RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Plcg1Q62077 1302 aa25.74■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Acad12D3Z7X0 555 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Akr1c19G3X9Y6 323 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Bin1O08539 588 aaKnown RBP25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 FlgP11088 336 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 LtbrP50284 415 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Lrrcc1Q69ZB0 1026 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Gpbp1Q6NXH3 473 aaKnown RBP25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Ccdc189Q6NZQ0 333 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Mtss1lQ6P9S0 715 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Zdhhc14Q8BQQ1 489 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Senp7Q8BUH8 1037 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Pex3Q9QXY9 372 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Fyb2A2A995 729 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Ccnd3P30282 292 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Ccna1Q61456 421 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Znf618Q80YY7 953 aaKnown RBP25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 DnerQ8JZM4 737 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Il31raQ8K5B1 716 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Tfr2Q9JKX3 798 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Stxbp4Q9WV89 557 aa25.73■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Atp2b1G5E829 1220 aa25.72■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Dync1i1O88485 628 aa25.72■■□□□ 1.71
Upf3a-201ENSMUST00000043767 SsbP32067 415 aaKnown RBP25.72■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Rgl2Q61193 778 aa25.72■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Tsen34Q8BMZ5 316 aa25.72■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Serpinb13Q8CDC0 389 aa25.72■■□□□ 1.71
Upf3a-201ENSMUST00000043767 MbipQ99LQ1 341 aa25.72■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Sycp2lA0A0M3U1B0 842 aa25.72■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Rsph10bE9PYQ0 876 aa25.72■■□□□ 1.71
Upf3a-201ENSMUST00000043767 E2f4Q8R0K9 410 aa25.72■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Nlrx1Q3TL44 975 aa25.71■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Grik5Q61626 979 aa25.71■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Fam83aQ8K2P2 436 aa25.71■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Golph3lQ8R088 285 aaKnown RBP25.71■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Tlcd1Q99JT6 247 aa25.71■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Prg3Q9JL95 222 aa25.71■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Krt78E9Q0F0 1068 aa25.7■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Nr1i2O54915 431 aa25.7■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Hoxc10P31257 342 aa25.7■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Cdc25aP48964 514 aa25.7■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Znf219Q6IQX8 726 aa25.7■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Lmbrd1Q8K0B2 537 aa25.7■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Fem1bQ9Z2G0 627 aa25.7■■□□□ 1.71
Upf3a-201ENSMUST00000043767 Ccdc88cQ6VGS5 2009 aa25.7■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Rps6P62754 249 aaKnown RBP25.7■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Islr2Q5RKR3 745 aa25.7■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Mov10l1Q99MV5 1187 aa25.7■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Tmx2Q9D710 295 aaKnown RBP25.7■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Ngly1Q9JI78 651 aa25.7■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Arl6ip4Q9JM93 229 aa25.7■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Vav3Q9R0C8 847 aa25.7■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Cst8P32766 142 aa25.69■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Stim2P83093 746 aa25.69■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Nxf2Q4ZGD8 691 aa25.69■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Sun3Q5SS91 320 aa25.69■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Ttc8Q8VD72 515 aa25.69■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Kdm4bQ91VY5 1086 aa25.69■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Mkrn1Q9QXP6 481 aa25.69■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Gm5737A0A140LI11 423 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Mpp3O88910 568 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Secisbp2lQ6A098 1086 aaKnown RBP25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Recql4Q75NR7 1216 aaKnown RBP25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 GypcQ78HU7 95 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Ago4Q8CJF8 861 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Fbxo18Q8K2I9 1042 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Nrbp1Q99J45 535 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Serpinb3bQ9D1Q5 387 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Celf2Q9Z0H4 508 aaKnown RBP25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Ttc6G3UYY4 1857 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Disp2Q8CIP5 1345 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Eepd1Q3TGW2 569 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Lrrc36Q3V0M2 755 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Nlrp2Q4PLS0 1046 aaKnown RBP25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Nlgn2Q69ZK9 836 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Ccz1Q8C1Y8 480 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Syne4Q8CII8 388 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Krt82Q99M74 516 aa25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Fxr2Q9WVR4 673 aaKnown RBP25.68■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Serpina16D3Z660 418 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Stx1aO35526 288 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Nf2P46662 596 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Atp11aP98197 1187 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Ints4Q8CIM8 964 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Cabp7Q91ZM8 215 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 BccipQ9CWI3 316 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Col11a1Q61245 1804 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Oip5A2AQ14 241 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Atoh1P48985 351 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Olfm4Q3UZZ4 505 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 P2ry10Q8BFU7 328 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 NapaQ9DB05 295 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Syt10Q9R0N4 523 aa25.67■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Nap1l4Q78ZA7 375 aaKnown RBP25.66■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Stard7Q8R1R3 373 aa25.66■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Pcdha4O88689 947 aa25.65■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Stat3P42227 770 aaKnown RBP25.65■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Tnnt2P50752 301 aa25.65■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Fam13bQ8K2H3 851 aa25.65■■□□□ 1.7
Upf3a-201ENSMUST00000043767 Sbf2E9PXF8 1872 aa25.65■■□□□ 1.7
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms