RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Xrcc4Q924T3 326 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Rhobtb3Q9CTN4 611 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 March8Q9DBD2 286 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Pkd2l2Q9JLG4 621 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Heg1E9Q7X6 1337 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Gm28919A0A087WP35 240 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Tcp1P11983 556 aaKnown RBP12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Arhgef2Q60875 985 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ccna1Q61456 421 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Cep131Q62036 1060 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Asic1Q6NXK8 526 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Mtss1lQ6P9S0 715 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 F13a1Q8BH61 732 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Rasgrp4Q8BTM9 673 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Rab3il1Q8VDV3 383 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Eif4a3Q91VC3 411 aaKnown RBP12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Krt82Q99M74 516 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Pla2g12bQ99P27 195 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Snrnp35Q9D384 244 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Mrpl12Q9DB15 201 aaKnown RBP12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Kank3Q9Z1P7 791 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Adgra3Q7TT36 1310 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Vmn2r78K7N6U5 853 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Nap1l2P51860 460 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Hmgb1P63158 215 aaKnown RBP12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Mum1l1Q4VA55 681 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Cdcp1Q5U462 833 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Tekt3Q6X6Z7 490 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Jade2Q6ZQF7 829 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 DlatQ8BMF4 642 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Tmx4Q8C0L0 335 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Znrd1-asQ8R0E5 213 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ppp1r3gQ9CW07 347 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 ErmardE9Q048 622 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Gm1758F6VZZ1 202 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Tmem132bF7BAB2 1078 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Akr1c19G3X9Y6 323 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Rnaseh1O70338 285 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Scg2Q03517 617 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Tbc1d2bQ3U0J8 965 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Lrrfip1Q3UZ39 729 aaKnown RBP12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Sycp1Q62209 993 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Krt42Q6IFX2 452 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Eef1gQ9D8N0 437 aaKnown RBP12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Prl2c2P04095 224 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Ccdc51Q3URS9 406 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Dnajc17Q91WT4 303 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Ubxn1Q922Y1 297 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Ccdc43Q9CR29 222 aaKnown RBP12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Ndst4Q9EQW8 872 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Irx5Q9JKQ4 484 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 CenphQ9QYM8 241 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Mtmr9Q9Z2D0 545 aa12.52□□□□□ -0.41
Lig1-211ENSMUST00000177588 Trim43aQ3TL54 445 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Spg7Q3ULF4 781 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Glg1Q61543 1175 aaKnown RBP12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Mcm7Q61881 719 aaKnown RBP12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Npdc1Q64322 332 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Ccdc181Q80ZU5 509 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Rnf187Q8BFX1 236 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Ppp2r5dQ91V89 594 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Stat2Q9WVL2 923 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Otud7bB2RUR8 840 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Acot10Q32MW3 439 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Aak1Q3UHJ0 959 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Ankrd13cQ3UX43 541 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Mdh1bQ5F204 500 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Ces3aQ63880 571 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Fam177a1Q8BR63 207 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 GlyctkQ8QZY2 523 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Ces3bQ8VCU1 571 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Mad2l2Q9D752 211 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Akr1b10G5E895 316 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Msh3P13705 1091 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Kcna1P16388 495 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Fnbp1Q80TY0 616 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Arpp21Q9DCB4 807 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Gdf11Q9Z1W4 405 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Psmd10Q9Z2X2 231 aa12.51□□□□□ -0.41
Lig1-211ENSMUST00000177588 Gm45208A0A140LJ36 292 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Ankrd35E9Q9D8 996 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Nfil3O08750 462 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Shc3Q61120 474 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Madcam1Q61826 405 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Pde1cQ64338 706 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Srrm3Q80WV7 648 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 RragaQ80X95 313 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Dlg1Q811D0 905 aaKnown RBP12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Rufy1Q8BIJ7 712 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Rcor2Q8C796 523 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Eif3hQ91WK2 352 aaKnown RBP12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 RpainQ9CWY9 219 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Sept3Q9Z1S5 350 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 GsdmeQ9Z2D3 512 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Mx1P09922 631 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 HmmrQ00547 794 aaKnown RBP12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Armc2Q3URY6 854 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 PRAG1Q571I4 1179 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 Q8BWG4 1187 aa12.5□□□□□ -0.41
Lig1-211ENSMUST00000177588 BlmhQ8R016 455 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms