RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W LDB19Q12502 818 aa6.1□□□□□ -1.43
TRM112YNR046W SSA4P22202 642 aaKnown RBP6.09□□□□□ -1.43
TRM112YNR046W YJU3P28321 313 aa6.09□□□□□ -1.43
TRM112YNR046W NMA111P53920 997 aa6.09□□□□□ -1.43
TRM112YNR046W LAM6Q08001 693 aa6.09□□□□□ -1.43
TRM112YNR046W SUB2Q07478 446 aaKnown RBP6.08□□□□□ -1.44
TRM112YNR046W SSA1P10591 642 aaKnown RBP6.07□□□□□ -1.44
TRM112YNR046W SIS1P25294 352 aaKnown RBP6.07□□□□□ -1.44
TRM112YNR046W RTG2P32608 588 aaKnown RBP6.07□□□□□ -1.44
TRM112YNR046W NCR1Q12200 1170 aa6.07□□□□□ -1.44
TRM112YNR046W SPT5P27692 1063 aaKnown RBP6.06□□□□□ -1.44
TRM112YNR046W BIO2P32451 375 aa6.06□□□□□ -1.44
TRM112YNR046W NPL4P33755 580 aa6.06□□□□□ -1.44
TRM112YNR046W YNL108CP53929 270 aa6.06□□□□□ -1.44
TRM112YNR046W YDL129WQ07555 291 aa6.06□□□□□ -1.44
TRM112YNR046W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
TRM112YNR046W YPR204WQ08995 1032 aa6.05□□□□□ -1.44
TRM112YNR046W ERG12P07277 443 aa6.04□□□□□ -1.44
TRM112YNR046W NUD1P32336 851 aa6.04□□□□□ -1.44
TRM112YNR046W RSC30P38781 883 aa6.04□□□□□ -1.44
TRM112YNR046W PUS6P53294 404 aa6.04□□□□□ -1.44
TRM112YNR046W MAK16P10962 306 aaPredicted RBP6.03□□□□□ -1.44
TRM112YNR046W SUP45P12385 437 aaKnown RBP6.03□□□□□ -1.44
TRM112YNR046W GEF1P37020 779 aa6.03□□□□□ -1.44
TRM112YNR046W TTI1P36097 1038 aa6.02□□□□□ -1.45
TRM112YNR046W HAP5Q02516 242 aa6.02□□□□□ -1.45
TRM112YNR046W KEX2P13134 814 aa6.01□□□□□ -1.45
TRM112YNR046W TRM1P15565 570 aaKnown RBP6.01□□□□□ -1.45
TRM112YNR046W SIS2P36024 562 aa6.01□□□□□ -1.45
TRM112YNR046W TBF1Q02457 562 aa6.01□□□□□ -1.45
TRM112YNR046W CPS1P27614 576 aa6□□□□□ -1.45
TRM112YNR046W YPP1P46951 817 aa6□□□□□ -1.45
TRM112YNR046W YDJ1P25491 409 aaKnown RBP5.99□□□□□ -1.45
TRM112YNR046W ARH1P48360 493 aa5.99□□□□□ -1.45
TRM112YNR046W NAF1P53919 492 aaKnown RBP5.99□□□□□ -1.45
TRM112YNR046W ENO2P00925 437 aaKnown RBP5.98□□□□□ -1.45
TRM112YNR046W PDR1P12383 1068 aa5.98□□□□□ -1.45
TRM112YNR046W GCD11P32481 527 aaKnown RBP5.98□□□□□ -1.45
TRM112YNR046W ERF2Q06551 359 aa5.98□□□□□ -1.45
TRM112YNR046W SAP30P38429 201 aa5.97□□□□□ -1.45
TRM112YNR046W SLX8P40072 274 aa5.97□□□□□ -1.45
TRM112YNR046W RPL34AP87262 121 aaPredicted RBP5.97□□□□□ -1.45
TRM112YNR046W ISM1P48526 1002 aa5.96□□□□□ -1.46
TRM112YNR046W ELP4Q02884 456 aaKnown RBP5.96□□□□□ -1.46
TRM112YNR046W ENO1P00924 437 aaKnown RBP5.95□□□□□ -1.46
TRM112YNR046W STR2P47164 639 aa5.95□□□□□ -1.46
TRM112YNR046W RIM21P48565 533 aa5.95□□□□□ -1.46
TRM112YNR046W BNI4P53858 892 aa5.95□□□□□ -1.46
TRM112YNR046W MRX10Q05648 414 aa5.95□□□□□ -1.46
TRM112YNR046W RAM1P22007 431 aa5.94□□□□□ -1.46
TRM112YNR046W SPT23P35210 1082 aa5.93□□□□□ -1.46
TRM112YNR046W FKH1P40466 484 aa5.93□□□□□ -1.46
TRM112YNR046W RPA14P50106 137 aa5.93□□□□□ -1.46
TRM112YNR046W TUB4P53378 473 aa5.93□□□□□ -1.46
TRM112YNR046W YML020WQ03722 664 aa5.93□□□□□ -1.46
TRM112YNR046W YDL206WQ12424 762 aa5.93□□□□□ -1.46
TRM112YNR046W PAT1P25644 796 aaKnown RBP5.92□□□□□ -1.46
TRM112YNR046W PTC2P39966 464 aaKnown RBP5.92□□□□□ -1.46
TRM112YNR046W NOB1Q08444 459 aaKnown RBP5.92□□□□□ -1.46
TRM112YNR046W BUD20Q08004 166 aaPredicted RBP5.91□□□□□ -1.46
TRM112YNR046W ALR1Q08269 859 aa5.91□□□□□ -1.46
TRM112YNR046W ENV9Q08651 330 aa5.91□□□□□ -1.46
TRM112YNR046W MCM16Q12262 181 aa5.91□□□□□ -1.46
TRM112YNR046W PRT1P06103 763 aaKnown RBP5.9□□□□□ -1.46
TRM112YNR046W CDC3P32457 520 aaKnown RBP5.9□□□□□ -1.46
TRM112YNR046W AGE1Q04412 482 aa5.9□□□□□ -1.46
TRM112YNR046W YPR097WQ06839 1073 aa5.9□□□□□ -1.46
TRM112YNR046W SEC2P17065 759 aa5.89□□□□□ -1.47
TRM112YNR046W PUP1P25043 261 aa5.89□□□□□ -1.47
TRM112YNR046W TGL4P36165 910 aa5.89□□□□□ -1.47
TRM112YNR046W MRX12P47084 519 aa5.89□□□□□ -1.47
TRM112YNR046W KXD1P53158 218 aa5.89□□□□□ -1.47
TRM112YNR046W TY1A-DR4O74302 440 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-HP0C2I4 478 aaKnown RBP5.88□□□□□ -1.47
TRM112YNR046W TY1A-AP0CX57 440 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-PR1P0CX58 440 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-ORP0CX59 440 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-PR2P0CX60 440 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-DR5P0CX65 440 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-ER2P0CX66 440 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-GR3P0CX67 440 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-LR1P0CX68 440 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-MR2P0CX69 440 aa5.88□□□□□ -1.47
TRM112YNR046W TEC1P18412 486 aa5.88□□□□□ -1.47
TRM112YNR046W GUT2P32191 649 aa5.88□□□□□ -1.47
TRM112YNR046W ATG3P40344 310 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-JR2P47099 440 aa5.88□□□□□ -1.47
TRM112YNR046W STE20Q03497 939 aaKnown RBP5.88□□□□□ -1.47
TRM112YNR046W TY1A-DR1Q03856 440 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-ML1Q04706 440 aaKnown RBP5.88□□□□□ -1.47
TRM112YNR046W NOP8Q08287 484 aaPredicted RBP5.88□□□□□ -1.47
TRM112YNR046W TY1A-BRQ12217 440 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-NL2Q12470 440 aa5.88□□□□□ -1.47
TRM112YNR046W TY1A-GR2Q12485 440 aa5.88□□□□□ -1.47
TRM112YNR046W PEP12P32854 288 aa5.87□□□□□ -1.47
TRM112YNR046W SLD2P34252 453 aa5.87□□□□□ -1.47
TRM112YNR046W EMP47P43555 445 aa5.87□□□□□ -1.47
TRM112YNR046W YML082WQ04533 649 aaKnown RBP5.87□□□□□ -1.47
TRM112YNR046W AIR2Q12476 344 aaKnown RBP5.87□□□□□ -1.47
TRM112YNR046W RRN7P40992 514 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms