RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W RTF1P53064 558 aa6.56□□□□□ -1.36
VPS17YOR132W FPK1P53739 893 aa6.56□□□□□ -1.36
VPS17YOR132W PRT1P06103 763 aaKnown RBP6.55□□□□□ -1.36
VPS17YOR132W KEX2P13134 814 aa6.55□□□□□ -1.36
VPS17YOR132W YNL115CP53925 644 aa6.55□□□□□ -1.36
VPS17YOR132W GYP1Q08484 637 aa6.55□□□□□ -1.36
VPS17YOR132W HST2P53686 357 aa6.54□□□□□ -1.36
VPS17YOR132W SAS4Q04003 481 aa6.54□□□□□ -1.36
VPS17YOR132W CSN12P47130 423 aa6.53□□□□□ -1.36
VPS17YOR132W GLN1P32288 370 aaKnown RBP6.52□□□□□ -1.37
VPS17YOR132W ERF2Q06551 359 aa6.52□□□□□ -1.37
VPS17YOR132W MMP1Q12372 583 aa6.52□□□□□ -1.37
VPS17YOR132W TY1A-DR4O74302 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-HP0C2I4 478 aaKnown RBP6.51□□□□□ -1.37
VPS17YOR132W TY1A-AP0CX57 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-PR1P0CX58 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-ORP0CX59 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-PR2P0CX60 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-DR5P0CX65 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-ER2P0CX66 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-GR3P0CX67 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-LR1P0CX68 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-MR2P0CX69 440 aa6.51□□□□□ -1.37
VPS17YOR132W SEC2P17065 759 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-JR2P47099 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-DR1Q03856 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-ML1Q04706 440 aaKnown RBP6.51□□□□□ -1.37
VPS17YOR132W TY1A-BRQ12217 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-NL2Q12470 440 aa6.51□□□□□ -1.37
VPS17YOR132W TY1A-GR2Q12485 440 aa6.51□□□□□ -1.37
VPS17YOR132W SLY41P22215 453 aa6.5□□□□□ -1.37
VPS17YOR132W GUA1P38625 525 aaKnown RBP6.49□□□□□ -1.37
VPS17YOR132W SSA2P10592 639 aaKnown RBP6.49□□□□□ -1.37
VPS17YOR132W SCJ1P25303 377 aa6.49□□□□□ -1.37
VPS17YOR132W TYW1Q08960 810 aaKnown RBP6.49□□□□□ -1.37
VPS17YOR132W PAT1P25644 796 aaKnown RBP6.48□□□□□ -1.37
VPS17YOR132W KTR1P27810 393 aaKnown RBP6.47□□□□□ -1.37
VPS17YOR132W MRF1P30775 413 aaPredicted RBP6.47□□□□□ -1.37
VPS17YOR132W SPT16P32558 1035 aaKnown RBP6.47□□□□□ -1.37
VPS17YOR132W ESS1P22696 170 aa6.45□□□□□ -1.38
VPS17YOR132W RRN7P40992 514 aa6.45□□□□□ -1.38
VPS17YOR132W TUB4P53378 473 aa6.45□□□□□ -1.38
VPS17YOR132W DPS1P04802 557 aaKnown RBP6.44□□□□□ -1.38
VPS17YOR132W HPC2Q01448 625 aa6.44□□□□□ -1.38
VPS17YOR132W PUS6P53294 404 aa6.43□□□□□ -1.38
VPS17YOR132W PKH3Q03306 898 aaPredicted RBP6.43□□□□□ -1.38
VPS17YOR132W AGE1Q04412 482 aa6.43□□□□□ -1.38
VPS17YOR132W YJU3P28321 313 aa6.42□□□□□ -1.38
VPS17YOR132W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
VPS17YOR132W ERG12P07277 443 aa6.42□□□□□ -1.38
VPS17YOR132W LAM6Q08001 693 aa6.42□□□□□ -1.38
VPS17YOR132W TBF1Q02457 562 aa6.41□□□□□ -1.38
VPS17YOR132W TRM1P15565 570 aaKnown RBP6.4□□□□□ -1.38
VPS17YOR132W PAC1P39946 494 aaKnown RBP6.4□□□□□ -1.38
VPS17YOR132W HGH1P48362 394 aaKnown RBP6.4□□□□□ -1.38
VPS17YOR132W ARG8P18544 423 aa6.39□□□□□ -1.39
VPS17YOR132W BRL1P38770 471 aa6.39□□□□□ -1.39
VPS17YOR132W YEL077CQ3E7X8 1277 aa6.39□□□□□ -1.39
VPS17YOR132W SDH2P21801 266 aa6.39□□□□□ -1.39
VPS17YOR132W RSC30P38781 883 aa6.38□□□□□ -1.39
VPS17YOR132W KXD1P53158 218 aa6.38□□□□□ -1.39
VPS17YOR132W RAD59Q12223 238 aa6.38□□□□□ -1.39
VPS17YOR132W TFB3Q03290 321 aa6.37□□□□□ -1.39
VPS17YOR132W YDL206WQ12424 762 aa6.36□□□□□ -1.39
VPS17YOR132W AMS1P22855 1083 aa6.36□□□□□ -1.39
VPS17YOR132W RPA14P50106 137 aa6.36□□□□□ -1.39
VPS17YOR132W RAS1P01119 309 aa6.35□□□□□ -1.39
VPS17YOR132W ALR1Q08269 859 aa6.35□□□□□ -1.39
VPS17YOR132W DMA2P53924 522 aa6.34□□□□□ -1.39
VPS17YOR132W YPR097WQ06839 1073 aa6.34□□□□□ -1.39
VPS17YOR132W MOD5P07884 428 aa6.33□□□□□ -1.4
VPS17YOR132W PDC1P06169 563 aaKnown RBP6.33□□□□□ -1.4
VPS17YOR132W HXT10P43581 546 aa6.33□□□□□ -1.4
VPS17YOR132W TPD3P31383 635 aa6.32□□□□□ -1.4
VPS17YOR132W CSE4P36012 229 aa6.31□□□□□ -1.4
VPS17YOR132W CST6P40535 587 aa6.31□□□□□ -1.4
VPS17YOR132W BDP1P46678 594 aa6.31□□□□□ -1.4
VPS17YOR132W PKC1P24583 1151 aa6.3□□□□□ -1.4
VPS17YOR132W YBL036CP38197 257 aa6.3□□□□□ -1.4
VPS17YOR132W FRK1Q03002 865 aaPredicted RBP6.3□□□□□ -1.4
VPS17YOR132W SRC1Q03707 834 aa6.3□□□□□ -1.4
VPS17YOR132W RRD1P40454 393 aaKnown RBP6.29□□□□□ -1.4
VPS17YOR132W MAK16P10962 306 aaPredicted RBP6.28□□□□□ -1.4
VPS17YOR132W PUS5Q06244 254 aa6.25□□□□□ -1.41
VPS17YOR132W SPT5P27692 1063 aaKnown RBP6.24□□□□□ -1.41
VPS17YOR132W YJL007CP47080 104 aa6.24□□□□□ -1.41
VPS17YOR132W NAF1P53919 492 aaKnown RBP6.23□□□□□ -1.41
VPS17YOR132W HED1Q03937 162 aa6.23□□□□□ -1.41
VPS17YOR132W SYH1Q02875 849 aaKnown RBP6.23□□□□□ -1.41
VPS17YOR132W VAC17P25591 423 aa6.22□□□□□ -1.41
VPS17YOR132W KIP2P28743 706 aa6.22□□□□□ -1.41
VPS17YOR132W FIG4P42837 879 aa6.21□□□□□ -1.42
VPS17YOR132W TEC1P18412 486 aa6.2□□□□□ -1.42
VPS17YOR132W BIO2P32451 375 aa6.2□□□□□ -1.42
VPS17YOR132W IXR1P33417 597 aa6.2□□□□□ -1.42
VPS17YOR132W BIM1P40013 344 aa6.2□□□□□ -1.42
VPS17YOR132W CLA4P48562 842 aa6.2□□□□□ -1.42
VPS17YOR132W YDJ1P25491 409 aaKnown RBP6.18□□□□□ -1.42
VPS17YOR132W YNL108CP53929 270 aa6.18□□□□□ -1.42
VPS17YOR132W CDC4P07834 779 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms