RNA–Protein interactions for RNA: YPL166W

ATG29, Transcript of Autophagy-specific protein, yeastyeast

Gene ATG29, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG29YPL166W TY1A-ER2P0CX66 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-GR3P0CX67 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-LR1P0CX68 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-MR2P0CX69 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-JR2P47099 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-DR1Q03856 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-ML1Q04706 440 aaKnown RBP9.42□□□□□ -0.9
ATG29YPL166W TY1A-BRQ12217 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-NL2Q12470 440 aa9.42□□□□□ -0.9
ATG29YPL166W TY1A-GR2Q12485 440 aa9.42□□□□□ -0.9
ATG29YPL166W SEC2P17065 759 aa9.41□□□□□ -0.9
ATG29YPL166W SPB4P25808 606 aaPredicted RBP9.39□□□□□ -0.91
ATG29YPL166W IES2P40154 320 aa9.39□□□□□ -0.91
ATG29YPL166W ERG12P07277 443 aa9.38□□□□□ -0.91
ATG29YPL166W SPT16P32558 1035 aaKnown RBP9.37□□□□□ -0.91
ATG29YPL166W KEX2P13134 814 aa9.34□□□□□ -0.91
ATG29YPL166W NUP42P49686 430 aaKnown RBP9.33□□□□□ -0.92
ATG29YPL166W ERF2Q06551 359 aa9.33□□□□□ -0.92
ATG29YPL166W TRK1P12685 1235 aa9.32□□□□□ -0.92
ATG29YPL166W CLB5P30283 435 aa9.32□□□□□ -0.92
ATG29YPL166W RRN7P40992 514 aa9.32□□□□□ -0.92
ATG29YPL166W CST6P40535 587 aa9.3□□□□□ -0.92
ATG29YPL166W PAT1P25644 796 aaKnown RBP9.29□□□□□ -0.92
ATG29YPL166W DIT2P21595 489 aa9.28□□□□□ -0.92
ATG29YPL166W TEA1P47988 759 aa9.25□□□□□ -0.93
ATG29YPL166W LAM6Q08001 693 aa9.25□□□□□ -0.93
ATG29YPL166W FRK1Q03002 865 aaPredicted RBP9.23□□□□□ -0.93
ATG29YPL166W BDP1P46678 594 aa9.21□□□□□ -0.94
ATG29YPL166W CLA4P48562 842 aa9.21□□□□□ -0.94
ATG29YPL166W AIR1P40507 360 aaKnown RBP9.2□□□□□ -0.94
ATG29YPL166W RTF1P53064 558 aa9.2□□□□□ -0.94
ATG29YPL166W YNL115CP53925 644 aa9.2□□□□□ -0.94
ATG29YPL166W SIT4P20604 311 aa9.19□□□□□ -0.94
ATG29YPL166W PAC1P39946 494 aaKnown RBP9.19□□□□□ -0.94
ATG29YPL166W NIS1P53939 407 aa9.19□□□□□ -0.94
ATG29YPL166W TUB4P53378 473 aa9.18□□□□□ -0.94
ATG29YPL166W AGE1Q04412 482 aa9.18□□□□□ -0.94
ATG29YPL166W MOD5P07884 428 aa9.12□□□□□ -0.95
ATG29YPL166W FPK1P53739 893 aa9.11□□□□□ -0.95
ATG29YPL166W HED1Q03937 162 aa9.1□□□□□ -0.95
ATG29YPL166W YMR196WQ04336 1088 aa9.1□□□□□ -0.95
ATG29YPL166W CDC4P07834 779 aa9.09□□□□□ -0.95
ATG29YPL166W SLY41P22215 453 aa9.08□□□□□ -0.96
ATG29YPL166W BRE2P43132 505 aa9.07□□□□□ -0.96
ATG29YPL166W ATF2P53296 535 aa9.07□□□□□ -0.96
ATG29YPL166W PUS5Q06244 254 aa9.06□□□□□ -0.96
ATG29YPL166W GCR2Q01722 534 aa9.05□□□□□ -0.96
ATG29YPL166W KXD1P53158 218 aa9.04□□□□□ -0.96
ATG29YPL166W SCJ1P25303 377 aa9.02□□□□□ -0.97
ATG29YPL166W YNR021WP53723 404 aaKnown RBP9.02□□□□□ -0.97
ATG29YPL166W GLC3P32775 704 aa9.01□□□□□ -0.97
ATG29YPL166W HST2P53686 357 aa9.01□□□□□ -0.97
ATG29YPL166W LEU3P08638 886 aa8.99□□□□□ -0.97
ATG29YPL166W HXT10P43581 546 aa8.99□□□□□ -0.97
ATG29YPL166W PDC1P06169 563 aaKnown RBP8.98□□□□□ -0.97
ATG29YPL166W PUS6P53294 404 aa8.98□□□□□ -0.97
ATG29YPL166W MET32Q12041 191 aa8.98□□□□□ -0.97
ATG29YPL166W TPD3P31383 635 aa8.97□□□□□ -0.97
ATG29YPL166W MMP1Q12372 583 aa8.97□□□□□ -0.97
ATG29YPL166W ASH1P34233 588 aa8.96□□□□□ -0.98
ATG29YPL166W RRD1P40454 393 aaKnown RBP8.95□□□□□ -0.98
ATG29YPL166W TBF1Q02457 562 aa8.95□□□□□ -0.98
ATG29YPL166W GLN1P32288 370 aaKnown RBP8.94□□□□□ -0.98
ATG29YPL166W RGA1P39083 1007 aa8.94□□□□□ -0.98
ATG29YPL166W YDL206WQ12424 762 aa8.94□□□□□ -0.98
ATG29YPL166W TRM1P15565 570 aaKnown RBP8.93□□□□□ -0.98
ATG29YPL166W RPA14P50106 137 aa8.93□□□□□ -0.98
ATG29YPL166W ALR1Q08269 859 aa8.93□□□□□ -0.98
ATG29YPL166W ESS1P22696 170 aa8.92□□□□□ -0.98
ATG29YPL166W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.92□□□□□ -0.98not detected
ATG29YPL166W HST3P53687 447 aa8.92□□□□□ -0.98
ATG29YPL166W AFT1P22149 690 aa8.91□□□□□ -0.98
ATG29YPL166W YPR097WQ06839 1073 aa8.91□□□□□ -0.98
ATG29YPL166W GAR1P28007 205 aaKnown RBP8.9□□□□□ -0.98
ATG29YPL166W SYH1Q02875 849 aaKnown RBP8.9□□□□□ -0.98
ATG29YPL166W TYW1Q08960 810 aaKnown RBP8.9□□□□□ -0.98
ATG29YPL166W AIM7Q12156 149 aa8.88□□□□□ -0.99
ATG29YPL166W YJU3P28321 313 aa8.86□□□□□ -0.99
ATG29YPL166W MET22P32179 357 aa8.86□□□□□ -0.99
ATG29YPL166W KIP2P28743 706 aa8.85□□□□□ -0.99
ATG29YPL166W GBP2P25555 427 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
ATG29YPL166W KTR1P27810 393 aaKnown RBP8.83□□□□□ -1
ATG29YPL166W YJR115WP47152 169 aa8.82□□□□□ -1
ATG29YPL166W ENV9Q08651 330 aa8.82□□□□□ -1
ATG29YPL166W IXR1P33417 597 aa8.81□□□□□ -1
ATG29YPL166W YPL062WQ02781 134 aa8.81□□□□□ -1
ATG29YPL166W PKH3Q03306 898 aaPredicted RBP8.81□□□□□ -1
ATG29YPL166W RPN1P38764 993 aaKnown RBP8.8□□□□□ -1
ATG29YPL166W RSC30P38781 883 aa8.8□□□□□ -1
ATG29YPL166W CSN12P47130 423 aa8.8□□□□□ -1
ATG29YPL166W YDR444WQ04093 687 aa8.79□□□□□ -1
ATG29YPL166W LEO1P38439 464 aa8.78□□□□□ -1
ATG29YPL166W MSB3P48566 633 aaPredicted RBP8.78□□□□□ -1
ATG29YPL166W ARG8P18544 423 aa8.76□□□□□ -1.01
ATG29YPL166W RGA2Q06407 1009 aa8.76□□□□□ -1.01
ATG29YPL166W UGA3P26370 528 aa8.75□□□□□ -1.01
ATG29YPL166W LCB5Q06147 687 aaKnown RBP8.74□□□□□ -1.01
ATG29YPL166W VAC17P25591 423 aa8.73□□□□□ -1.01
ATG29YPL166W MRT4P33201 236 aaKnown RBP8.73□□□□□ -1.01
ATG29YPL166W KIN1P13185 1064 aa8.69□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms