RNA–Protein interactions for RNA: ENSMUST00000209256.1

Ptpre-202, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-202ENSMUST00000209256 Pram1Q6BCL1 675 aa23■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Zic5Q7TQ40 622 aa23■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Ube2sQ921J4 223 aa23■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Sf3b3Q921M3 1217 aaKnown RBP23■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Prpf3Q922U1 683 aaKnown RBP23■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Capn9Q9D805 690 aa23■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Nfs1Q9Z1J3 459 aa23■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Otud7bB2RUR8 840 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Ccdc152E9PX14 254 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Api5O35841 504 aaKnown RBP22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Gspt2Q149F3 632 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 FAM186AQ9D9R9 1790 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Myh8P13542 1937 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Krt24A1L317 512 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 GabrdP22933 449 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Tmod1P49813 359 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Sec23aQ01405 765 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Ces1eQ64176 562 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Nlrp4fQ66X05 959 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Stambpl1Q76N33 436 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 LnpkQ7TQ95 425 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Rassf6Q80UQ2 353 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Ddx42Q810A7 929 aaKnown RBP22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 OplahQ8K010 1288 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Pcdha5Q91Y15 934 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Plagl2Q925T4 496 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Eif4enif1Q9EST3 983 aaKnown RBP22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Scgb2b12S4R2L0 112 aa22.99■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Apol7aB2RT54 418 aa22.98■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Fam186bD3Z420 943 aa22.98■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Ube4aE9Q735 1028 aa22.98■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Q3TYL0 343 aa22.98■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Wdr60Q8C761 999 aa22.98■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Sumf1Q8R0F3 372 aa22.98■■□□□ 1.27
Ptpre-202ENSMUST00000209256 MymkQ9D1N4 221 aa22.98■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Mroh6V9GX81 722 aa22.98■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Herc3A6H6S0 1050 aa22.98■■□□□ 1.27
Ptpre-202ENSMUST00000209256 ChkbO55229 394 aa22.98■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Pim2Q62070 370 aa22.98■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Ttc22Q8C159 568 aa22.98■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Pip4k2aO70172 405 aa22.97■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Klc1O88447 541 aa22.97■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Slc9a2Q3ZAS0 814 aa22.97■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Kctd16Q5DTY9 427 aa22.97■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Ttf2Q5NC05 1138 aa22.97■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Slc13a4Q8BZ82 625 aa22.97■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Pnpla6Q3TRM4 1355 aa22.97■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Frmd7A2AD83 703 aa22.97■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Zdhhc14Q8BQQ1 489 aa22.97■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Ccdc122Q8BVN0 290 aa22.97■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Slc9b1Q8C0X2 565 aa22.97■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Gm1758F6VZZ1 202 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Chrna9G3X8Z7 479 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Cracr2aQ3UP38 310 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 MycbpapQ5SUV2 932 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Kdm1aQ6ZQ88 853 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Zbed4Q80WQ9 1168 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Pspc1Q8R326 523 aaKnown RBP22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Kcnb1Q03717 857 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Vars2Q3U2A8 1060 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 CpzQ8R4V4 654 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 AfdnQ9QZQ1 1820 aaKnown RBP22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Ubr3Q5U430 1889 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Tcp10bE9PYJ0 438 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Celf1P28659 486 aaKnown RBP22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Ehbp1Q69ZW3 1231 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Ncapg2Q6DFV1 1138 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Xlr3bQ6P205 226 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Pcdhb3Q91XZ7 784 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 PccaQ91ZA3 724 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Armc9Q9D2I5 817 aa22.96■■□□□ 1.27
Ptpre-202ENSMUST00000209256 Hnrnph3D3Z3N4 346 aaKnown RBP22.95■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Nr5a1P33242 462 aa22.95■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Kif1bpQ6ZPU9 617 aa22.95■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Cep104Q80V31 926 aa22.95■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Abcf2Q99LE6 628 aaKnown RBP22.95■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Net1Q9Z206 595 aa22.95■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Gm15262A0A140LIQ5 728 aa22.95■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Myo1fP70248 1099 aa22.95■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Usp20Q8C6M1 916 aa22.95■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Arl2bpQ9D385 163 aa22.95■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Mrpl12Q9DB15 201 aaKnown RBP22.95■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Akap8Q9DBR0 687 aaKnown RBP22.95■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Dennd3A2RT67 1274 aa22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Gm7347D3YYI9 267 aa22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Eftud2O08810 971 aaKnown RBP22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Trappc3O55013 180 aa22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 SncbQ91ZZ3 133 aa22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Slc12a6Q924N4 1150 aa22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Ssr1Q9CY50 286 aaKnown RBP22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 MefvQ9JJ26 767 aa22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Kif13bA0A286YCV9 1847 aa22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Scn11aQ9R053 1765 aa22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Psmd1Q3TXS7 953 aa22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Fam133bQ9CVI2 245 aaKnown RBP22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 4930449I24RikQ9D5E3 319 aa22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Sh2b2Q9JID9 621 aa22.94■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Col11a2Q64739 1736 aa22.93■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Myh15E9Q264 1925 aa22.93■■□□□ 1.26
Ptpre-202ENSMUST00000209256 Map7d1A2AJI0 846 aa22.93■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms