□□□□ 0.54
EBI3-201ENST00000221847 NECAB1Q8N987 351 aa18.44■□□□□ 0.54
EBI3-201ENST00000221847 ANKLE1Q8NAG6 615 aa18.44■□□□□ 0.54
EBI3-201ENST00000221847 PAWRQ96IZ0 340 aaKnown RBP18.44■□□□□ 0.54
EBI3-201ENST00000221847 IWS1Q96ST2 819 aa18.44■□□□□ 0.54
EBI3-201ENST00000221847 RNF26Q9BY78 433 aaPredicted RBP18.44■□□□□ 0.54
EBI3-201ENST00000221847 BARHL2Q9NY43 387 aa18.44■□□□□ 0.54
EBI3-201ENST00000221847 RBM27Q9P2N5 1060 aaKnown RBP18.44■□□□□ 0.54
EBI3-201ENST00000221847 FRMPD3Q5JV73 1810 aa18.44■□□□□ 0.54
EBI3-201ENST00000221847 PGK1P00558 417 aa18.43■□□□□ 0.54
EBI3-201ENST00000221847 MYCNP04198 464 aaPredicted RBP18.43■□□□□ 0.54
EBI3-201ENST00000221847 NR3C2P08235 984 aa18.43■□□□□ 0.54
EBI3-201ENST00000221847 TNFAIP2Q03169 654 aa18.43■□□□□ 0.54
EBI3-201ENST00000221847 SSRP1Q08945 709 aaKnown RBP18.43■□□□□ 0.54
EBI3-201ENST00000221847 UBE2SQ16763 222 aa18.43■□□□□ 0.54
EBI3-201ENST00000221847 TMEM63BQ5T3F8 832 aa18.43■□□□□ 0.54
EBI3-201ENST00000221847 IQSEC1Q6DN90 963 aa18.43■□□□□ 0.54
EBI3-201ENST00000221847 PPP1R18Q6NYC8 613 aa18.43■□□□□ 0.54
EBI3-201ENST00000221847 CPLX2Q6PUV4 134 aaKnown RBP18.43■□□□□ 0.54
EBI3-201ENST00000221847 ARRDC4Q8NCT1 418 aa18.43■□□□□ 0.54
EBI3-201ENST00000221847 IL31RAQ8NI17 732 aa18.43■□□□□ 0.54
EBI3-201ENST00000221847 PDCD2LQ9BRP1 358 aa18.43■□□□□ 0.54
EBI3-201ENST00000221847 XPNPEP3Q9NQH7 507 aa18.43■□□□□ 0.54
EBI3-201ENST00000221847 SMCO2A6NFE2 343 aa18.42■□□□□ 0.54
EBI3-201ENST00000221847 hCG_1984214I3L0E3 225 aa18.42■□□□□ 0.54
EBI3-201ENST00000221847 DTNBO60941 627 aa18.42■□□□□ 0.54
EBI3-201ENST00000221847 DUSP11O75319 330 aaKnown RBP18.42■□□□□ 0.54
EBI3-201ENST00000221847 MYCLP12524 364 aaPredicted RBP18.42■□□□□ 0.54
EBI3-201ENST00000221847 SMPD1P17405 629 aa18.42■□□□□ 0.54
EBI3-201ENST00000221847 PTGS1P23219 599 aa18.42■□□□□ 0.54
EBI3-201ENST00000221847 PGM5Q15124 567 aa18.42■□□□□ 0.54
EBI3-201ENST00000221847 STXBP2Q15833 593 aa18.42■□□□□ 0.54
EBI3-201ENST00000221847 GJC2Q5T442 439 aaPredicted RBP18.42■□□□□ 0.54
EBI3-201ENST00000221847 TRIM22Q8IYM9 498 aa18.42■□□□□ 0.54
EBI3-201ENST00000221847 ZNF713Q8N859 430 aaPredicted RBP18.42■□□□□ 0.54
EBI3-201ENST00000221847 TBC1D32Q96NH3 1257 aa18.42■□□□□ 0.54
EBI3-201ENST00000221847 RBM47A0AV96 593 aaKnown RBP18.41■□□□□ 0.54
EBI3-201ENST00000221847 ADCY7P51828 1080 aa18.41■□□□□ 0.54
EBI3-201ENST00000221847 IRX5P78411 483 aaPredicted RBP18.41■□□□□ 0.54
EBI3-201ENST00000221847 RABEP1Q15276 862 aa18.41■□□□□ 0.54
EBI3-201ENST00000221847 LRRC41Q15345 812 aa18.41■□□□□ 0.54
EBI3-201ENST00000221847 NECAB2Q7Z6G3 386 aa18.41■□□□□ 0.54
EBI3-201ENST00000221847 VSIG10LQ86VR7 867 aa18.41■□□□□ 0.54
EBI3-201ENST00000221847 ZFP91Q96JP5 570 aaPredicted RBP18.41■□□□□ 0.54
EBI3-201ENST00000221847 RIC8AQ9NPQ8 531 aa18.41■□□□□ 0.54
EBI3-201ENST00000221847 SYNRGQ9UMZ2 1314 aa18.41■□□□□ 0.54
EBI3-201ENST00000221847 DNM1LO00429 736 aa18.4■□□□□ 0.54
EBI3-201ENST00000221847 ADAMTS4O75173 837 aa18.4■□□□□ 0.54
EBI3-201ENST00000221847 EIF3JO75822 258 aaKnown RBP18.4■□□□□ 0.54
EBI3-201ENST00000221847 CTDNEP1O95476 244 aa18.4■□□□□ 0.54
EBI3-201ENST00000221847 SEPT14Q6ZU15 432 aa18.4■□□□□ 0.54
EBI3-201ENST00000221847 SCFD2Q8WU76 684 aa18.4■□□□□ 0.54
EBI3-201ENST00000221847 GTF3C6Q969F1 213 aa18.4■□□□□ 0.54
EBI3-201ENST00000221847 WDR11Q9BZH6 1224 aa18.4■□□□□ 0.54
EBI3-201ENST00000221847 LIMCH1Q9UPQ0 1083 aa18.4■□□□□ 0.54
EBI3-201ENST00000221847 GNEQ9Y223 722 aaKnown RBP18.4■□□□□ 0.54
EBI3-201ENST00000221847 FRMPD4Q14CM0 1322 aa18.4■□□□□ 0.54
EBI3-201ENST00000221847 MKI67P46013 3256 aaKnown RBP18.4■□□□□ 0.54
EBI3-201ENST00000221847 DYNC1LI2O43237 492 aaPredicted RBP18.39■□□□□ 0.53
EBI3-201ENST00000221847 CDKL5O76039 1030 aa18.39■□□□□ 0.53
EBI3-201ENST00000221847 CCND2P30279 289 aa18.39■□□□□ 0.53
EBI3-201ENST00000221847 GJA9P57773 515 aa18.39■□□□□ 0.53
EBI3-201ENST00000221847 DUSP28Q4G0W2 176 aa18.39■□□□□ 0.53
EBI3-201ENST00000221847 RNF180Q86T96 592 aa18.39■□□□□ 0.53
EBI3-201ENST00000221847 UPF3AQ9H1J1 476 aaKnown RBP18.39■□□□□ 0.53
EBI3-201ENST00000221847 C11orf49Q9H6J7 331 aa18.39■□□□□ 0.53
EBI3-201ENST00000221847 VPS54Q9P1Q0 977 aa18.39■□□□□ 0.53
EBI3-201ENST00000221847 TNRC18O15417 2968 aaPredicted RBP18.38■□□□□ 0.53
EBI3-201ENST00000221847 MYADML2A6NDP7 307 aa18.38■□□□□ 0.53
EBI3-201ENST00000221847 SPDYE3A6NKU9 549 aa18.38■□□□□ 0.53
EBI3-201ENST00000221847 KBTBD13C9JR72 458 aa18.38■□□□□ 0.53
EBI3-201ENST00000221847 ADAMTS3O15072 1205 aa18.38■□□□□ 0.53
EBI3-201ENST00000221847 ARIH2O95376 493 aa18.38■□□□□ 0.53
EBI3-201ENST00000221847 DEXIO95424 95 aa18.38■□□□□ 0.53
EBI3-201ENST00000221847 C6orf222P0C671 652 aaPredicted RBP18.38■□□□□ 0.53
EBI3-201ENST00000221847 COL6A1P12109 1028 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms