RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C SNF2P22082 1703 aa4.06□□□□□ -1.76
ATG11YPR049C YLR271WQ06152 274 aa4.06□□□□□ -1.76
ATG11YPR049C TFG1P41895 735 aaPredicted RBP4.05□□□□□ -1.76
ATG11YPR049C SPB4P25808 606 aaPredicted RBP4.04□□□□□ -1.76
ATG11YPR049C BNR1P40450 1375 aa4.03□□□□□ -1.76
ATG11YPR049C URB1P34241 1764 aaKnown RBP4.03□□□□□ -1.76
ATG11YPR049C MAK10Q02197 733 aa4.03□□□□□ -1.76
ATG11YPR049C SIS1P25294 352 aaKnown RBP4.01□□□□□ -1.77
ATG11YPR049C BDF1P35817 686 aa4.01□□□□□ -1.77
ATG11YPR049C PEX29Q03370 554 aa4.01□□□□□ -1.77
ATG11YPR049C YOR238WQ08634 303 aa4.01□□□□□ -1.77
ATG11YPR049C TY4B-HP0C2J7 1802 aa4.01□□□□□ -1.77
ATG11YPR049C TY4B-JP47024 1803 aa4.01□□□□□ -1.77
ATG11YPR049C GLN1P32288 370 aaKnown RBP4□□□□□ -1.77
ATG11YPR049C EDE1P34216 1381 aa4□□□□□ -1.77
ATG11YPR049C RTG3P38165 486 aa4□□□□□ -1.77
ATG11YPR049C YAP3P38749 330 aa4□□□□□ -1.77
ATG11YPR049C KIC1P38692 1080 aa3.99□□□□□ -1.77
ATG11YPR049C IFH1P39520 1085 aa3.98□□□□□ -1.77
ATG11YPR049C YAP5P40574 245 aa3.98□□□□□ -1.77
ATG11YPR049C CST9Q06032 482 aa3.98□□□□□ -1.77
ATG11YPR049C ATH1P48016 1211 aa3.98□□□□□ -1.77
ATG11YPR049C CFT1Q06632 1357 aaKnown RBP3.97□□□□□ -1.77
ATG11YPR049C GEA1P47102 1408 aaPredicted RBP3.97□□□□□ -1.77
ATG11YPR049C YCK3P39962 524 aa3.96□□□□□ -1.77
ATG11YPR049C YMR196WQ04336 1088 aa3.96□□□□□ -1.77
ATG11YPR049C YJL171CP46992 396 aa3.96□□□□□ -1.78
ATG11YPR049C YRF1-3P0CX14 1859 aa3.96□□□□□ -1.78
ATG11YPR049C YRF1-7P0CX15 1859 aa3.96□□□□□ -1.78
ATG11YPR049C YRF1-6P53819 1859 aa3.96□□□□□ -1.78
ATG11YPR049C DBP1P24784 617 aaKnown RBP3.95□□□□□ -1.78
ATG11YPR049C SET4P42948 560 aa3.95□□□□□ -1.78
ATG11YPR049C VPS70P47161 811 aa3.94□□□□□ -1.78
ATG11YPR049C TY3B-IQ7LHG5 1498 aaKnown RBP3.94□□□□□ -1.78
ATG11YPR049C DCW1P36091 449 aa3.94□□□□□ -1.78
ATG11YPR049C SPP1Q03012 353 aa3.93□□□□□ -1.78
ATG11YPR049C RPP1BP10622 106 aaKnown RBP3.9□□□□□ -1.79
ATG11YPR049C YIL177CP40434 1758 aa3.89□□□□□ -1.79
ATG11YPR049C YJL225CP40889 1758 aa3.89□□□□□ -1.79
ATG11YPR049C YMR1P47147 688 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
ATG11YPR049C PEX21P50091 288 aa3.89□□□□□ -1.79
ATG11YPR049C GYP5Q12344 894 aa3.89□□□□□ -1.79
ATG11YPR049C RIM15P43565 1770 aa3.88□□□□□ -1.79
ATG11YPR049C GRE2Q12068 342 aaKnown RBP3.88□□□□□ -1.79
ATG11YPR049C SRB8P25648 1427 aa3.88□□□□□ -1.79
ATG11YPR049C YMR074CQ04773 145 aa3.87□□□□□ -1.79
ATG11YPR049C TGL3P40308 642 aa3.86□□□□□ -1.79
ATG11YPR049C THI12P42883 340 aa3.85□□□□□ -1.79
ATG11YPR049C THI5P43534 340 aa3.85□□□□□ -1.79
ATG11YPR049C THI11P47183 340 aa3.85□□□□□ -1.79
ATG11YPR049C THI13Q07748 340 aa3.85□□□□□ -1.79
ATG11YPR049C PDR11P40550 1411 aa3.84□□□□□ -1.79
ATG11YPR049C SET1P38827 1080 aaKnown RBP3.84□□□□□ -1.79
ATG11YPR049C URN1Q06525 465 aaKnown RBP3.84□□□□□ -1.79
ATG11YPR049C ULI1P43604 169 aa3.84□□□□□ -1.8
ATG11YPR049C PSD2P53037 1138 aaKnown RBP3.83□□□□□ -1.8
ATG11YPR049C YBL029C-AQ3E756 94 aa3.83□□□□□ -1.8
ATG11YPR049C APC1P53886 1748 aa3.83□□□□□ -1.8
ATG11YPR049C RCR1P38212 213 aa3.81□□□□□ -1.8
ATG11YPR049C ATF2P53296 535 aa3.81□□□□□ -1.8
ATG11YPR049C ELP4Q02884 456 aaKnown RBP3.81□□□□□ -1.8
ATG11YPR049C RTT106P40161 455 aa3.81□□□□□ -1.8
ATG11YPR049C HTA1P04911 132 aaKnown RBP3.8□□□□□ -1.8
ATG11YPR049C HTA2P04912 132 aa3.8□□□□□ -1.8
ATG11YPR049C COQ8P27697 501 aa3.8□□□□□ -1.8
ATG11YPR049C IPL1P38991 367 aa3.8□□□□□ -1.8
ATG11YPR049C UTP10P42945 1769 aaKnown RBP3.79□□□□□ -1.8
ATG11YPR049C VHR2P40041 505 aa3.78□□□□□ -1.8
ATG11YPR049C EAP1P36041 632 aaKnown RBP3.78□□□□□ -1.8
ATG11YPR049C NPL4P33755 580 aa3.77□□□□□ -1.81
ATG11YPR049C HGH1P48362 394 aaKnown RBP3.77□□□□□ -1.81
ATG11YPR049C RAD54P32863 898 aa3.77□□□□□ -1.81
ATG11YPR049C YLL066CQ99208 1374 aa3.76□□□□□ -1.81
ATG11YPR049C YOL036WQ08206 761 aa3.75□□□□□ -1.81
ATG11YPR049C RAM2P29703 316 aa3.75□□□□□ -1.81
ATG11YPR049C FIG2P25653 1609 aa3.75□□□□□ -1.81
ATG11YPR049C SSA1P10591 642 aaKnown RBP3.75□□□□□ -1.81
ATG11YPR049C VMA1P17255 1071 aaKnown RBP3.75□□□□□ -1.81
ATG11YPR049C MAK11P20484 414 aaKnown RBP3.74□□□□□ -1.81
ATG11YPR049C SAP30P38429 201 aa3.73□□□□□ -1.81
ATG11YPR049C TIF11P38912 153 aaKnown RBP3.73□□□□□ -1.81
ATG11YPR049C CKB1P43639 278 aa3.72□□□□□ -1.81
ATG11YPR049C BUD31P25337 157 aaPredicted RBP3.71□□□□□ -1.81
ATG11YPR049C STS1P38637 319 aa3.71□□□□□ -1.81
ATG11YPR049C RPL34BP40525 121 aaKnown RBP3.71□□□□□ -1.82
ATG11YPR049C PTC3P34221 468 aaKnown RBP3.71□□□□□ -1.82
ATG11YPR049C RTG1P32607 177 aa3.7□□□□□ -1.82
ATG11YPR049C REF2P42073 533 aaPredicted RBP3.7□□□□□ -1.82
ATG11YPR049C TAF7Q05021 590 aa3.7□□□□□ -1.82
ATG11YPR049C MAM3Q12296 706 aa3.7□□□□□ -1.82
ATG11YPR049C GUT1P32190 709 aa3.69□□□□□ -1.82
ATG11YPR049C LDB19Q12502 818 aa3.69□□□□□ -1.82
ATG11YPR049C VPS29P38759 282 aa3.69□□□□□ -1.82
ATG11YPR049C NCR1Q12200 1170 aa3.69□□□□□ -1.82
ATG11YPR049C POM152P39685 1337 aa3.68□□□□□ -1.82
ATG11YPR049C TYS1P36421 394 aaKnown RBP3.67□□□□□ -1.82
ATG11YPR049C IES2P40154 320 aa3.67□□□□□ -1.82
ATG11YPR049C GBP2P25555 427 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
ATG11YPR049C TBF1Q02457 562 aa3.67□□□□□ -1.82
ATG11YPR049C ROM2P51862 1356 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms