RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeastyeast

Gene MSS18, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS18YPR134W TY1A-MR2P0CX69 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-JR2P47099 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-DR1Q03856 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-ML1Q04706 440 aaKnown RBP6.51□□□□□ -1.37
MSS18YPR134W TY1A-BRQ12217 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-NL2Q12470 440 aa6.51□□□□□ -1.37
MSS18YPR134W TY1A-GR2Q12485 440 aa6.51□□□□□ -1.37
MSS18YPR134W SEC2P17065 759 aa6.5□□□□□ -1.37
MSS18YPR134W SPT16P32558 1035 aaKnown RBP6.5□□□□□ -1.37
MSS18YPR134W TRK1P12685 1235 aa6.49□□□□□ -1.37
MSS18YPR134W KEX2P13134 814 aa6.48□□□□□ -1.37
MSS18YPR134W RRN7P40992 514 aa6.48□□□□□ -1.37
MSS18YPR134W MAM3Q12296 706 aa6.48□□□□□ -1.37
MSS18YPR134W PSE1P32337 1089 aaKnown RBP6.47□□□□□ -1.37
MSS18YPR134W CST6P40535 587 aa6.47□□□□□ -1.37
MSS18YPR134W ERF2Q06551 359 aa6.47□□□□□ -1.37
MSS18YPR134W RQC2Q12532 1038 aaKnown RBP6.46□□□□□ -1.38
MSS18YPR134W CLB5P30283 435 aa6.45□□□□□ -1.38
MSS18YPR134W DSF2P38213 736 aa6.45□□□□□ -1.38
MSS18YPR134W IES2P40154 320 aa6.45□□□□□ -1.38
MSS18YPR134W FRK1Q03002 865 aaPredicted RBP6.45□□□□□ -1.38
MSS18YPR134W SPB4P25808 606 aaPredicted RBP6.44□□□□□ -1.38
MSS18YPR134W AIR1P40507 360 aaKnown RBP6.43□□□□□ -1.38
MSS18YPR134W CLA4P48562 842 aa6.43□□□□□ -1.38
MSS18YPR134W PAT1P25644 796 aaKnown RBP6.42□□□□□ -1.38
MSS18YPR134W LAM6Q08001 693 aa6.4□□□□□ -1.38
MSS18YPR134W BDP1P46678 594 aa6.39□□□□□ -1.39
MSS18YPR134W DIT2P21595 489 aa6.37□□□□□ -1.39
MSS18YPR134W NUP42P49686 430 aaKnown RBP6.37□□□□□ -1.39
MSS18YPR134W PAC1P39946 494 aaKnown RBP6.36□□□□□ -1.39
MSS18YPR134W TEA1P47988 759 aa6.35□□□□□ -1.39
MSS18YPR134W RTF1P53064 558 aa6.34□□□□□ -1.39
MSS18YPR134W TUB4P53378 473 aa6.34□□□□□ -1.39
MSS18YPR134W YNL115CP53925 644 aa6.32□□□□□ -1.4
MSS18YPR134W AGE1Q04412 482 aa6.32□□□□□ -1.4
MSS18YPR134W BRE2P43132 505 aa6.31□□□□□ -1.4
MSS18YPR134W NIS1P53939 407 aa6.31□□□□□ -1.4
MSS18YPR134W PUS5Q06244 254 aa6.31□□□□□ -1.4
MSS18YPR134W CDC4P07834 779 aa6.29□□□□□ -1.4
MSS18YPR134W GCR2Q01722 534 aa6.28□□□□□ -1.4
MSS18YPR134W SIT4P20604 311 aa6.27□□□□□ -1.41
MSS18YPR134W HED1Q03937 162 aa6.27□□□□□ -1.41
MSS18YPR134W YMR196WQ04336 1088 aa6.27□□□□□ -1.41
MSS18YPR134W MOD5P07884 428 aa6.26□□□□□ -1.41
MSS18YPR134W SLY41P22215 453 aa6.26□□□□□ -1.41
MSS18YPR134W GAR1P28007 205 aaKnown RBP6.26□□□□□ -1.41
MSS18YPR134W FPK1P53739 893 aa6.26□□□□□ -1.41
MSS18YPR134W SCJ1P25303 377 aa6.24□□□□□ -1.41
MSS18YPR134W RGA1P39083 1007 aa6.24□□□□□ -1.41
MSS18YPR134W KXD1P53158 218 aa6.23□□□□□ -1.41
MSS18YPR134W ATF2P53296 535 aa6.23□□□□□ -1.41
MSS18YPR134W ASH1P34233 588 aa6.22□□□□□ -1.41
MSS18YPR134W MET32Q12041 191 aa6.22□□□□□ -1.41
MSS18YPR134W GBP2P25555 427 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
MSS18YPR134W YNR021WP53723 404 aaKnown RBP6.21□□□□□ -1.42
MSS18YPR134W PDC1P06169 563 aaKnown RBP6.18□□□□□ -1.42
MSS18YPR134W GLC3P32775 704 aa6.18□□□□□ -1.42
MSS18YPR134W HXT10P43581 546 aa6.18□□□□□ -1.42
MSS18YPR134W HST3P53687 447 aa6.18□□□□□ -1.42
MSS18YPR134W TBF1Q02457 562 aa6.18□□□□□ -1.42
MSS18YPR134W TPD3P31383 635 aa6.17□□□□□ -1.42
MSS18YPR134W MET22P32179 357 aa6.16□□□□□ -1.42
MSS18YPR134W PUS6P53294 404 aa6.16□□□□□ -1.42
MSS18YPR134W HST2P53686 357 aa6.16□□□□□ -1.42
MSS18YPR134W MMP1Q12372 583 aa6.16□□□□□ -1.42
MSS18YPR134W YDL206WQ12424 762 aa6.16□□□□□ -1.42
MSS18YPR134W TRM1P15565 570 aaKnown RBP6.15□□□□□ -1.42
MSS18YPR134W ESS1P22696 170 aa6.15□□□□□ -1.42
MSS18YPR134W RRD1P40454 393 aaKnown RBP6.15□□□□□ -1.42
MSS18YPR134W AFT1P22149 690 aa6.14□□□□□ -1.43
MSS18YPR134W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
MSS18YPR134W ALR1Q08269 859 aa6.14□□□□□ -1.43
MSS18YPR134W TYW1Q08960 810 aaKnown RBP6.14□□□□□ -1.43
MSS18YPR134W AIM7Q12156 149 aa6.14□□□□□ -1.43
MSS18YPR134W GLN1P32288 370 aaKnown RBP6.13□□□□□ -1.43
MSS18YPR134W YPL062WQ02781 134 aa6.13□□□□□ -1.43
MSS18YPR134W SYH1Q02875 849 aaKnown RBP6.13□□□□□ -1.43
MSS18YPR134W KIP2P28743 706 aa6.12□□□□□ -1.43
MSS18YPR134W RPA14P50106 137 aa6.12□□□□□ -1.43
MSS18YPR134W RGA2Q06407 1009 aa6.12□□□□□ -1.43
MSS18YPR134W YJR115WP47152 169 aa6.11□□□□□ -1.43
MSS18YPR134W YJU3P28321 313 aa6.1□□□□□ -1.43
MSS18YPR134W YDR444WQ04093 687 aa6.1□□□□□ -1.43
MSS18YPR134W YPR097WQ06839 1073 aa6.1□□□□□ -1.43
MSS18YPR134W ENV9Q08651 330 aa6.1□□□□□ -1.43
MSS18YPR134W IXR1P33417 597 aa6.09□□□□□ -1.43
MSS18YPR134W RTT106P40161 455 aa6.07□□□□□ -1.44
MSS18YPR134W UGA3P26370 528 aa6.06□□□□□ -1.44
MSS18YPR134W PKH3Q03306 898 aaPredicted RBP6.06□□□□□ -1.44
MSS18YPR134W KTR1P27810 393 aaKnown RBP6.05□□□□□ -1.44
MSS18YPR134W LCB5Q06147 687 aaKnown RBP6.05□□□□□ -1.44
MSS18YPR134W MSB3P48566 633 aaPredicted RBP6.04□□□□□ -1.44
MSS18YPR134W ITT1Q04638 464 aa6.04□□□□□ -1.44
MSS18YPR134W LEU3P08638 886 aa6.03□□□□□ -1.44
MSS18YPR134W ARG8P18544 423 aa6.03□□□□□ -1.44
MSS18YPR134W SRF1Q12516 437 aa6.03□□□□□ -1.44
MSS18YPR134W CSN12P47130 423 aa6.01□□□□□ -1.45
MSS18YPR134W SSA2P10592 639 aaKnown RBP6□□□□□ -1.45
MSS18YPR134W RSC30P38781 883 aa6□□□□□ -1.45
MSS18YPR134W PTK2P47116 818 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms