RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Cfap70D3YVL2 1141 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Vmn2r79E9Q067 851 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Pgrmc1O55022 195 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 CatspereP0DP43 985 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Hdhd2Q3UGR5 259 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Vmn1r209Q5NC97 312 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Nop9Q8BMC4 636 aaKnown RBP9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Iws1Q8C1D8 766 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 E2f4Q8R0K9 410 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Serpinb3bQ9D1Q5 387 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 DonsonQ9QXP4 560 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gm5114W4VSN8 858 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Actn3O88990 900 aaKnown RBP9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 CebpaP53566 359 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Setd4P58467 439 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Stap2Q8R0L1 411 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Dph6Q9CQ28 267 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Pde4aO89084 844 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Capza3P70190 299 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 KaznQ69ZS8 779 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Atp1a2Q6PIE5 1020 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Lin9Q8C735 542 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ddx41Q91VN6 622 aaKnown RBP9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ssr1Q9CY50 286 aaKnown RBP9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Inpp4aQ9EPW0 939 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gm10110D3Z5M2 615 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Atp8b1Q148W0 1251 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Dpf2Q61103 391 aaKnown RBP9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 D130040H23RikQ8BII3 405 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Snip1Q8BIZ6 383 aaKnown RBP9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Def6Q8C2K1 630 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Appl2Q8K3G9 662 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Pstpip2Q99M15 334 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Clul1Q3ZRW6 464 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 MmeQ61391 750 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Pank4Q80YV4 820 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ms4a5Q810P8 197 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Spata32Q8C5V0 334 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gpsm2Q8VDU0 679 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 PdclQ9DBX2 301 aa9.35□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 MycnP03966 462 aaKnown RBP9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Cct6aP80317 531 aaKnown RBP9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Nell2Q61220 819 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Trmt2aQ8BNV1 574 aaKnown RBP9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ces1Q8VCC2 565 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 ArcQ9WV31 396 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Gm7168A0AUV4 508 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 CalrP14211 416 aaKnown RBP9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Cetn1P41209 172 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ddx3yQ62095 658 aaKnown RBP9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Dlg1Q811D0 905 aaKnown RBP9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Cbwd1Q8VEH6 393 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Dhx30Q99PU8 1217 aaKnown RBP9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Tube1Q9D6T1 475 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Mipol1Q9D9F8 279 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Rapgef1Q3UHC1 1224 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 IbspQ61711 324 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ccdc148Q6P5U8 527 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Q6PD19 689 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Slc9c1Q6UJY2 1175 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Micall1Q8BGT6 870 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Stoml1Q8CI66 399 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Eif3cQ8R1B4 911 aaKnown RBP9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Erp44Q9D1Q6 406 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Arap2Q8BZ05 1703 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Dnajc21E9Q8D0 531 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Zfp213E9QAW0 468 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Vmn2r78K7N6U5 853 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Sfi1Q3UZY0 1216 aaKnown RBP9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Foxn3Q499D0 457 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Kctd3Q8BFX3 815 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Depdc1bQ8BH88 529 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 CnstQ8CBC4 711 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Rpap2Q8VC34 614 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Mmtag2Q99LX5 260 aaKnown RBP9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 1700020D05RikQ99PB1 294 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Lonp2Q9DBN5 852 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Ifi202Q9R002 445 aa9.34□□□□□ -0.91
Sf3b1-201ENSMUST00000027127 Trappc11B2RXC1 1133 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Gm38392E9Q2A2 434 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Zfp597E9Q6S0 419 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Nr2f2P43135 414 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Efcab8Q8C9R9 203 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Mboat7Q8CHK3 473 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Apbb1ipQ8R5A3 670 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 PccaQ91ZA3 724 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Tmem132bF7BAB2 1078 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Mdh1P14152 334 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 OatP29758 439 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Nhej1Q3KNJ2 295 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ap5z1Q3U829 807 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Bbof1Q3V079 533 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Ehbp1Q69ZW3 1231 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Zbtb39Q6PDK0 712 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Tada3Q8R0L9 432 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Enox2Q8R0Z2 598 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Atp1a1Q8VDN2 1023 aaKnown RBP9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Cetn2Q9R1K9 172 aa9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Lmnb2P21619 596 aaKnown RBP9.33□□□□□ -0.92
Sf3b1-201ENSMUST00000027127 Nedd1P33215 660 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms