RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W SRB8P25648 1427 aa5.02□□□□□ -1.61
ECM16YMR128W NTE1Q04958 1679 aa5.02□□□□□ -1.61
ECM16YMR128W URN1Q06525 465 aaKnown RBP5.01□□□□□ -1.61
ECM16YMR128W YLR419WQ06698 1435 aaKnown RBP5.01□□□□□ -1.61
ECM16YMR128W PTC3P34221 468 aaKnown RBP5.01□□□□□ -1.61
ECM16YMR128W YMR1P47147 688 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
ECM16YMR128W RPO21P04050 1733 aaKnown RBP5.01□□□□□ -1.61
ECM16YMR128W COX6P00427 148 aa5□□□□□ -1.61
ECM16YMR128W DBP1P24784 617 aaKnown RBP5□□□□□ -1.61
ECM16YMR128W RPA190P10964 1664 aaKnown RBP5□□□□□ -1.61
ECM16YMR128W YNR021WP53723 404 aaKnown RBP5□□□□□ -1.61
ECM16YMR128W GEA2P39993 1459 aaKnown RBP5□□□□□ -1.61
ECM16YMR128W KIN1P13185 1064 aa5□□□□□ -1.61
ECM16YMR128W YFR006WP43590 535 aa5□□□□□ -1.61
ECM16YMR128W KTR1P27810 393 aaKnown RBP4.99□□□□□ -1.61
ECM16YMR128W GLC3P32775 704 aa4.99□□□□□ -1.61
ECM16YMR128W IQG1Q12280 1495 aa4.99□□□□□ -1.61
ECM16YMR128W YLR326WQ06170 240 aaKnown RBP4.99□□□□□ -1.61
ECM16YMR128W AIM7Q12156 149 aa4.99□□□□□ -1.61
ECM16YMR128W CAT8P39113 1433 aa4.98□□□□□ -1.61
ECM16YMR128W MST1P07236 462 aa4.97□□□□□ -1.61
ECM16YMR128W PDR12Q02785 1511 aa4.97□□□□□ -1.61
ECM16YMR128W SPO14P36126 1683 aa4.97□□□□□ -1.61
ECM16YMR128W GAP1P19145 602 aaPredicted RBP4.96□□□□□ -1.61
ECM16YMR128W GLN1P32288 370 aaKnown RBP4.96□□□□□ -1.61
ECM16YMR128W ILV3P39522 585 aaKnown RBP4.96□□□□□ -1.62
ECM16YMR128W MIF2P35201 549 aa4.95□□□□□ -1.62
ECM16YMR128W MHP1P43638 1398 aa4.95□□□□□ -1.62
ECM16YMR128W PCS60P38137 543 aaKnown RBP RIP-Chip data4.95□□□□□ -1.62not detected
ECM16YMR128W IES2P40154 320 aa4.95□□□□□ -1.62
ECM16YMR128W SPB4P25808 606 aaPredicted RBP4.94□□□□□ -1.62
ECM16YMR128W PDR5P33302 1511 aaKnown RBP4.94□□□□□ -1.62
ECM16YMR128W PKC1P24583 1151 aa4.93□□□□□ -1.62
ECM16YMR128W REF2P42073 533 aaPredicted RBP4.93□□□□□ -1.62
ECM16YMR128W NOP7P53261 605 aaKnown RBP4.93□□□□□ -1.62
ECM16YMR128W YRF1-1P0CX20 1796 aa4.93□□□□□ -1.62
ECM16YMR128W YRF1-5P0CX21 1796 aa4.93□□□□□ -1.62
ECM16YMR128W YRF1-8P0CX22 1796 aa4.93□□□□□ -1.62
ECM16YMR128W VMA1P17255 1071 aaKnown RBP4.93□□□□□ -1.62
ECM16YMR128W YSP2Q06681 1438 aa4.93□□□□□ -1.62
ECM16YMR128W YOR093CQ12275 1648 aa4.92□□□□□ -1.62
ECM16YMR128W BUD21Q08492 214 aaPredicted RBP4.92□□□□□ -1.62
ECM16YMR128W RLF2Q12495 606 aa4.92□□□□□ -1.62
ECM16YMR128W SLX5P32828 619 aaKnown RBP4.91□□□□□ -1.62
ECM16YMR128W SAM3Q08986 587 aa4.91□□□□□ -1.62
ECM16YMR128W PDR11P40550 1411 aa4.91□□□□□ -1.62
ECM16YMR128W TY3B-IQ7LHG5 1498 aaKnown RBP4.91□□□□□ -1.62
ECM16YMR128W YOR238WQ08634 303 aa4.9□□□□□ -1.62
ECM16YMR128W LTE1P07866 1435 aa4.9□□□□□ -1.62
ECM16YMR128W ORC6P38826 435 aa4.9□□□□□ -1.63
ECM16YMR128W MAM3Q12296 706 aa4.9□□□□□ -1.63
ECM16YMR128W NUP157P40064 1391 aaKnown RBP4.9□□□□□ -1.63
ECM16YMR128W DOP1Q03921 1698 aa4.9□□□□□ -1.63
ECM16YMR128W IME2P32581 645 aa4.9□□□□□ -1.63
ECM16YMR128W PDS5Q04264 1277 aa4.9□□□□□ -1.63
ECM16YMR128W OPY1P38271 328 aa4.89□□□□□ -1.63
ECM16YMR128W YGR273CP53329 174 aa4.89□□□□□ -1.63
ECM16YMR128W NUP192P47054 1683 aa4.87□□□□□ -1.63
ECM16YMR128W TAF5P38129 798 aa4.87□□□□□ -1.63
ECM16YMR128W YFR016CP43597 1233 aaKnown RBP4.87□□□□□ -1.63
ECM16YMR128W PIB1Q06651 286 aa4.87□□□□□ -1.63
ECM16YMR128W VMR1P38735 1592 aa4.87□□□□□ -1.63
ECM16YMR128W CHC1P22137 1653 aaKnown RBP4.86□□□□□ -1.63
ECM16YMR128W RPC31P17890 251 aa4.86□□□□□ -1.63
ECM16YMR128W YGL015CP33199 130 aa4.86□□□□□ -1.63
ECM16YMR128W KEX1P09620 729 aa4.86□□□□□ -1.63
ECM16YMR128W VHR2P40041 505 aa4.86□□□□□ -1.63
ECM16YMR128W KIP3P53086 805 aaKnown RBP4.86□□□□□ -1.63
ECM16YMR128W HPC2Q01448 625 aa4.86□□□□□ -1.63
ECM16YMR128W TFB3Q03290 321 aa4.86□□□□□ -1.63
ECM16YMR128W MET10P39692 1035 aa4.85□□□□□ -1.63
ECM16YMR128W NOP8Q08287 484 aaPredicted RBP4.85□□□□□ -1.63
ECM16YMR128W RVB2Q12464 471 aaKnown RBP4.85□□□□□ -1.63
ECM16YMR128W RGR1P19263 1082 aa4.84□□□□□ -1.63
ECM16YMR128W DRS2P39524 1355 aa4.83□□□□□ -1.64
ECM16YMR128W TGL3P40308 642 aa4.83□□□□□ -1.64
ECM16YMR128W MMS1Q06211 1407 aa4.83□□□□□ -1.64
ECM16YMR128W MAK21Q12176 1025 aaKnown RBP4.83□□□□□ -1.64
ECM16YMR128W PAF1P38351 445 aa4.82□□□□□ -1.64
ECM16YMR128W SEC7P11075 2009 aaKnown RBP4.82□□□□□ -1.64
ECM16YMR128W RAV1P47104 1357 aa4.82□□□□□ -1.64
ECM16YMR128W EBP2P36049 427 aaKnown RBP4.82□□□□□ -1.64
ECM16YMR128W RSC30P38781 883 aa4.82□□□□□ -1.64
ECM16YMR128W RTC1Q08281 1341 aa4.82□□□□□ -1.64
ECM16YMR128W DNF2Q12675 1612 aa4.82□□□□□ -1.64
ECM16YMR128W TRK1P12685 1235 aa4.82□□□□□ -1.64
ECM16YMR128W CAB3P36076 571 aa4.81□□□□□ -1.64
ECM16YMR128W MLP1Q02455 1875 aaKnown RBP4.81□□□□□ -1.64
ECM16YMR128W GUT1P32190 709 aa4.81□□□□□ -1.64
ECM16YMR128W ATG32P40458 529 aa4.81□□□□□ -1.64
ECM16YMR128W SUB2Q07478 446 aaKnown RBP4.81□□□□□ -1.64
ECM16YMR128W BNR1P40450 1375 aa4.81□□□□□ -1.64
ECM16YMR128W MVP1P40959 511 aaKnown RBP4.8□□□□□ -1.64
ECM16YMR128W YEF3P16521 1044 aaKnown RBP4.8□□□□□ -1.64
ECM16YMR128W CLC1P17891 233 aa4.8□□□□□ -1.64
ECM16YMR128W NIS1P53939 407 aa4.8□□□□□ -1.64
ECM16YMR128W ERG12P07277 443 aa4.79□□□□□ -1.64
ECM16YMR128W SUI2P20459 304 aaKnown RBP4.79□□□□□ -1.64
ECM16YMR128W PSE1P32337 1089 aaKnown RBP4.79□□□□□ -1.64
ECM16YMR128W NOB1Q08444 459 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms