RNA–Protein interactions for RNA: YMR274C

RCE1, Transcript of Type II CAAX prenyl protease, yeastyeast

Gene RCE1, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCE1YMR274C TY1A-ER2P0CX66 440 aa9.64□□□□□ -0.87
RCE1YMR274C TY1A-GR3P0CX67 440 aa9.64□□□□□ -0.87
RCE1YMR274C TY1A-LR1P0CX68 440 aa9.64□□□□□ -0.87
RCE1YMR274C TY1A-MR2P0CX69 440 aa9.64□□□□□ -0.87
RCE1YMR274C SEC2P17065 759 aa9.64□□□□□ -0.87
RCE1YMR274C TY1A-JR2P47099 440 aa9.64□□□□□ -0.87
RCE1YMR274C TY1A-DR1Q03856 440 aa9.64□□□□□ -0.87
RCE1YMR274C TY1A-ML1Q04706 440 aaKnown RBP9.64□□□□□ -0.87
RCE1YMR274C TY1A-BRQ12217 440 aa9.64□□□□□ -0.87
RCE1YMR274C TY1A-NL2Q12470 440 aa9.64□□□□□ -0.87
RCE1YMR274C TY1A-GR2Q12485 440 aa9.64□□□□□ -0.87
RCE1YMR274C YEL077CQ3E7X8 1277 aa9.64□□□□□ -0.87
RCE1YMR274C NUP42P49686 430 aaKnown RBP9.62□□□□□ -0.87
RCE1YMR274C SPT16P32558 1035 aaKnown RBP9.61□□□□□ -0.87
RCE1YMR274C ERG12P07277 443 aa9.6□□□□□ -0.87
RCE1YMR274C KEX2P13134 814 aa9.59□□□□□ -0.87
RCE1YMR274C DIT2P21595 489 aa9.59□□□□□ -0.87
RCE1YMR274C CLB5P30283 435 aa9.59□□□□□ -0.87
RCE1YMR274C RQC2Q12532 1038 aaKnown RBP9.58□□□□□ -0.88
RCE1YMR274C ERF2Q06551 359 aa9.57□□□□□ -0.88
RCE1YMR274C RRN7P40992 514 aa9.55□□□□□ -0.88
RCE1YMR274C TEA1P47988 759 aa9.55□□□□□ -0.88
RCE1YMR274C PAT1P25644 796 aaKnown RBP9.54□□□□□ -0.88
RCE1YMR274C CST6P40535 587 aa9.5□□□□□ -0.89
RCE1YMR274C TRK1P12685 1235 aa9.49□□□□□ -0.89
RCE1YMR274C YNL115CP53925 644 aa9.46□□□□□ -0.9
RCE1YMR274C NIS1P53939 407 aa9.46□□□□□ -0.9
RCE1YMR274C SIT4P20604 311 aa9.45□□□□□ -0.9
RCE1YMR274C RTF1P53064 558 aa9.45□□□□□ -0.9
RCE1YMR274C FRK1Q03002 865 aaPredicted RBP9.45□□□□□ -0.9
RCE1YMR274C LAM6Q08001 693 aa9.44□□□□□ -0.9
RCE1YMR274C TUB4P53378 473 aa9.43□□□□□ -0.9
RCE1YMR274C BDP1P46678 594 aa9.42□□□□□ -0.9
RCE1YMR274C PAC1P39946 494 aaKnown RBP9.41□□□□□ -0.9
RCE1YMR274C CLA4P48562 842 aa9.4□□□□□ -0.9
RCE1YMR274C ATF2P53296 535 aa9.4□□□□□ -0.9
RCE1YMR274C AGE1Q04412 482 aa9.4□□□□□ -0.9
RCE1YMR274C FPK1P53739 893 aa9.39□□□□□ -0.91
RCE1YMR274C AIR1P40507 360 aaKnown RBP9.38□□□□□ -0.91
RCE1YMR274C YMR196WQ04336 1088 aa9.38□□□□□ -0.91
RCE1YMR274C SLY41P22215 453 aa9.35□□□□□ -0.91
RCE1YMR274C YNR021WP53723 404 aaKnown RBP9.35□□□□□ -0.91
RCE1YMR274C MOD5P07884 428 aa9.33□□□□□ -0.92
RCE1YMR274C GLC3P32775 704 aa9.33□□□□□ -0.92
RCE1YMR274C HED1Q03937 162 aa9.31□□□□□ -0.92
RCE1YMR274C SCJ1P25303 377 aa9.3□□□□□ -0.92
RCE1YMR274C KXD1P53158 218 aa9.29□□□□□ -0.92
RCE1YMR274C CDC4P07834 779 aa9.28□□□□□ -0.92
RCE1YMR274C HST2P53686 357 aa9.28□□□□□ -0.92
RCE1YMR274C PUS5Q06244 254 aa9.28□□□□□ -0.92
RCE1YMR274C MMP1Q12372 583 aa9.26□□□□□ -0.93
RCE1YMR274C PUS6P53294 404 aa9.25□□□□□ -0.93
RCE1YMR274C GCR2Q01722 534 aa9.24□□□□□ -0.93
RCE1YMR274C GLN1P32288 370 aaKnown RBP9.23□□□□□ -0.93
RCE1YMR274C BRE2P43132 505 aa9.23□□□□□ -0.93
RCE1YMR274C HXT10P43581 546 aa9.23□□□□□ -0.93
RCE1YMR274C TBF1Q02457 562 aa9.22□□□□□ -0.93
RCE1YMR274C PDC1P06169 563 aaKnown RBP9.21□□□□□ -0.94
RCE1YMR274C ESS1P22696 170 aa9.2□□□□□ -0.94
RCE1YMR274C TPD3P31383 635 aa9.2□□□□□ -0.94
RCE1YMR274C TYW1Q08960 810 aaKnown RBP9.2□□□□□ -0.94
RCE1YMR274C AIM7Q12156 149 aa9.2□□□□□ -0.94
RCE1YMR274C TRM1P15565 570 aaKnown RBP9.19□□□□□ -0.94
RCE1YMR274C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.19□□□□□ -0.94not detected
RCE1YMR274C YDL206WQ12424 762 aa9.19□□□□□ -0.94
RCE1YMR274C RPA14P50106 137 aa9.18□□□□□ -0.94
RCE1YMR274C ALR1Q08269 859 aa9.18□□□□□ -0.94
RCE1YMR274C RRD1P40454 393 aaKnown RBP9.17□□□□□ -0.94
RCE1YMR274C MET32Q12041 191 aa9.17□□□□□ -0.94
RCE1YMR274C ASH1P34233 588 aa9.16□□□□□ -0.94
RCE1YMR274C YPR097WQ06839 1073 aa9.16□□□□□ -0.94
RCE1YMR274C YJU3P28321 313 aa9.14□□□□□ -0.95
RCE1YMR274C HST3P53687 447 aa9.13□□□□□ -0.95
RCE1YMR274C SYH1Q02875 849 aaKnown RBP9.13□□□□□ -0.95
RCE1YMR274C AFT1P22149 690 aa9.11□□□□□ -0.95
RCE1YMR274C KTR1P27810 393 aaKnown RBP9.11□□□□□ -0.95
RCE1YMR274C KIP2P28743 706 aa9.1□□□□□ -0.95
RCE1YMR274C CSN12P47130 423 aa9.1□□□□□ -0.95
RCE1YMR274C PKH3Q03306 898 aaPredicted RBP9.09□□□□□ -0.95
RCE1YMR274C GAR1P28007 205 aaKnown RBP9.07□□□□□ -0.96
RCE1YMR274C LEU3P08638 886 aa9.06□□□□□ -0.96
RCE1YMR274C RSC30P38781 883 aa9.06□□□□□ -0.96
RCE1YMR274C ARG8P18544 423 aa9.05□□□□□ -0.96
RCE1YMR274C IXR1P33417 597 aa9.05□□□□□ -0.96
RCE1YMR274C KIN1P13185 1064 aa9.03□□□□□ -0.96
RCE1YMR274C MET22P32179 357 aa9.03□□□□□ -0.96
RCE1YMR274C RGA1P39083 1007 aa9.02□□□□□ -0.97
RCE1YMR274C GBP2P25555 427 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
RCE1YMR274C YJR115WP47152 169 aa9.01□□□□□ -0.97
RCE1YMR274C UGA3P26370 528 aa8.98□□□□□ -0.97
RCE1YMR274C RPN1P38764 993 aaKnown RBP8.98□□□□□ -0.97
RCE1YMR274C ENV9Q08651 330 aa8.98□□□□□ -0.97
RCE1YMR274C VAC17P25591 423 aa8.97□□□□□ -0.97
RCE1YMR274C MSB3P48566 633 aaPredicted RBP8.97□□□□□ -0.97
RCE1YMR274C YDR444WQ04093 687 aa8.97□□□□□ -0.97
RCE1YMR274C RAD59Q12223 238 aa8.97□□□□□ -0.97
RCE1YMR274C MRT4P33201 236 aaKnown RBP8.95□□□□□ -0.98
RCE1YMR274C SSA2P10592 639 aaKnown RBP8.94□□□□□ -0.98
RCE1YMR274C YPL062WQ02781 134 aa8.93□□□□□ -0.98
RCE1YMR274C ITT1Q04638 464 aa8.91□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms