RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 MycnP03966 462 aaKnown RBP10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Fkbp1aP26883 108 aaKnown RBP10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Polr2fP61219 127 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Gm5169Q5M8P2 212 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Skor1Q8BX46 964 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Fermt3Q8K1B8 665 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Osbpl1aQ91XL9 950 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Sertad1Q9JL10 236 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 DohhA0A1Y7VJ29 135 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Rsrc2A2RTL5 376 aaKnown RBP10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Serpina16D3Z660 418 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Gm4307E9PZY4 289 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Gm4312K9J7E2 289 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Snx12O70493 165 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Snap25P60879 206 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Surf6P70279 355 aaKnown RBP10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Mybpc2Q5XKE0 1136 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Mapk6Q61532 720 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Glra4Q61603 456 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Kif5bQ61768 963 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Ddx19bQ8BZY3 494 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Ccdc38Q8CDN8 563 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Cfap53Q9D439 514 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Tube1Q9D6T1 475 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 CoasyQ9DBL7 563 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Git2Q9JLQ2 708 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Gdap1O88741 358 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Tal1P22091 329 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Hook2Q7TMK6 716 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Bpifb6Q8BU51 449 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Trim9Q8C7M3 817 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Sox30Q8CGW4 782 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Pcdhgc5Q91XW9 944 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Uap1Q91YN5 522 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 AtrnQ9WU60 1428 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Xrcc6P23475 608 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 HelqQ2VPA6 1069 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Kctd16Q5DTY9 427 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Nek5Q7TSC3 627 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Sgsm1Q8BPQ7 1093 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Ccdc113Q8C5T8 377 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Gramd4Q8CB44 633 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Usp27Q8CEG8 438 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Usp15Q8R5H1 981 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 SfpqQ8VIJ6 699 aaKnown RBP10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Scrn1Q9CZC8 414 aa10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Zranb2Q9R020 330 aaKnown RBP10.43□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Plekhg2Q6KAU7 1340 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 MetP16056 1379 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Gm13023A2A8N2 498 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Tmem132bF7BAB2 1078 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Clul1Q3ZRW6 464 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 NfrkbQ6PIJ4 1296 aaKnown RBP10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Leng8Q8CBY3 785 aaKnown RBP10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 TbcbQ9D1E6 244 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Krt34Q9D646 392 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Mad2l2Q9D752 211 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Eftud2O08810 971 aaKnown RBP10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Parp2O88554 559 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Nr2f2P43135 414 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Rpl13P47963 211 aaKnown RBP10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Tbc1d9bQ5SVR0 1263 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Ankrd24Q80VM7 985 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Pspc1Q8R326 523 aaKnown RBP10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 SyncQ9EPM5 470 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Arl6ip4Q9JM93 229 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Azi2Q9QYP6 405 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Tns2Q8CGB6 1400 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Crb1Q8VHS2 1405 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Gm36210A0A1B0GS00 229 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Herc3A6H6S0 1050 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Slc2a13Q3UHK1 637 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Tlr11Q6R5P0 926 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Bicd1Q8BR07 835 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Fam228aQ8CDW1 299 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Kank3Q9Z1P7 791 aa10.42□□□□□ -0.74
Col6a1-201ENSMUST00000001147 E9QMW4 1145 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Kcna1P16388 495 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Map2k1P31938 393 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Kcnd1Q03719 651 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Nsrp1Q5NCR9 542 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Exoc3Q6KAR6 755 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Depdc1bQ8BH88 529 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Mtfr1lQ9CWE0 289 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Paip2Q9D6V8 124 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Ap1m1P35585 423 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Mybl2P48972 704 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 GartQ64737 1010 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 LgsnQ8CIX8 563 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Trmt44Q9D2Q2 713 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Ctnna1P26231 906 aaKnown RBP10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Nedd4P46935 887 aaKnown RBP10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Irx1P81068 480 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Stim2P83093 746 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Lig3P97386 1015 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Ica1lQ3TY65 431 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Sp4Q62445 782 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Micall1Q8BGT6 870 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Tbx22Q8K402 517 aa10.41□□□□□ -0.74
Col6a1-201ENSMUST00000001147 Dact1Q8R4A3 778 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms