RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 TY1A-GR2Q12485 440 aa9.12□□□□□ -0.95
snR56snR56 SEC2P17065 759 aa9.11□□□□□ -0.95
snR56snR56 CST6P40535 587 aa9.11□□□□□ -0.95
snR56snR56 MVP1P40959 511 aaKnown RBP9.11□□□□□ -0.95
snR56snR56 VPS70P47161 811 aa9.11□□□□□ -0.95
snR56snR56 GCD11P32481 527 aaKnown RBP9.09□□□□□ -0.95
snR56snR56 AIR1P40507 360 aaKnown RBP9.07□□□□□ -0.96
snR56snR56 LAM6Q08001 693 aa9.07□□□□□ -0.96
snR56snR56 CLA4P48562 842 aa9.06□□□□□ -0.96
snR56snR56 SPT16P32558 1035 aaKnown RBP9.05□□□□□ -0.96
snR56snR56 RGR1P19263 1082 aa9.04□□□□□ -0.96
snR56snR56 YPR109WQ06104 294 aa9.03□□□□□ -0.96
snR56snR56 BRE2P43132 505 aa9.02□□□□□ -0.97
snR56snR56 YPL062WQ02781 134 aa8.99□□□□□ -0.97
snR56snR56 RRN7P40992 514 aa8.98□□□□□ -0.97
snR56snR56 FRK1Q03002 865 aaPredicted RBP8.97□□□□□ -0.97
snR56snR56 BDP1P46678 594 aa8.96□□□□□ -0.98
snR56snR56 GCR2Q01722 534 aa8.96□□□□□ -0.98
snR56snR56 CDC4P07834 779 aa8.94□□□□□ -0.98
snR56snR56 PAT1P25644 796 aaKnown RBP8.93□□□□□ -0.98
snR56snR56 ERF2Q06551 359 aa8.93□□□□□ -0.98
snR56snR56 KEX2P13134 814 aa8.91□□□□□ -0.98
snR56snR56 HED1Q03937 162 aa8.89□□□□□ -0.99
snR56snR56 GAR1P28007 205 aaKnown RBP8.87□□□□□ -0.99
snR56snR56 PSE1P32337 1089 aaKnown RBP8.87□□□□□ -0.99
snR56snR56 CKB1P43639 278 aa8.86□□□□□ -0.99
snR56snR56 PBS2P08018 668 aa8.85□□□□□ -0.99
snR56snR56 MOD5P07884 428 aa8.84□□□□□ -0.99
snR56snR56 PAC1P39946 494 aaKnown RBP8.83□□□□□ -1
snR56snR56 MET22P32179 357 aa8.81□□□□□ -1
snR56snR56 AGE1Q04412 482 aa8.81□□□□□ -1
snR56snR56 GBP2P25555 427 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
snR56snR56 CLB5P30283 435 aa8.79□□□□□ -1
snR56snR56 TUB4P53378 473 aa8.78□□□□□ -1
snR56snR56 ENV9Q08651 330 aa8.78□□□□□ -1
snR56snR56 MET32Q12041 191 aa8.77□□□□□ -1.01
snR56snR56 RTF1P53064 558 aa8.76□□□□□ -1.01
snR56snR56 MAM3Q12296 706 aa8.75□□□□□ -1.01
snR56snR56 ASH1P34233 588 aa8.74□□□□□ -1.01
snR56snR56 YNL115CP53925 644 aa8.73□□□□□ -1.01
snR56snR56 AFT1P22149 690 aa8.72□□□□□ -1.01
snR56snR56 PUS5Q06244 254 aa8.72□□□□□ -1.01
snR56snR56 SIT4P20604 311 aa8.71□□□□□ -1.02
snR56snR56 DSF2P38213 736 aa8.7□□□□□ -1.02
snR56snR56 YDR444WQ04093 687 aa8.7□□□□□ -1.02
snR56snR56 IES2P40154 320 aa8.68□□□□□ -1.02
snR56snR56 HST3P53687 447 aa8.67□□□□□ -1.02
snR56snR56 LCB5Q06147 687 aaKnown RBP8.66□□□□□ -1.02
snR56snR56 TEA1P47988 759 aa8.65□□□□□ -1.02
snR56snR56 NUP42P49686 430 aaKnown RBP8.65□□□□□ -1.02
snR56snR56 TPD3P31383 635 aa8.64□□□□□ -1.03
snR56snR56 SAS10Q12136 610 aaPredicted RBP8.64□□□□□ -1.03
snR56snR56 NIS1P53939 407 aa8.63□□□□□ -1.03
snR56snR56 YDL176WQ12027 708 aa8.62□□□□□ -1.03
snR56snR56 RRD1P40454 393 aaKnown RBP8.61□□□□□ -1.03
snR56snR56 YJR115WP47152 169 aa8.61□□□□□ -1.03
snR56snR56 KXD1P53158 218 aa8.61□□□□□ -1.03
snR56snR56 HXT10P43581 546 aa8.59□□□□□ -1.03
snR56snR56 PDC1P06169 563 aaKnown RBP8.57□□□□□ -1.04
snR56snR56 DIT2P21595 489 aa8.57□□□□□ -1.04
snR56snR56 SYH1Q02875 849 aaKnown RBP8.55□□□□□ -1.04
snR56snR56 MSB3P48566 633 aaPredicted RBP8.54□□□□□ -1.04
snR56snR56 FPK1P53739 893 aa8.54□□□□□ -1.04
snR56snR56 SLY41P22215 453 aa8.53□□□□□ -1.04
snR56snR56 SPB4P25808 606 aaPredicted RBP8.49□□□□□ -1.05
snR56snR56 RPA14P50106 137 aa8.48□□□□□ -1.05
snR56snR56 YMR196WQ04336 1088 aa8.48□□□□□ -1.05
snR56snR56 YPR097WQ06839 1073 aa8.48□□□□□ -1.05
snR56snR56 PUS6P53294 404 aa8.47□□□□□ -1.05
snR56snR56 ALR1Q08269 859 aa8.47□□□□□ -1.05
snR56snR56 DMA1P38823 416 aa8.46□□□□□ -1.06
snR56snR56 UGA3P26370 528 aa8.45□□□□□ -1.06
snR56snR56 YDL206WQ12424 762 aa8.45□□□□□ -1.06
snR56snR56 PTK2P47116 818 aaKnown RBP8.44□□□□□ -1.06
snR56snR56 SCJ1P25303 377 aa8.43□□□□□ -1.06
snR56snR56 ACO2P39533 789 aa8.43□□□□□ -1.06
snR56snR56 HST2P53686 357 aa8.43□□□□□ -1.06
snR56snR56 KIP2P28743 706 aa8.42□□□□□ -1.06
snR56snR56 MRT4P33201 236 aaKnown RBP8.42□□□□□ -1.06
snR56snR56 BUB1P41695 1021 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
snR56snR56 TBF1Q02457 562 aa8.42□□□□□ -1.06
snR56snR56 TRM1P15565 570 aaKnown RBP8.41□□□□□ -1.06
snR56snR56 OPT2Q06593 877 aa8.41□□□□□ -1.06
snR56snR56 IXR1P33417 597 aa8.4□□□□□ -1.06
snR56snR56 CAF120P53836 1060 aa8.4□□□□□ -1.06
snR56snR56 SRF1Q12516 437 aa8.38□□□□□ -1.07
snR56snR56 YLR346CQ06139 101 aa8.37□□□□□ -1.07
snR56snR56 NUP85P46673 744 aa8.36□□□□□ -1.07
snR56snR56 MMP1Q12372 583 aa8.36□□□□□ -1.07
snR56snR56 RTT106P40161 455 aa8.35□□□□□ -1.07
snR56snR56 GLY1P37303 387 aaKnown RBP8.34□□□□□ -1.07
snR56snR56 GLN1P32288 370 aaKnown RBP8.31□□□□□ -1.08
snR56snR56 TYW1Q08960 810 aaKnown RBP8.31□□□□□ -1.08
snR56snR56 VAC17P25591 423 aa8.3□□□□□ -1.08
snR56snR56 ESS1P22696 170 aa8.29□□□□□ -1.08
snR56snR56 ATF2P53296 535 aa8.29□□□□□ -1.08
snR56snR56 YIR007WP40566 764 aa8.28□□□□□ -1.08
snR56snR56 TY1A-BLQ12266 440 aa8.28□□□□□ -1.08
snR56snR56 MIP1P15801 1254 aa8.27□□□□□ -1.09
snR56snR56 SCW11P53189 542 aa8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms