RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C GCD11P32481 527 aaKnown RBP5.91□□□□□ -1.46
VTI1YMR197C TY1A-JR2P47099 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-DR1Q03856 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-ML1Q04706 440 aaKnown RBP5.91□□□□□ -1.46
VTI1YMR197C TY1A-BRQ12217 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-NL2Q12470 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-GR2Q12485 440 aa5.91□□□□□ -1.46
VTI1YMR197C SAS10Q12136 610 aaPredicted RBP5.9□□□□□ -1.46
VTI1YMR197C SEC2P17065 759 aa5.89□□□□□ -1.47
VTI1YMR197C MAM3Q12296 706 aa5.89□□□□□ -1.47
VTI1YMR197C ERG12P07277 443 aa5.88□□□□□ -1.47
VTI1YMR197C TRK1P12685 1235 aa5.88□□□□□ -1.47
VTI1YMR197C PSE1P32337 1089 aaKnown RBP5.87□□□□□ -1.47
VTI1YMR197C SPT16P32558 1035 aaKnown RBP5.87□□□□□ -1.47
VTI1YMR197C DSF2P38213 736 aa5.85□□□□□ -1.47
VTI1YMR197C IES2P40154 320 aa5.85□□□□□ -1.47
VTI1YMR197C KEX2P13134 814 aa5.84□□□□□ -1.47
VTI1YMR197C CST6P40535 587 aa5.84□□□□□ -1.47
VTI1YMR197C RRN7P40992 514 aa5.84□□□□□ -1.47
VTI1YMR197C ERF2Q06551 359 aa5.82□□□□□ -1.48
VTI1YMR197C PAT1P25644 796 aaKnown RBP5.81□□□□□ -1.48
VTI1YMR197C CLB5P30283 435 aa5.81□□□□□ -1.48
VTI1YMR197C SPB4P25808 606 aaPredicted RBP5.8□□□□□ -1.48
VTI1YMR197C FRK1Q03002 865 aaPredicted RBP5.8□□□□□ -1.48
VTI1YMR197C LAM6Q08001 693 aa5.8□□□□□ -1.48
VTI1YMR197C AIR1P40507 360 aaKnown RBP5.79□□□□□ -1.48
VTI1YMR197C CLA4P48562 842 aa5.79□□□□□ -1.48
VTI1YMR197C NUP42P49686 430 aaKnown RBP5.79□□□□□ -1.48
VTI1YMR197C BDP1P46678 594 aa5.78□□□□□ -1.48
VTI1YMR197C TEA1P47988 759 aa5.76□□□□□ -1.49
VTI1YMR197C DIT2P21595 489 aa5.75□□□□□ -1.49
VTI1YMR197C PAC1P39946 494 aaKnown RBP5.75□□□□□ -1.49
VTI1YMR197C RTF1P53064 558 aa5.74□□□□□ -1.49
VTI1YMR197C TUB4P53378 473 aa5.74□□□□□ -1.49
VTI1YMR197C AGE1Q04412 482 aa5.74□□□□□ -1.49
VTI1YMR197C NIS1P53939 407 aa5.73□□□□□ -1.49
VTI1YMR197C BRE2P43132 505 aa5.72□□□□□ -1.49
VTI1YMR197C YNL115CP53925 644 aa5.72□□□□□ -1.49
VTI1YMR197C SIT4P20604 311 aa5.71□□□□□ -1.5
VTI1YMR197C CDC4P07834 779 aa5.7□□□□□ -1.5
VTI1YMR197C HED1Q03937 162 aa5.7□□□□□ -1.5
VTI1YMR197C MOD5P07884 428 aa5.69□□□□□ -1.5
VTI1YMR197C GCR2Q01722 534 aa5.68□□□□□ -1.5
VTI1YMR197C YMR196WQ04336 1088 aa5.68□□□□□ -1.5
VTI1YMR197C FPK1P53739 893 aa5.67□□□□□ -1.5
VTI1YMR197C PUS5Q06244 254 aa5.67□□□□□ -1.5
VTI1YMR197C SLY41P22215 453 aa5.65□□□□□ -1.5
VTI1YMR197C KXD1P53158 218 aa5.64□□□□□ -1.51
VTI1YMR197C MET32Q12041 191 aa5.63□□□□□ -1.51
VTI1YMR197C ATF2P53296 535 aa5.62□□□□□ -1.51
VTI1YMR197C PDC1P06169 563 aaKnown RBP5.61□□□□□ -1.51
VTI1YMR197C GAR1P28007 205 aaKnown RBP5.61□□□□□ -1.51
VTI1YMR197C RRD1P40454 393 aaKnown RBP5.61□□□□□ -1.51
VTI1YMR197C HXT10P43581 546 aa5.61□□□□□ -1.51
VTI1YMR197C SCJ1P25303 377 aa5.6□□□□□ -1.51
VTI1YMR197C TPD3P31383 635 aa5.6□□□□□ -1.51
VTI1YMR197C ASH1P34233 588 aa5.6□□□□□ -1.51
VTI1YMR197C HST2P53686 357 aa5.6□□□□□ -1.51
VTI1YMR197C TBF1Q02457 562 aa5.6□□□□□ -1.51
VTI1YMR197C AFT1P22149 690 aa5.59□□□□□ -1.51
VTI1YMR197C GLC3P32775 704 aa5.59□□□□□ -1.51
VTI1YMR197C HST3P53687 447 aa5.59□□□□□ -1.51
VTI1YMR197C YNR021WP53723 404 aaKnown RBP5.59□□□□□ -1.51
VTI1YMR197C YDL206WQ12424 762 aa5.59□□□□□ -1.51
VTI1YMR197C PUS6P53294 404 aa5.58□□□□□ -1.52
VTI1YMR197C ALR1Q08269 859 aa5.58□□□□□ -1.52
VTI1YMR197C MMP1Q12372 583 aa5.58□□□□□ -1.52
VTI1YMR197C TRM1P15565 570 aaKnown RBP5.57□□□□□ -1.52
VTI1YMR197C RPA14P50106 137 aa5.57□□□□□ -1.52
VTI1YMR197C YPL062WQ02781 134 aa5.57□□□□□ -1.52
VTI1YMR197C SYH1Q02875 849 aaKnown RBP5.57□□□□□ -1.52
VTI1YMR197C GBP2P25555 427 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
VTI1YMR197C MET22P32179 357 aa5.56□□□□□ -1.52
VTI1YMR197C GLN1P32288 370 aaKnown RBP5.56□□□□□ -1.52
VTI1YMR197C ESS1P22696 170 aa5.55□□□□□ -1.52
VTI1YMR197C YPR097WQ06839 1073 aa5.55□□□□□ -1.52
VTI1YMR197C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
VTI1YMR197C ENV9Q08651 330 aa5.54□□□□□ -1.52
VTI1YMR197C RQC2Q12532 1038 aaKnown RBP5.54□□□□□ -1.52
VTI1YMR197C KIP2P28743 706 aa5.53□□□□□ -1.52
VTI1YMR197C YDR444WQ04093 687 aa5.53□□□□□ -1.52
VTI1YMR197C TYW1Q08960 810 aaKnown RBP5.53□□□□□ -1.52
VTI1YMR197C YJU3P28321 313 aa5.52□□□□□ -1.53
VTI1YMR197C YJR115WP47152 169 aa5.52□□□□□ -1.53
VTI1YMR197C AIM7Q12156 149 aa5.51□□□□□ -1.53
VTI1YMR197C IXR1P33417 597 aa5.5□□□□□ -1.53
VTI1YMR197C MSB3P48566 633 aaPredicted RBP5.5□□□□□ -1.53
VTI1YMR197C KTR1P27810 393 aaKnown RBP5.49□□□□□ -1.53
VTI1YMR197C LCB5Q06147 687 aaKnown RBP5.49□□□□□ -1.53
VTI1YMR197C UGA3P26370 528 aa5.48□□□□□ -1.53
VTI1YMR197C PKH3Q03306 898 aaPredicted RBP5.48□□□□□ -1.53
VTI1YMR197C RSC30P38781 883 aa5.46□□□□□ -1.54
VTI1YMR197C ARG8P18544 423 aa5.45□□□□□ -1.54
VTI1YMR197C VAC17P25591 423 aa5.45□□□□□ -1.54
VTI1YMR197C MRT4P33201 236 aaKnown RBP5.45□□□□□ -1.54
VTI1YMR197C PTK2P47116 818 aaKnown RBP5.45□□□□□ -1.54
VTI1YMR197C CSN12P47130 423 aa5.45□□□□□ -1.54
VTI1YMR197C SRF1Q12516 437 aa5.45□□□□□ -1.54
VTI1YMR197C YDL176WQ12027 708 aa5.42□□□□□ -1.54
VTI1YMR197C ITT1Q04638 464 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 40 ms