RNA–Protein interactions for RNA: YMR028W

TAP42, Transcript of Essential protein involved in the TOR signaling pathway, yeastyeast

Gene TAP42, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAP42YMR028W TY1A-BRQ12217 440 aa9.2□□□□□ -0.94
TAP42YMR028W TY1A-NL2Q12470 440 aa9.2□□□□□ -0.94
TAP42YMR028W TY1A-GR2Q12485 440 aa9.2□□□□□ -0.94
TAP42YMR028W SEC2P17065 759 aa9.19□□□□□ -0.94
TAP42YMR028W RGR1P19263 1082 aa9.19□□□□□ -0.94
TAP42YMR028W GCD11P32481 527 aaKnown RBP9.19□□□□□ -0.94
TAP42YMR028W SPT16P32558 1035 aaKnown RBP9.17□□□□□ -0.94
TAP42YMR028W CST6P40535 587 aa9.16□□□□□ -0.94
TAP42YMR028W YPR109WQ06104 294 aa9.16□□□□□ -0.94
TAP42YMR028W LAM6Q08001 693 aa9.14□□□□□ -0.95
TAP42YMR028W CKB1P43639 278 aa9.11□□□□□ -0.95
TAP42YMR028W PAT1P25644 796 aaKnown RBP9.09□□□□□ -0.95
TAP42YMR028W AIR1P40507 360 aaKnown RBP9.09□□□□□ -0.95
TAP42YMR028W BRE2P43132 505 aa9.08□□□□□ -0.96
TAP42YMR028W RRN7P40992 514 aa9.07□□□□□ -0.96
TAP42YMR028W CLA4P48562 842 aa9.07□□□□□ -0.96
TAP42YMR028W GCR2Q01722 534 aa9.07□□□□□ -0.96
TAP42YMR028W PBS2P08018 668 aa9.05□□□□□ -0.96
TAP42YMR028W PSE1P32337 1089 aaKnown RBP9.05□□□□□ -0.96
TAP42YMR028W CDC4P07834 779 aa9.03□□□□□ -0.96
TAP42YMR028W BDP1P46678 594 aa9.03□□□□□ -0.96
TAP42YMR028W FRK1Q03002 865 aaPredicted RBP9.03□□□□□ -0.96
TAP42YMR028W KEX2P13134 814 aa9.01□□□□□ -0.97
TAP42YMR028W YPL062WQ02781 134 aa9.01□□□□□ -0.97
TAP42YMR028W CLB5P30283 435 aa9□□□□□ -0.97
TAP42YMR028W HED1Q03937 162 aa9□□□□□ -0.97
TAP42YMR028W ERF2Q06551 359 aa9□□□□□ -0.97
TAP42YMR028W MOD5P07884 428 aa8.94□□□□□ -0.98
TAP42YMR028W RTF1P53064 558 aa8.94□□□□□ -0.98
TAP42YMR028W MAM3Q12296 706 aa8.94□□□□□ -0.98
TAP42YMR028W DSF2P38213 736 aa8.92□□□□□ -0.98
TAP42YMR028W PAC1P39946 494 aaKnown RBP8.92□□□□□ -0.98
TAP42YMR028W AGE1Q04412 482 aa8.92□□□□□ -0.98
TAP42YMR028W SAS10Q12136 610 aaPredicted RBP8.91□□□□□ -0.98
TAP42YMR028W TUB4P53378 473 aa8.89□□□□□ -0.99
TAP42YMR028W GAR1P28007 205 aaKnown RBP8.88□□□□□ -0.99
TAP42YMR028W YNL115CP53925 644 aa8.88□□□□□ -0.99
TAP42YMR028W SIT4P20604 311 aa8.87□□□□□ -0.99
TAP42YMR028W MET22P32179 357 aa8.86□□□□□ -0.99
TAP42YMR028W IES2P40154 320 aa8.85□□□□□ -0.99
TAP42YMR028W ENV9Q08651 330 aa8.85□□□□□ -0.99
TAP42YMR028W GBP2P25555 427 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
TAP42YMR028W AFT1P22149 690 aa8.83□□□□□ -1
TAP42YMR028W TEA1P47988 759 aa8.83□□□□□ -1
TAP42YMR028W NUP42P49686 430 aaKnown RBP8.83□□□□□ -1
TAP42YMR028W MET32Q12041 191 aa8.83□□□□□ -1
TAP42YMR028W ASH1P34233 588 aa8.81□□□□□ -1
TAP42YMR028W TPD3P31383 635 aa8.8□□□□□ -1
TAP42YMR028W PUS5Q06244 254 aa8.79□□□□□ -1
TAP42YMR028W HST3P53687 447 aa8.78□□□□□ -1
TAP42YMR028W KXD1P53158 218 aa8.77□□□□□ -1.01
TAP42YMR028W NIS1P53939 407 aa8.77□□□□□ -1.01
TAP42YMR028W YDR444WQ04093 687 aa8.77□□□□□ -1.01
TAP42YMR028W LCB5Q06147 687 aaKnown RBP8.74□□□□□ -1.01
TAP42YMR028W DMA1P38823 416 aa8.73□□□□□ -1.01
TAP42YMR028W HXT10P43581 546 aa8.73□□□□□ -1.01
TAP42YMR028W DIT2P21595 489 aa8.72□□□□□ -1.01
TAP42YMR028W RRD1P40454 393 aaKnown RBP8.71□□□□□ -1.02
TAP42YMR028W SPB4P25808 606 aaPredicted RBP8.7□□□□□ -1.02
TAP42YMR028W PDC1P06169 563 aaKnown RBP8.69□□□□□ -1.02
TAP42YMR028W FPK1P53739 893 aa8.69□□□□□ -1.02
TAP42YMR028W SYH1Q02875 849 aaKnown RBP8.69□□□□□ -1.02
TAP42YMR028W SLY41P22215 453 aa8.68□□□□□ -1.02
TAP42YMR028W YJR115WP47152 169 aa8.68□□□□□ -1.02
TAP42YMR028W MSB3P48566 633 aaPredicted RBP8.66□□□□□ -1.02
TAP42YMR028W YMR196WQ04336 1088 aa8.65□□□□□ -1.02
TAP42YMR028W YDL176WQ12027 708 aa8.65□□□□□ -1.02
TAP42YMR028W RPA14P50106 137 aa8.64□□□□□ -1.03
TAP42YMR028W PUS6P53294 404 aa8.64□□□□□ -1.03
TAP42YMR028W ALR1Q08269 859 aa8.63□□□□□ -1.03
TAP42YMR028W YPR097WQ06839 1073 aa8.62□□□□□ -1.03
TAP42YMR028W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
TAP42YMR028W HST2P53686 357 aa8.61□□□□□ -1.03
TAP42YMR028W TBF1Q02457 562 aa8.58□□□□□ -1.04
TAP42YMR028W YDL206WQ12424 762 aa8.58□□□□□ -1.04
TAP42YMR028W UGA3P26370 528 aa8.56□□□□□ -1.04
TAP42YMR028W MRT4P33201 236 aaKnown RBP8.56□□□□□ -1.04
TAP42YMR028W RTT106P40161 455 aa8.56□□□□□ -1.04
TAP42YMR028W TRM1P15565 570 aaKnown RBP8.55□□□□□ -1.04
TAP42YMR028W KIP2P28743 706 aa8.55□□□□□ -1.04
TAP42YMR028W PTK2P47116 818 aaKnown RBP8.54□□□□□ -1.04
TAP42YMR028W SCJ1P25303 377 aa8.53□□□□□ -1.04
TAP42YMR028W MMP1Q12372 583 aa8.53□□□□□ -1.04
TAP42YMR028W IXR1P33417 597 aa8.52□□□□□ -1.05
TAP42YMR028W ACO2P39533 789 aa8.52□□□□□ -1.05
TAP42YMR028W YLR346CQ06139 101 aa8.51□□□□□ -1.05
TAP42YMR028W GLN1P32288 370 aaKnown RBP8.5□□□□□ -1.05
TAP42YMR028W ATF2P53296 535 aa8.5□□□□□ -1.05
TAP42YMR028W SRF1Q12516 437 aa8.5□□□□□ -1.05
TAP42YMR028W OPT2Q06593 877 aa8.49□□□□□ -1.05
TAP42YMR028W NUP85P46673 744 aa8.48□□□□□ -1.05
TAP42YMR028W YNR021WP53723 404 aaKnown RBP8.46□□□□□ -1.06
TAP42YMR028W VAC17P25591 423 aa8.45□□□□□ -1.06
TAP42YMR028W GLY1P37303 387 aaKnown RBP8.45□□□□□ -1.06
TAP42YMR028W CAF120P53836 1060 aa8.45□□□□□ -1.06
TAP42YMR028W ESS1P22696 170 aa8.43□□□□□ -1.06
TAP42YMR028W TYW1Q08960 810 aaKnown RBP8.43□□□□□ -1.06
TAP42YMR028W RSC30P38781 883 aa8.41□□□□□ -1.06
TAP42YMR028W YJU3P28321 313 aa8.4□□□□□ -1.06
TAP42YMR028W MIP1P15801 1254 aa8.38□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms