RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 LlphQ9D945 130 aaKnown RBP10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ube3bQ9ES34 1070 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Pmfbp1Q9WVQ0 1022 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 TnksQ6PFX9 1320 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Atp8b3Q6UQ17 1335 aa10.06□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Jakmip2D3YXK0 820 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 MccE9PWI3 1003 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Vwa3bJ9JI28 736 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Cbfa2t2O70374 594 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Sema3fO88632 785 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Tmem63bQ3TWI9 832 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Fam196aQ3USH1 422 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Thsd4Q3UTY6 1018 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Gtf2a2Q80ZM7 109 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Senp7Q8BUH8 1037 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Aldh5a1Q8BWF0 523 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ttll1Q91V51 423 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Coa7Q921H9 231 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Six6os1Q9CTN5 574 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Dmrtc1Q9D9R7 182 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 IcoslgQ9JHJ8 322 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Foxe3Q9QY14 288 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Oaz3Q9R109 243 aa10.05□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ankrd34aB2RW11 495 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Prr22F6TNE3 422 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Kdelc2G5E897 503 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Gm16427J3QN52 483 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Prom1O54990 867 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Mcm4P49717 862 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Grin2cQ01098 1239 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Stk11ipQ3TAA7 1072 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Pde3bQ61409 1100 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ctnna3Q65CL1 895 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Arl14epQ8BIX3 276 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Tdp1Q8BJ37 609 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Rint1Q8BZ36 792 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 DnerQ8JZM4 737 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 GneQ91WG8 722 aaKnown RBP10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Grin3bQ91ZU9 1003 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Dynll2Q9D0M5 89 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ccdc39Q9D5Y1 937 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ddx21Q9JIK5 851 aaKnown RBP10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Zfp292Q9Z2U2 2698 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Sall1Q9ER74 1322 aa10.04□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Robo3Q9Z2I4 1366 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Col4a4Q9QZR9 1682 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Dennd4aE9Q8V6 1869 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ptpn5P54830 541 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 GaaP70699 953 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Etv6P97360 485 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Zfp943Q6NZP4 507 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Zkscan1Q8BGS3 561 aaKnown RBP10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 NkrfQ8BY02 690 aaKnown RBP10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Tmem266Q8BZB3 538 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Brf1Q8CFK2 676 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Tshz3Q8CGV9 1081 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Xpo5Q924C1 1204 aaKnown RBP10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ly6kQ9CWP4 154 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Ccdc7Q9D541 371 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Tbx20Q9ES03 445 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Cdc42ep5Q9Z0X0 150 aa10.03□□□□□ -0.8
Pdlim5-209ENSMUST00000196908 Gm20425E9Q035 978 aaKnown RBP10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Cer1O55233 272 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Smpd2O70572 419 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 P04214 136 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Ifnar1P33896 590 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Mctp2Q5RJH2 878 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Znrf3Q5SSZ7 913 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Amer1Q7TS75 1132 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Prpf38bQ80SY5 542 aaKnown RBP10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Tsen34Q8BMZ5 316 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Olfm5Q8BU90 496 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Morc2bQ8C5W4 1022 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Sf3a1Q8K4Z5 791 aaKnown RBP10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Bloc1s4Q8VED2 215 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Trpv6Q91WD2 767 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Snx29Q9D3S3 818 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Top3bQ9Z321 862 aaKnown RBP10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Tbc1d4Q8BYJ6 1307 aa10.02□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Ppfia1B2RXQ2 1266 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 PtproE9Q612 1226 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 StrnO55106 780 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 PargO88622 969 aaKnown RBP10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Atp6v1dP57746 247 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Zdhhc9P59268 364 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Wdr5P61965 334 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Rnf40Q3U319 1001 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Satb1Q60611 764 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 DbnlQ62418 436 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Zbtb39Q6PDK0 712 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Zdhhc15Q8BGJ0 337 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Scfd1Q8BRF7 639 aaKnown RBP10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Gprasp2Q8BUY8 826 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 ClmnQ8C5W0 1052 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Bag4Q8CI61 457 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Cdk8Q8R3L8 464 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Mfsd5Q921Y4 450 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Tmx2Q9D710 295 aaKnown RBP10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Mlh1Q9JK91 760 aa10.01□□□□□ -0.81
Pdlim5-209ENSMUST00000196908 Hic1Q9R1Y5 733 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms