RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W YAP3P38749 330 aa3.72□□□□□ -1.81
UBP15YMR304W NUP157P40064 1391 aaKnown RBP3.72□□□□□ -1.81
UBP15YMR304W YBT1P32386 1661 aa3.72□□□□□ -1.81
UBP15YMR304W YTA7P40340 1379 aa3.72□□□□□ -1.81
UBP15YMR304W YAP5P40574 245 aa3.71□□□□□ -1.82
UBP15YMR304W PSD2P53037 1138 aaKnown RBP3.71□□□□□ -1.82
UBP15YMR304W CAT8P39113 1433 aa3.7□□□□□ -1.82
UBP15YMR304W PIB1Q06651 286 aa3.69□□□□□ -1.82
UBP15YMR304W YBL029C-AQ3E756 94 aa3.69□□□□□ -1.82
UBP15YMR304W WSC3Q12215 556 aa3.68□□□□□ -1.82
UBP15YMR304W CST9Q06032 482 aa3.67□□□□□ -1.82
UBP15YMR304W MGA2P40578 1113 aa3.67□□□□□ -1.82
UBP15YMR304W SEC7P11075 2009 aaKnown RBP3.67□□□□□ -1.82
UBP15YMR304W CFT1Q06632 1357 aaKnown RBP3.66□□□□□ -1.82
UBP15YMR304W NSR1P27476 414 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
UBP15YMR304W RRD1P40454 393 aaKnown RBP3.66□□□□□ -1.82
UBP15YMR304W RQC2Q12532 1038 aaKnown RBP3.66□□□□□ -1.82
UBP15YMR304W MST1P07236 462 aa3.65□□□□□ -1.82
UBP15YMR304W SIS2P36024 562 aa3.65□□□□□ -1.83
UBP15YMR304W ENV9Q08651 330 aa3.63□□□□□ -1.83
UBP15YMR304W UBP1P25037 809 aa3.63□□□□□ -1.83
UBP15YMR304W SPP1Q03012 353 aa3.63□□□□□ -1.83
UBP15YMR304W EBP2P36049 427 aaKnown RBP3.62□□□□□ -1.83
UBP15YMR304W RTG3P38165 486 aa3.62□□□□□ -1.83
UBP15YMR304W VNX1P42839 908 aa3.62□□□□□ -1.83
UBP15YMR304W DBP1P24784 617 aaKnown RBP3.6□□□□□ -1.83
UBP15YMR304W YMR1P47147 688 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
UBP15YMR304W RPS9BP05755 195 aaKnown RBP3.59□□□□□ -1.84
UBP15YMR304W RCR1P38212 213 aa3.58□□□□□ -1.84
UBP15YMR304W PDR5P33302 1511 aaKnown RBP3.58□□□□□ -1.84
UBP15YMR304W VPS29P38759 282 aa3.57□□□□□ -1.84
UBP15YMR304W PDR11P40550 1411 aa3.57□□□□□ -1.84
UBP15YMR304W TIF11P38912 153 aaKnown RBP3.57□□□□□ -1.84
UBP15YMR304W SET4P42948 560 aa3.56□□□□□ -1.84
UBP15YMR304W UGA2P38067 497 aa3.56□□□□□ -1.84
UBP15YMR304W GEA1P47102 1408 aaPredicted RBP3.55□□□□□ -1.84
UBP15YMR304W STS1P38637 319 aa3.55□□□□□ -1.84
UBP15YMR304W ULI1P43604 169 aa3.55□□□□□ -1.84
UBP15YMR304W POM152P39685 1337 aa3.54□□□□□ -1.84
UBP15YMR304W VMA1P17255 1071 aaKnown RBP3.53□□□□□ -1.84
UBP15YMR304W YJL171CP46992 396 aa3.53□□□□□ -1.84
UBP15YMR304W YLL066CQ99208 1374 aa3.53□□□□□ -1.84
UBP15YMR304W THI12P42883 340 aa3.53□□□□□ -1.84
UBP15YMR304W THI5P43534 340 aa3.53□□□□□ -1.84
UBP15YMR304W THI11P47183 340 aa3.53□□□□□ -1.84
UBP15YMR304W THI13Q07748 340 aa3.53□□□□□ -1.84
UBP15YMR304W YOL036WQ08206 761 aa3.53□□□□□ -1.84
UBP15YMR304W LDB19Q12502 818 aa3.53□□□□□ -1.84
UBP15YMR304W SPT7P35177 1332 aa3.53□□□□□ -1.85
UBP15YMR304W NOP2P40991 618 aaKnown RBP3.52□□□□□ -1.85
UBP15YMR304W RTT106P40161 455 aa3.52□□□□□ -1.85
UBP15YMR304W MSB4Q12317 492 aa3.52□□□□□ -1.85
UBP15YMR304W RRP5Q05022 1729 aaKnown RBP3.52□□□□□ -1.85
UBP15YMR304W PEX21P50091 288 aa3.51□□□□□ -1.85
UBP15YMR304W RSF2P46974 1380 aa3.51□□□□□ -1.85
UBP15YMR304W EAP1P36041 632 aaKnown RBP3.51□□□□□ -1.85
UBP15YMR304W GCN2P15442 1659 aa3.5□□□□□ -1.85
UBP15YMR304W TRP5P00931 707 aaKnown RBP3.49□□□□□ -1.85
UBP15YMR304W GYP5Q12344 894 aa3.49□□□□□ -1.85
UBP15YMR304W FKH1P40466 484 aa3.48□□□□□ -1.85
UBP15YMR304W ALD2P47771 506 aa3.48□□□□□ -1.85
UBP15YMR304W SRB8P25648 1427 aa3.48□□□□□ -1.85
UBP15YMR304W YEF3P16521 1044 aaKnown RBP3.48□□□□□ -1.85
UBP15YMR304W DCW1P36091 449 aa3.48□□□□□ -1.85
UBP15YMR304W IOC2Q12072 812 aa3.47□□□□□ -1.85
UBP15YMR304W AIR2Q12476 344 aaKnown RBP3.47□□□□□ -1.85
UBP15YMR304W RTG1P32607 177 aa3.47□□□□□ -1.85
UBP15YMR304W RAM2P29703 316 aa3.47□□□□□ -1.85
UBP15YMR304W SAM3Q08986 587 aa3.46□□□□□ -1.86
UBP15YMR304W TFG1P41895 735 aaPredicted RBP3.46□□□□□ -1.86
UBP15YMR304W IMH1Q06704 911 aaKnown RBP3.45□□□□□ -1.86
UBP15YMR304W BMT6Q12291 365 aa3.45□□□□□ -1.86
UBP15YMR304W ROM2P51862 1356 aaKnown RBP3.45□□□□□ -1.86
UBP15YMR304W SNF2P22082 1703 aa3.45□□□□□ -1.86
UBP15YMR304W YSP2Q06681 1438 aa3.45□□□□□ -1.86
UBP15YMR304W HTA1P04911 132 aaKnown RBP3.45□□□□□ -1.86
UBP15YMR304W HTA2P04912 132 aa3.45□□□□□ -1.86
UBP15YMR304W MAK11P20484 414 aaKnown RBP3.45□□□□□ -1.86
UBP15YMR304W YNL035CP53962 389 aaKnown RBP3.45□□□□□ -1.86
UBP15YMR304W NCR1Q12200 1170 aa3.45□□□□□ -1.86
UBP15YMR304W PUS5Q06244 254 aa3.44□□□□□ -1.86
UBP15YMR304W GRE2Q12068 342 aaKnown RBP3.44□□□□□ -1.86
UBP15YMR304W ATH1P48016 1211 aa3.44□□□□□ -1.86
UBP15YMR304W YLR419WQ06698 1435 aaKnown RBP3.44□□□□□ -1.86
UBP15YMR304W COQ8P27697 501 aa3.42□□□□□ -1.86
UBP15YMR304W SRF1Q12516 437 aa3.42□□□□□ -1.86
UBP15YMR304W MAC1P35192 417 aa3.42□□□□□ -1.86
UBP15YMR304W YEL023CP39992 682 aa3.42□□□□□ -1.86
UBP15YMR304W UTP10P42945 1769 aaKnown RBP3.41□□□□□ -1.86
UBP15YMR304W YBL086CP38177 466 aa3.41□□□□□ -1.86
UBP15YMR304W SEC61P32915 480 aa3.41□□□□□ -1.86
UBP15YMR304W PTC3P34221 468 aaKnown RBP3.41□□□□□ -1.86
UBP15YMR304W EDS1P38073 919 aa3.41□□□□□ -1.86
UBP15YMR304W SAP30P38429 201 aa3.41□□□□□ -1.86
UBP15YMR304W IPL1P38991 367 aa3.41□□□□□ -1.86
UBP15YMR304W JIP4Q03361 876 aa3.41□□□□□ -1.86
UBP15YMR304W RLF2Q12495 606 aa3.4□□□□□ -1.86
UBP15YMR304W SSA2P10592 639 aaKnown RBP3.4□□□□□ -1.87
UBP15YMR304W IOC4Q04213 475 aa3.4□□□□□ -1.87
UBP15YMR304W DUS1P53759 423 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms