RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C KEX2P13134 814 aa9.95□□□□□ -0.82
PEX12YMR026C KTR1P27810 393 aaKnown RBP9.95□□□□□ -0.82
PEX12YMR026C GLN1P32288 370 aaKnown RBP9.95□□□□□ -0.82
PEX12YMR026C RTF1P53064 558 aa9.95□□□□□ -0.82
PEX12YMR026C YNL115CP53925 644 aa9.95□□□□□ -0.82
PEX12YMR026C BUD20Q08004 166 aaPredicted RBP9.95□□□□□ -0.82
PEX12YMR026C MMP1Q12372 583 aa9.95□□□□□ -0.82
PEX12YMR026C SCJ1P25303 377 aa9.94□□□□□ -0.82
PEX12YMR026C ERF2Q06551 359 aa9.94□□□□□ -0.82
PEX12YMR026C SSA2P10592 639 aaKnown RBP9.93□□□□□ -0.82
PEX12YMR026C DMA2P53924 522 aa9.93□□□□□ -0.82
PEX12YMR026C GCD11P32481 527 aaKnown RBP9.92□□□□□ -0.82
PEX12YMR026C HPC2Q01448 625 aa9.92□□□□□ -0.82
PEX12YMR026C TY1A-DR4O74302 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-HP0C2I4 478 aaKnown RBP9.89□□□□□ -0.83
PEX12YMR026C TY1A-AP0CX57 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-PR1P0CX58 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-ORP0CX59 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-PR2P0CX60 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-DR5P0CX65 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-ER2P0CX66 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-GR3P0CX67 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-LR1P0CX68 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-MR2P0CX69 440 aa9.89□□□□□ -0.83
PEX12YMR026C SLY41P22215 453 aa9.89□□□□□ -0.83
PEX12YMR026C VRP1P37370 817 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-JR2P47099 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-DR1Q03856 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-ML1Q04706 440 aaKnown RBP9.89□□□□□ -0.83
PEX12YMR026C TY1A-BRQ12217 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-NL2Q12470 440 aa9.89□□□□□ -0.83
PEX12YMR026C TY1A-GR2Q12485 440 aa9.89□□□□□ -0.83
PEX12YMR026C PRT1P06103 763 aaKnown RBP9.88□□□□□ -0.83
PEX12YMR026C SEC2P17065 759 aa9.88□□□□□ -0.83
PEX12YMR026C ESS1P22696 170 aa9.88□□□□□ -0.83
PEX12YMR026C BCK2P33306 851 aa9.85□□□□□ -0.83
PEX12YMR026C YJU3P28321 313 aa9.84□□□□□ -0.83
PEX12YMR026C TFB3Q03290 321 aa9.84□□□□□ -0.83
PEX12YMR026C PKH3Q03306 898 aaPredicted RBP9.84□□□□□ -0.83
PEX12YMR026C HGH1P48362 394 aaKnown RBP9.83□□□□□ -0.84
PEX12YMR026C BRL1P38770 471 aa9.82□□□□□ -0.84
PEX12YMR026C GYP1Q08484 637 aa9.82□□□□□ -0.84
PEX12YMR026C SAS4Q04003 481 aa9.81□□□□□ -0.84
PEX12YMR026C AGE1Q04412 482 aa9.8□□□□□ -0.84
PEX12YMR026C PUS6P53294 404 aa9.79□□□□□ -0.84
PEX12YMR026C TUB4P53378 473 aa9.79□□□□□ -0.84
PEX12YMR026C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.78□□□□□ -0.84not detected
PEX12YMR026C RAD59Q12223 238 aa9.78□□□□□ -0.84
PEX12YMR026C ARG8P18544 423 aa9.77□□□□□ -0.85
PEX12YMR026C PKC1P24583 1151 aa9.77□□□□□ -0.85
PEX12YMR026C RSC30P38781 883 aa9.77□□□□□ -0.85
PEX12YMR026C LAM6Q08001 693 aa9.77□□□□□ -0.85
PEX12YMR026C TRM1P15565 570 aaKnown RBP9.76□□□□□ -0.85
PEX12YMR026C RRN7P40992 514 aa9.76□□□□□ -0.85
PEX12YMR026C PAT1P25644 796 aaKnown RBP9.75□□□□□ -0.85
PEX12YMR026C SPT16P32558 1035 aaKnown RBP9.74□□□□□ -0.85
PEX12YMR026C XDJ1P39102 459 aa9.74□□□□□ -0.85
PEX12YMR026C PAC1P39946 494 aaKnown RBP9.72□□□□□ -0.85
PEX12YMR026C TBF1Q02457 562 aa9.72□□□□□ -0.85
PEX12YMR026C MRF1P30775 413 aaPredicted RBP9.69□□□□□ -0.86
PEX12YMR026C YBL036CP38197 257 aa9.68□□□□□ -0.86
PEX12YMR026C YDL206WQ12424 762 aa9.68□□□□□ -0.86
PEX12YMR026C SDH2P21801 266 aa9.66□□□□□ -0.86
PEX12YMR026C CSE4P36012 229 aa9.66□□□□□ -0.86
PEX12YMR026C RPA14P50106 137 aa9.66□□□□□ -0.86
PEX12YMR026C TAF7Q05021 590 aa9.65□□□□□ -0.86
PEX12YMR026C KXD1P53158 218 aa9.64□□□□□ -0.87
PEX12YMR026C YPR097WQ06839 1073 aa9.64□□□□□ -0.87
PEX12YMR026C ERG12P07277 443 aa9.63□□□□□ -0.87
PEX12YMR026C PDC1P06169 563 aaKnown RBP9.62□□□□□ -0.87
PEX12YMR026C YJL007CP47080 104 aa9.62□□□□□ -0.87
PEX12YMR026C ALR1Q08269 859 aa9.62□□□□□ -0.87
PEX12YMR026C MOD5P07884 428 aa9.61□□□□□ -0.87
PEX12YMR026C MAK16P10962 306 aaPredicted RBP9.61□□□□□ -0.87
PEX12YMR026C HXT10P43581 546 aa9.59□□□□□ -0.87
PEX12YMR026C TPD3P31383 635 aa9.58□□□□□ -0.88
PEX12YMR026C BIM1P40013 344 aa9.58□□□□□ -0.88
PEX12YMR026C YEL077CQ3E7X8 1277 aa9.57□□□□□ -0.88
PEX12YMR026C BIO2P32451 375 aa9.56□□□□□ -0.88
PEX12YMR026C SPT5P27692 1063 aaKnown RBP9.54□□□□□ -0.88
PEX12YMR026C RRD1P40454 393 aaKnown RBP9.54□□□□□ -0.88
PEX12YMR026C ATG32P40458 529 aa9.54□□□□□ -0.88
PEX12YMR026C CST6P40535 587 aa9.53□□□□□ -0.88
PEX12YMR026C BDP1P46678 594 aa9.53□□□□□ -0.88
PEX12YMR026C NAF1P53919 492 aaKnown RBP9.53□□□□□ -0.88
PEX12YMR026C AMS1P22855 1083 aa9.52□□□□□ -0.89
PEX12YMR026C YDJ1P25491 409 aaKnown RBP9.51□□□□□ -0.89
PEX12YMR026C YNL108CP53929 270 aa9.51□□□□□ -0.89
PEX12YMR026C SUP45P12385 437 aaKnown RBP9.5□□□□□ -0.89
PEX12YMR026C FRK1Q03002 865 aaPredicted RBP9.5□□□□□ -0.89
PEX12YMR026C RLF2Q12495 606 aa9.5□□□□□ -0.89
PEX12YMR026C FIG4P42837 879 aa9.49□□□□□ -0.89
PEX12YMR026C RAS1P01119 309 aa9.48□□□□□ -0.89
PEX12YMR026C TIF1P10081 395 aaKnown RBP9.48□□□□□ -0.89
PEX12YMR026C RPL34BP40525 121 aaKnown RBP9.48□□□□□ -0.89
PEX12YMR026C PUS5Q06244 254 aa9.47□□□□□ -0.89
PEX12YMR026C VAC17P25591 423 aa9.46□□□□□ -0.9
PEX12YMR026C DPS1P04802 557 aaKnown RBP9.45□□□□□ -0.9
PEX12YMR026C TEC1P18412 486 aa9.45□□□□□ -0.9
PEX12YMR026C ENO2P00925 437 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms