RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Glrx3Q9CQM9 337 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Stx17Q9D0I4 301 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Efhd1Q9D4J1 240 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Rpf2Q9JJ80 306 aaKnown RBP12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Tmem47Q9JJG6 181 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Mkrn1Q9QXP6 481 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Pcdh11xF6ZNL5 1338 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Ano3A2AHL1 981 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 AgtP11859 477 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Nol4P60954 483 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Scg2Q03517 617 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Serpinb6dQ3UWK8 375 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Znf697Q569E7 569 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Dlg1Q811D0 905 aaKnown RBP12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Znf428Q8C1M2 176 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Mettl5Q8K1A0 209 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 CpzQ8R4V4 654 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Myh4Q5SX39 1939 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Bpifb4A2BGH0 617 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 DgkiD3YWQ0 1071 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Aco1P28271 889 aaKnown RBP12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Cacnb3P54285 484 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Hps5P59438 1126 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 HmmrQ00547 794 aaKnown RBP12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 EregQ61521 162 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Tcp10aQ80W76 438 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 LgsnQ8CIX8 563 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Hs2st1Q8R3H7 356 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Cacnb1Q8R3Z5 597 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 VillQ91YD6 859 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Asic2Q925H0 512 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Dydc1Q9D9T0 175 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Epb41l3Q9WV92 929 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Sipa1l3G3X9J0 1776 aa12.81□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Arhgap6O54834 987 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Hmgb1P63158 215 aaKnown RBP12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Znf667Q2TL60 609 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Prpf38aQ4FK66 312 aaKnown RBP12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Tlr11Q6R5P0 926 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Nop9Q8BMC4 636 aaKnown RBP12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Vps37cQ8R105 352 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Tacc2Q9JJG0 1149 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Acot3Q9QYR7 432 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Gdf11Q9Z1W4 405 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Zmym2Q9CU65 1376 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Greb1lB9EJV3 1913 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Pabpc1lA2A5N3 607 aaKnown RBP12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Chrna9G3X8Z7 479 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Rpusd2Q149F1 553 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Rtkn2Q14B46 604 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Lrrfip1Q3UZ39 729 aaKnown RBP12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Ccdc157Q5SPX1 718 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Mapk6Q61532 720 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Fnbp4Q6ZQ03 1031 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 GopcQ8BH60 463 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Hirip3Q8BLH7 601 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Arhgef19Q8BWA8 802 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Taok3Q8BYC6 898 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Rcor2Q8C796 523 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Ube2q2Q8K2Z8 378 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Olfr805Q8VFI4 319 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Tor1aip1Q921T2 595 aaKnown RBP12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Rnf34Q99KR6 376 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Tmem192Q9CXT7 266 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Mast2Q60592 1734 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 FAM186AQ9D9R9 1790 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Gm7168A0AUV4 508 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 E9QMW4 1145 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Il27raO70394 623 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Nlrx1Q3TL44 975 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Foxd1Q61345 456 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Mettl25Q6NXH8 597 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 March6Q6ZQ89 909 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Gpcpd1Q8C0L9 675 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Zfp446Q8C9M8 523 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Prl7b1Q8CGZ9 251 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Plagl2Q925T4 496 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 AacsQ9D2R0 672 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Gtf2iQ9ESZ8 998 aaKnown RBP12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Psmd10Q9Z2X2 231 aa12.8□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Vmn2r71L7N2D8 855 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Snap25P60879 206 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Sap30bpQ02614 308 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Chrna5Q2MKA5 467 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Klra4Q60651 263 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Krt74Q6IFZ9 495 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Atxn2lQ7TQH0 1049 aaKnown RBP12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Ublcp1Q8BGR9 318 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Klhl7Q8BUL5 586 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Slc4a8Q8JZR6 1089 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 HibadhQ99L13 335 aaKnown RBP12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 1700020D05RikQ99PB1 294 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Golph3Q9CRA5 298 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Saal1Q9D2C2 474 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Spocd1B1ASB6 936 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Akr1b10G5E895 316 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Eya3P97480 510 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Ndufab1Q9CR21 156 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Six6os1Q9CTN5 574 aa12.79□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Alpk1Q9CXB8 1231 aa12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms