RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	TY1A-OR	P0CX59	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-PR2	P0CX60	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-DR5	P0CX65	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-ER2	P0CX66	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-GR3	P0CX67	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-LR1	P0CX68	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-MR2	P0CX69	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-JR2	P47099	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-DR1	Q03856	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-ML1	Q04706	440 aa	Known RBP	7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-BR	Q12217	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-NL2	Q12470	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	TY1A-GR2	Q12485	440 aa		7.08	□□□□□ -1.28
LEE1	YPL054W	SEC2	P17065	759 aa		7.07	□□□□□ -1.28
LEE1	YPL054W	SAS10	Q12136	610 aa	Predicted RBP	7.07	□□□□□ -1.28
LEE1	YPL054W	CLB5	P30283	435 aa		7.06	□□□□□ -1.28
LEE1	YPL054W	DSF2	P38213	736 aa		7.04	□□□□□ -1.28
LEE1	YPL054W	RRN7	P40992	514 aa		7.04	□□□□□ -1.28
LEE1	YPL054W	KEX2	P13134	814 aa		7.02	□□□□□ -1.29
LEE1	YPL054W	CST6	P40535	587 aa		7.02	□□□□□ -1.29
LEE1	YPL054W	LAM6	Q08001	693 aa		7.01	□□□□□ -1.29
LEE1	YPL054W	IES2	P40154	320 aa		7	□□□□□ -1.29
LEE1	YPL054W	FRK1	Q03002	865 aa	Predicted RBP	6.99	□□□□□ -1.29
LEE1	YPL054W	SPB4	P25808	606 aa	Predicted RBP	6.98	□□□□□ -1.29
LEE1	YPL054W	BDP1	P46678	594 aa		6.97	□□□□□ -1.29
LEE1	YPL054W	GCR2	Q01722	534 aa		6.97	□□□□□ -1.29
LEE1	YPL054W	ERF2	Q06551	359 aa		6.97	□□□□□ -1.29
LEE1	YPL054W	AIR1	P40507	360 aa	Known RBP	6.96	□□□□□ -1.3
LEE1	YPL054W	RTF1	P53064	558 aa		6.96	□□□□□ -1.3
LEE1	YPL054W	TEA1	P47988	759 aa		6.95	□□□□□ -1.3
LEE1	YPL054W	CDC4	P07834	779 aa		6.94	□□□□□ -1.3
LEE1	YPL054W	BRE2	P43132	505 aa		6.94	□□□□□ -1.3
LEE1	YPL054W	CLA4	P48562	842 aa		6.94	□□□□□ -1.3
LEE1	YPL054W	NUP42	P49686	430 aa	Known RBP	6.93	□□□□□ -1.3
LEE1	YPL054W	YNL115C	P53925	644 aa		6.93	□□□□□ -1.3
LEE1	YPL054W	HED1	Q03937	162 aa		6.93	□□□□□ -1.3
LEE1	YPL054W	PAC1	P39946	494 aa	Known RBP	6.91	□□□□□ -1.3
LEE1	YPL054W	TUB4	P53378	473 aa		6.91	□□□□□ -1.3
LEE1	YPL054W	SIT4	P20604	311 aa		6.9	□□□□□ -1.3
LEE1	YPL054W	AGE1	Q04412	482 aa		6.89	□□□□□ -1.31
LEE1	YPL054W	DIT2	P21595	489 aa		6.88	□□□□□ -1.31
LEE1	YPL054W	MOD5	P07884	428 aa		6.87	□□□□□ -1.31
LEE1	YPL054W	NIS1	P53939	407 aa		6.86	□□□□□ -1.31
LEE1	YPL054W	KXD1	P53158	218 aa		6.85	□□□□□ -1.31
LEE1	YPL054W	YMR196W	Q04336	1088 aa		6.84	□□□□□ -1.31
LEE1	YPL054W	SLY41	P22215	453 aa		6.81	□□□□□ -1.32
LEE1	YPL054W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	6.81	□□□□□ -1.32	not detected
LEE1	YPL054W	GAR1	P28007	205 aa	Known RBP	6.81	□□□□□ -1.32
LEE1	YPL054W	HST3	P53687	447 aa		6.81	□□□□□ -1.32
LEE1	YPL054W	FPK1	P53739	893 aa		6.81	□□□□□ -1.32
LEE1	YPL054W	YPL062W	Q02781	134 aa		6.81	□□□□□ -1.32
LEE1	YPL054W	PUS5	Q06244	254 aa		6.81	□□□□□ -1.32
LEE1	YPL054W	TPD3	P31383	635 aa		6.8	□□□□□ -1.32
LEE1	YPL054W	AFT1	P22149	690 aa		6.79	□□□□□ -1.32
LEE1	YPL054W	ASH1	P34233	588 aa		6.79	□□□□□ -1.32
LEE1	YPL054W	HXT10	P43581	546 aa		6.79	□□□□□ -1.32
LEE1	YPL054W	MET32	Q12041	191 aa		6.79	□□□□□ -1.32
LEE1	YPL054W	ATF2	P53296	535 aa		6.78	□□□□□ -1.32
LEE1	YPL054W	RRD1	P40454	393 aa	Known RBP	6.77	□□□□□ -1.33
LEE1	YPL054W	TBF1	Q02457	562 aa		6.77	□□□□□ -1.33
LEE1	YPL054W	MET22	P32179	357 aa		6.76	□□□□□ -1.33
LEE1	YPL054W	PUS6	P53294	404 aa		6.76	□□□□□ -1.33
LEE1	YPL054W	SYH1	Q02875	849 aa	Known RBP	6.76	□□□□□ -1.33
LEE1	YPL054W	PDC1	P06169	563 aa	Known RBP	6.75	□□□□□ -1.33
LEE1	YPL054W	HST2	P53686	357 aa		6.75	□□□□□ -1.33
LEE1	YPL054W	ALR1	Q08269	859 aa		6.75	□□□□□ -1.33
LEE1	YPL054W	ENV9	Q08651	330 aa		6.75	□□□□□ -1.33
LEE1	YPL054W	RPA14	P50106	137 aa		6.74	□□□□□ -1.33
LEE1	YPL054W	YNR021W	P53723	404 aa	Known RBP	6.73	□□□□□ -1.33
LEE1	YPL054W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	6.72	□□□□□ -1.33	not detected
LEE1	YPL054W	YDR444W	Q04093	687 aa		6.72	□□□□□ -1.33
LEE1	YPL054W	YPR097W	Q06839	1073 aa		6.72	□□□□□ -1.33
LEE1	YPL054W	MMP1	Q12372	583 aa		6.72	□□□□□ -1.33
LEE1	YPL054W	GLN1	P32288	370 aa	Known RBP	6.71	□□□□□ -1.34
LEE1	YPL054W	YDL206W	Q12424	762 aa		6.71	□□□□□ -1.34
LEE1	YPL054W	SCJ1	P25303	377 aa		6.7	□□□□□ -1.34
LEE1	YPL054W	KIP2	P28743	706 aa		6.7	□□□□□ -1.34
LEE1	YPL054W	RQC2	Q12532	1038 aa	Known RBP	6.7	□□□□□ -1.34
LEE1	YPL054W	TRM1	P15565	570 aa	Known RBP	6.69	□□□□□ -1.34
LEE1	YPL054W	YJR115W	P47152	169 aa		6.69	□□□□□ -1.34
LEE1	YPL054W	MSB3	P48566	633 aa	Predicted RBP	6.68	□□□□□ -1.34
LEE1	YPL054W	LCB5	Q06147	687 aa	Known RBP	6.68	□□□□□ -1.34
LEE1	YPL054W	GLC3	P32775	704 aa		6.67	□□□□□ -1.34
LEE1	YPL054W	UGA3	P26370	528 aa		6.66	□□□□□ -1.34
LEE1	YPL054W	IXR1	P33417	597 aa		6.66	□□□□□ -1.34
LEE1	YPL054W	ESS1	P22696	170 aa		6.65	□□□□□ -1.34
LEE1	YPL054W	RTT106	P40161	455 aa		6.64	□□□□□ -1.35
LEE1	YPL054W	AIM7	Q12156	149 aa		6.63	□□□□□ -1.35
LEE1	YPL054W	SRF1	Q12516	437 aa		6.63	□□□□□ -1.35
LEE1	YPL054W	MRT4	P33201	236 aa	Known RBP	6.61	□□□□□ -1.35
LEE1	YPL054W	PTK2	P47116	818 aa	Known RBP	6.6	□□□□□ -1.35
LEE1	YPL054W	YLR346C	Q06139	101 aa		6.6	□□□□□ -1.35
LEE1	YPL054W	TYW1	Q08960	810 aa	Known RBP	6.6	□□□□□ -1.35
LEE1	YPL054W	YJU3	P28321	313 aa		6.59	□□□□□ -1.35
LEE1	YPL054W	VAC17	P25591	423 aa		6.58	□□□□□ -1.36
LEE1	YPL054W	RSC30	P38781	883 aa		6.57	□□□□□ -1.36
LEE1	YPL054W	PKH3	Q03306	898 aa	Predicted RBP	6.57	□□□□□ -1.36
LEE1	YPL054W	CSN12	P47130	423 aa		6.56	□□□□□ -1.36
LEE1	YPL054W	YDL176W	Q12027	708 aa		6.56	□□□□□ -1.36
LEE1	YPL054W	ARG8	P18544	423 aa		6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms