RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C TY1A-DR4O74302 440 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-HP0C2I4 478 aaKnown RBP5.8□□□□□ -1.48
HRD1YOL013C TY1A-AP0CX57 440 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-PR1P0CX58 440 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-ORP0CX59 440 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-PR2P0CX60 440 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-DR5P0CX65 440 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-ER2P0CX66 440 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-GR3P0CX67 440 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-LR1P0CX68 440 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-MR2P0CX69 440 aa5.8□□□□□ -1.48
HRD1YOL013C KEX2P13134 814 aa5.8□□□□□ -1.48
HRD1YOL013C SEC2P17065 759 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-JR2P47099 440 aa5.8□□□□□ -1.48
HRD1YOL013C RTF1P53064 558 aa5.8□□□□□ -1.48
HRD1YOL013C NIS1P53939 407 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-DR1Q03856 440 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-ML1Q04706 440 aaKnown RBP5.8□□□□□ -1.48
HRD1YOL013C AIM7Q12156 149 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-BRQ12217 440 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-NL2Q12470 440 aa5.8□□□□□ -1.48
HRD1YOL013C TY1A-GR2Q12485 440 aa5.8□□□□□ -1.48
HRD1YOL013C SIT4P20604 311 aa5.79□□□□□ -1.48
HRD1YOL013C PAT1P25644 796 aaKnown RBP5.79□□□□□ -1.48
HRD1YOL013C SPT16P32558 1035 aaKnown RBP5.79□□□□□ -1.48
HRD1YOL013C YNL115CP53925 644 aa5.79□□□□□ -1.48
HRD1YOL013C YMR196WQ04336 1088 aa5.79□□□□□ -1.48
HRD1YOL013C YEL077CQ3E7X8 1277 aa5.78□□□□□ -1.48
HRD1YOL013C ERG12P07277 443 aa5.77□□□□□ -1.49
HRD1YOL013C FPK1P53739 893 aa5.77□□□□□ -1.49
HRD1YOL013C ERF2Q06551 359 aa5.77□□□□□ -1.49
HRD1YOL013C AMS1P22855 1083 aa5.76□□□□□ -1.49
HRD1YOL013C RRN7P40992 514 aa5.76□□□□□ -1.49
HRD1YOL013C SDH2P21801 266 aa5.75□□□□□ -1.49
HRD1YOL013C RPN1P38764 993 aaKnown RBP5.75□□□□□ -1.49
HRD1YOL013C RAS1P01119 309 aa5.74□□□□□ -1.49
HRD1YOL013C HST2P53686 357 aa5.73□□□□□ -1.49
HRD1YOL013C SLY41P22215 453 aa5.72□□□□□ -1.49
HRD1YOL013C TUB4P53378 473 aa5.72□□□□□ -1.49
HRD1YOL013C GLN1P32288 370 aaKnown RBP5.71□□□□□ -1.5
HRD1YOL013C MMP1Q12372 583 aa5.71□□□□□ -1.5
HRD1YOL013C AGE1Q04412 482 aa5.7□□□□□ -1.5
HRD1YOL013C KIN1P13185 1064 aa5.69□□□□□ -1.5
HRD1YOL013C PAC1P39946 494 aaKnown RBP5.69□□□□□ -1.5
HRD1YOL013C SCJ1P25303 377 aa5.69□□□□□ -1.5
HRD1YOL013C CSN12P47130 423 aa5.68□□□□□ -1.5
HRD1YOL013C PUS6P53294 404 aa5.68□□□□□ -1.5
HRD1YOL013C CST6P40535 587 aa5.67□□□□□ -1.5
HRD1YOL013C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
HRD1YOL013C KXD1P53158 218 aa5.66□□□□□ -1.5
HRD1YOL013C TBF1Q02457 562 aa5.66□□□□□ -1.5
HRD1YOL013C LAM6Q08001 693 aa5.66□□□□□ -1.5
HRD1YOL013C TYW1Q08960 810 aaKnown RBP5.66□□□□□ -1.5
HRD1YOL013C ESS1P22696 170 aa5.66□□□□□ -1.5
HRD1YOL013C BDP1P46678 594 aa5.66□□□□□ -1.5
HRD1YOL013C FRK1Q03002 865 aaPredicted RBP5.66□□□□□ -1.5
HRD1YOL013C MOD5P07884 428 aa5.65□□□□□ -1.51
HRD1YOL013C SSA2P10592 639 aaKnown RBP5.63□□□□□ -1.51
HRD1YOL013C TRM1P15565 570 aaKnown RBP5.63□□□□□ -1.51
HRD1YOL013C KTR1P27810 393 aaKnown RBP5.63□□□□□ -1.51
HRD1YOL013C SRC1Q03707 834 aa5.63□□□□□ -1.51
HRD1YOL013C ALR1Q08269 859 aa5.63□□□□□ -1.51
HRD1YOL013C TRK1P12685 1235 aa5.62□□□□□ -1.51
HRD1YOL013C YJU3P28321 313 aa5.62□□□□□ -1.51
HRD1YOL013C TPD3P31383 635 aa5.62□□□□□ -1.51
HRD1YOL013C HXT10P43581 546 aa5.62□□□□□ -1.51
HRD1YOL013C RPA14P50106 137 aa5.62□□□□□ -1.51
HRD1YOL013C PKH3Q03306 898 aaPredicted RBP5.62□□□□□ -1.51
HRD1YOL013C YDL206WQ12424 762 aa5.62□□□□□ -1.51
HRD1YOL013C YPR097WQ06839 1073 aa5.61□□□□□ -1.51
HRD1YOL013C PDC1P06169 563 aaKnown RBP5.6□□□□□ -1.51
HRD1YOL013C HED1Q03937 162 aa5.6□□□□□ -1.51
HRD1YOL013C ARG8P18544 423 aa5.59□□□□□ -1.51
HRD1YOL013C GUA1P38625 525 aaKnown RBP5.59□□□□□ -1.52
HRD1YOL013C RSC30P38781 883 aa5.59□□□□□ -1.52
HRD1YOL013C RRD1P40454 393 aaKnown RBP5.58□□□□□ -1.52
HRD1YOL013C PUS5Q06244 254 aa5.58□□□□□ -1.52
HRD1YOL013C CLA4P48562 842 aa5.57□□□□□ -1.52
HRD1YOL013C CDC4P07834 779 aa5.56□□□□□ -1.52
HRD1YOL013C AIR1P40507 360 aaKnown RBP5.56□□□□□ -1.52
HRD1YOL013C RAD59Q12223 238 aa5.56□□□□□ -1.52
HRD1YOL013C HPC2Q01448 625 aa5.56□□□□□ -1.52
HRD1YOL013C SYH1Q02875 849 aaKnown RBP5.55□□□□□ -1.52
HRD1YOL013C KIP2P28743 706 aa5.53□□□□□ -1.52
HRD1YOL013C BRL1P38770 471 aa5.52□□□□□ -1.53
HRD1YOL013C IXR1P33417 597 aa5.51□□□□□ -1.53
HRD1YOL013C GCR2Q01722 534 aa5.51□□□□□ -1.53
HRD1YOL013C VAC17P25591 423 aa5.5□□□□□ -1.53
HRD1YOL013C HST3P53687 447 aa5.5□□□□□ -1.53
HRD1YOL013C DMA2P53924 522 aa5.5□□□□□ -1.53
HRD1YOL013C MET32Q12041 191 aa5.5□□□□□ -1.53
HRD1YOL013C ASH1P34233 588 aa5.49□□□□□ -1.53
HRD1YOL013C CSE4P36012 229 aa5.49□□□□□ -1.53
HRD1YOL013C BRE2P43132 505 aa5.49□□□□□ -1.53
HRD1YOL013C AFT1P22149 690 aa5.48□□□□□ -1.53
HRD1YOL013C TFB3Q03290 321 aa5.48□□□□□ -1.53
HRD1YOL013C MAK16P10962 306 aaPredicted RBP5.47□□□□□ -1.53
HRD1YOL013C YBL036CP38197 257 aa5.47□□□□□ -1.53
HRD1YOL013C HGH1P48362 394 aaKnown RBP5.47□□□□□ -1.53
HRD1YOL013C FIG4P42837 879 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms