RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W TY1A-GR3P0CX67 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-LR1P0CX68 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-MR2P0CX69 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-JR2P47099 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-DR1Q03856 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-ML1Q04706 440 aaKnown RBP7.68□□□□□ -1.18
HSH49YOR319W TY1A-BRQ12217 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-NL2Q12470 440 aa7.68□□□□□ -1.18
HSH49YOR319W TY1A-GR2Q12485 440 aa7.68□□□□□ -1.18
HSH49YOR319W SEC2P17065 759 aa7.67□□□□□ -1.18
HSH49YOR319W CST6P40535 587 aa7.67□□□□□ -1.18
HSH49YOR319W YPR109WQ06104 294 aa7.67□□□□□ -1.18
HSH49YOR319W RGR1P19263 1082 aa7.65□□□□□ -1.18
HSH49YOR319W AIR1P40507 360 aaKnown RBP7.64□□□□□ -1.19
HSH49YOR319W PAT1P25644 796 aaKnown RBP7.63□□□□□ -1.19
HSH49YOR319W RRN7P40992 514 aa7.63□□□□□ -1.19
HSH49YOR319W LAM6Q08001 693 aa7.63□□□□□ -1.19
HSH49YOR319W BRE2P43132 505 aa7.62□□□□□ -1.19
HSH49YOR319W CLA4P48562 842 aa7.62□□□□□ -1.19
HSH49YOR319W FRK1Q03002 865 aaPredicted RBP7.62□□□□□ -1.19
HSH49YOR319W PBS2P08018 668 aa7.61□□□□□ -1.19
HSH49YOR319W GCR2Q01722 534 aa7.6□□□□□ -1.19
HSH49YOR319W BDP1P46678 594 aa7.57□□□□□ -1.2
HSH49YOR319W KEX2P13134 814 aa7.56□□□□□ -1.2
HSH49YOR319W CDC4P07834 779 aa7.54□□□□□ -1.2
HSH49YOR319W SPB4P25808 606 aaPredicted RBP7.54□□□□□ -1.2
HSH49YOR319W PSE1P32337 1089 aaKnown RBP7.53□□□□□ -1.2
HSH49YOR319W ERF2Q06551 359 aa7.53□□□□□ -1.2
HSH49YOR319W DSF2P38213 736 aa7.52□□□□□ -1.21
HSH49YOR319W YPL062WQ02781 134 aa7.52□□□□□ -1.21
HSH49YOR319W MAM3Q12296 706 aa7.52□□□□□ -1.21
HSH49YOR319W GAR1P28007 205 aaKnown RBP7.51□□□□□ -1.21
HSH49YOR319W HED1Q03937 162 aa7.51□□□□□ -1.21
HSH49YOR319W GBP2P25555 427 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
HSH49YOR319W CLB5P30283 435 aa7.49□□□□□ -1.21
HSH49YOR319W PAC1P39946 494 aaKnown RBP7.47□□□□□ -1.21
HSH49YOR319W IES2P40154 320 aa7.45□□□□□ -1.22
HSH49YOR319W TUB4P53378 473 aa7.43□□□□□ -1.22
HSH49YOR319W MOD5P07884 428 aa7.42□□□□□ -1.22
HSH49YOR319W RTF1P53064 558 aa7.42□□□□□ -1.22
HSH49YOR319W AGE1Q04412 482 aa7.42□□□□□ -1.22
HSH49YOR319W MET22P32179 357 aa7.4□□□□□ -1.22
HSH49YOR319W YNL115CP53925 644 aa7.4□□□□□ -1.22
HSH49YOR319W ASH1P34233 588 aa7.39□□□□□ -1.23
HSH49YOR319W NUP42P49686 430 aaKnown RBP7.39□□□□□ -1.23
HSH49YOR319W PUS5Q06244 254 aa7.39□□□□□ -1.23
HSH49YOR319W ENV9Q08651 330 aa7.39□□□□□ -1.23
HSH49YOR319W TEA1P47988 759 aa7.38□□□□□ -1.23
HSH49YOR319W HST3P53687 447 aa7.38□□□□□ -1.23
HSH49YOR319W MET32Q12041 191 aa7.38□□□□□ -1.23
HSH49YOR319W AFT1P22149 690 aa7.36□□□□□ -1.23
HSH49YOR319W SIT4P20604 311 aa7.35□□□□□ -1.23
HSH49YOR319W DIT2P21595 489 aa7.35□□□□□ -1.23
HSH49YOR319W YDR444WQ04093 687 aa7.35□□□□□ -1.23
HSH49YOR319W TAF7Q05021 590 aa7.35□□□□□ -1.23
HSH49YOR319W KXD1P53158 218 aa7.34□□□□□ -1.23
HSH49YOR319W NIS1P53939 407 aa7.33□□□□□ -1.24
HSH49YOR319W LCB5Q06147 687 aaKnown RBP7.29□□□□□ -1.24
HSH49YOR319W TPD3P31383 635 aa7.28□□□□□ -1.24
HSH49YOR319W HXT10P43581 546 aa7.28□□□□□ -1.24
HSH49YOR319W SLY41P22215 453 aa7.27□□□□□ -1.25
HSH49YOR319W RRD1P40454 393 aaKnown RBP7.27□□□□□ -1.25
HSH49YOR319W YMR196WQ04336 1088 aa7.27□□□□□ -1.25
HSH49YOR319W YJR115WP47152 169 aa7.26□□□□□ -1.25
HSH49YOR319W YNR021WP53723 404 aaKnown RBP7.26□□□□□ -1.25
HSH49YOR319W FPK1P53739 893 aa7.26□□□□□ -1.25
HSH49YOR319W SYH1Q02875 849 aaKnown RBP7.26□□□□□ -1.25
HSH49YOR319W PDC1P06169 563 aaKnown RBP7.25□□□□□ -1.25
HSH49YOR319W ATF2P53296 535 aa7.25□□□□□ -1.25
HSH49YOR319W TBF1Q02457 562 aa7.23□□□□□ -1.25
HSH49YOR319W LEO1P38439 464 aa7.22□□□□□ -1.25
HSH49YOR319W MSB3P48566 633 aaPredicted RBP7.22□□□□□ -1.25
HSH49YOR319W GLC3P32775 704 aa7.21□□□□□ -1.26
HSH49YOR319W ALR1Q08269 859 aa7.21□□□□□ -1.26
HSH49YOR319W KIP2P28743 706 aa7.2□□□□□ -1.26
HSH49YOR319W PUS6P53294 404 aa7.2□□□□□ -1.26
HSH49YOR319W YDL176WQ12027 708 aa7.2□□□□□ -1.26
HSH49YOR319W UGA3P26370 528 aa7.19□□□□□ -1.26
HSH49YOR319W RPA14P50106 137 aa7.19□□□□□ -1.26
HSH49YOR319W YDL206WQ12424 762 aa7.19□□□□□ -1.26
HSH49YOR319W LEU3P08638 886 aa7.18□□□□□ -1.26
HSH49YOR319W YPR097WQ06839 1073 aa7.16□□□□□ -1.26
HSH49YOR319W SRF1Q12516 437 aa7.16□□□□□ -1.26
HSH49YOR319W SCJ1P25303 377 aa7.15□□□□□ -1.26
HSH49YOR319W IXR1P33417 597 aa7.15□□□□□ -1.26
HSH49YOR319W HST2P53686 357 aa7.15□□□□□ -1.26
HSH49YOR319W AIM7Q12156 149 aa7.15□□□□□ -1.26
HSH49YOR319W TRM1P15565 570 aaKnown RBP7.14□□□□□ -1.27
HSH49YOR319W PTK2P47116 818 aaKnown RBP7.14□□□□□ -1.27
HSH49YOR319W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
HSH49YOR319W MMP1Q12372 583 aa7.13□□□□□ -1.27
HSH49YOR319W YLR346CQ06139 101 aa7.12□□□□□ -1.27
HSH49YOR319W CAF120P53836 1060 aa7.11□□□□□ -1.27
HSH49YOR319W GLN1P32288 370 aaKnown RBP7.1□□□□□ -1.27
HSH49YOR319W MRT4P33201 236 aaKnown RBP7.1□□□□□ -1.27
HSH49YOR319W OPT2Q06593 877 aa7.1□□□□□ -1.27
HSH49YOR319W RTT106P40161 455 aa7.08□□□□□ -1.28
HSH49YOR319W TYW1Q08960 810 aaKnown RBP7.08□□□□□ -1.28
HSH49YOR319W ESS1P22696 170 aa7.07□□□□□ -1.28
HSH49YOR319W RPN1P38764 993 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms