RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Spef2Q8C9J3 1734 aa11.34□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Zbtb8osQ505B7 168 aa11.34□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Fam170aQ66LM6 333 aa11.34□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Psmg1Q9JK23 289 aa11.34□□□□□ -0.59
Scn8a-201ENSMUST00000082209 Rabgap1A2AWA9 1064 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Pde11aP0C1Q2 933 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 ZfaP23607 742 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Agap2Q3UHD9 1186 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Fbxo11Q7TPD1 930 aaKnown RBP11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 L3mbtl3Q8BLB7 883 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Znf76Q8BMU0 568 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Svs3bQ8BZH8 265 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 HmcesQ8R1M0 353 aaKnown RBP11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Mmrn1B2RPV6 1210 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 PpargP37238 505 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Nr2f2P43135 414 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Cav1P49817 178 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Tubgcp3P58854 905 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Kctd6Q8BNL5 237 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ppp4r1Q8K2V1 951 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Vps37bQ8R0J7 285 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Znf638Q61464 1960 aaKnown RBP11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Sap130Q8BIH0 1057 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Mdh1bQ5F204 500 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Elf1Q60775 612 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 AdarQ99MU3 1178 aaKnown RBP11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Rnf6Q9DBU5 667 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Wdr19Q3UGF1 1341 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Trim72Q1XH17 477 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Gm3414Q3TNU4 584 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ankk1Q8BZ25 745 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 MesdQ9ERE7 224 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Asic4Q7TNS7 539 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Aifm3Q3TY86 605 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Stk38lQ7TSE6 464 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Nxf1Q99JX7 618 aaKnown RBP11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Rwdd2aQ9D9S3 292 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Slc13a1Q9JHI4 594 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Tspyl4Q8VD63 406 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 RpainQ9CWY9 219 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Usp14Q9JMA1 493 aaKnown RBP11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Stox1B2RQL2 990 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Itih1Q61702 907 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 TrhQ62361 256 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Prpf3Q922U1 683 aaKnown RBP11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Them5Q9CQJ0 248 aa11.33□□□□□ -0.6
Scn8a-201ENSMUST00000082209 4932429P05RikA2ADI4 785 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 SelenovD3YXG1 328 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Spata4Q8K3V1 295 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Pip4k2cQ91XU3 421 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Setbp1Q9Z180 1582 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 NhsB1AV60 1647 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Maml3D4QGC2 1135 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 MaddQ80U28 1577 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Adarb2Q9JI20 745 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Erbb3Q61526 1339 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 GsnP13020 780 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Casq2O09161 415 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Fam81aQ3UXZ6 364 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 CtsqQ91ZF4 343 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 EhhadhQ9DBM2 718 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Rnf207Q3V3A7 635 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Fam133bQ9CVI2 245 aaKnown RBP11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Zcrb1Q9CZ96 217 aaKnown RBP11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Cyp2j7A0A140T8U1 504 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Gm38392E9Q2A2 434 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Actn3O88990 900 aaKnown RBP11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Stat5bP42232 786 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Tor4aQ8BH02 426 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Per2O54943 1257 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Dcaf15Q6PFH3 600 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 GmipQ6PGG2 971 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Pstpip2Q99M15 334 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Fmnl1Q9JL26 1094 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Pcdhb9E9Q5G2 828 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Sap30bpQ02614 308 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Serpinb13Q8CDC0 389 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Llcfc1Q9D9P8 108 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Pex3Q9QXY9 372 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 StrnO55106 780 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Idh1O88844 414 aaKnown RBP11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ripor2Q80U16 1078 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ipo5Q8BKC5 1097 aaKnown RBP11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Serpinb10Q8K1K6 397 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Arl2bpQ9D385 163 aa11.32□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ttc13A0A1L1SSC7 844 aa11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Mdh1P14152 334 aa11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ca8P28651 291 aa11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Prmt9Q3U3W5 846 aa11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Ccdc33Q3ULW6 985 aa11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Prpsap2Q8R574 369 aa11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Sgk1Q9WVC6 431 aa11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 LmnaP48678 665 aaKnown RBP11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Lrrc59Q922Q8 307 aaKnown RBP11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Dbn1Q9QXS6 706 aa11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 A0A286YCQ6 122 aa11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Stx1bP61264 288 aa11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Kmt5aQ2YDW7 349 aa11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Tmtc4Q8BG19 741 aa11.31□□□□□ -0.6
Scn8a-201ENSMUST00000082209 Stn1Q8K2X3 378 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms