RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C TY1A-JR2P47099 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-DR1Q03856 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-ML1Q04706 440 aaKnown RBP7.9□□□□□ -1.14
RPN13YLR421C TY1A-BRQ12217 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-NL2Q12470 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-GR2Q12485 440 aa7.9□□□□□ -1.14
RPN13YLR421C SEC2P17065 759 aa7.89□□□□□ -1.15
RPN13YLR421C MAM3Q12296 706 aa7.89□□□□□ -1.15
RPN13YLR421C ERG12P07277 443 aa7.86□□□□□ -1.15
RPN13YLR421C PSE1P32337 1089 aaKnown RBP7.86□□□□□ -1.15
RPN13YLR421C IES2P40154 320 aa7.86□□□□□ -1.15
RPN13YLR421C SPT16P32558 1035 aaKnown RBP7.84□□□□□ -1.15
RPN13YLR421C DSF2P38213 736 aa7.84□□□□□ -1.15
RPN13YLR421C TRK1P12685 1235 aa7.83□□□□□ -1.16
RPN13YLR421C KEX2P13134 814 aa7.83□□□□□ -1.16
RPN13YLR421C ERF2Q06551 359 aa7.83□□□□□ -1.16
RPN13YLR421C CST6P40535 587 aa7.82□□□□□ -1.16
RPN13YLR421C RRN7P40992 514 aa7.82□□□□□ -1.16
RPN13YLR421C SPB4P25808 606 aaPredicted RBP7.81□□□□□ -1.16
RPN13YLR421C NUP42P49686 430 aaKnown RBP7.78□□□□□ -1.16
RPN13YLR421C FRK1Q03002 865 aaPredicted RBP7.77□□□□□ -1.17
RPN13YLR421C PAT1P25644 796 aaKnown RBP7.76□□□□□ -1.17
RPN13YLR421C CLB5P30283 435 aa7.76□□□□□ -1.17
RPN13YLR421C CLA4P48562 842 aa7.76□□□□□ -1.17
RPN13YLR421C LAM6Q08001 693 aa7.75□□□□□ -1.17
RPN13YLR421C DIT2P21595 489 aa7.74□□□□□ -1.17
RPN13YLR421C AIR1P40507 360 aaKnown RBP7.74□□□□□ -1.17
RPN13YLR421C BDP1P46678 594 aa7.72□□□□□ -1.17
RPN13YLR421C TEA1P47988 759 aa7.72□□□□□ -1.17
RPN13YLR421C PAC1P39946 494 aaKnown RBP7.71□□□□□ -1.18
RPN13YLR421C TUB4P53378 473 aa7.69□□□□□ -1.18
RPN13YLR421C NIS1P53939 407 aa7.68□□□□□ -1.18
RPN13YLR421C AGE1Q04412 482 aa7.68□□□□□ -1.18
RPN13YLR421C YNL115CP53925 644 aa7.67□□□□□ -1.18
RPN13YLR421C RTF1P53064 558 aa7.66□□□□□ -1.18
RPN13YLR421C SIT4P20604 311 aa7.65□□□□□ -1.18
RPN13YLR421C MOD5P07884 428 aa7.62□□□□□ -1.19
RPN13YLR421C BRE2P43132 505 aa7.62□□□□□ -1.19
RPN13YLR421C CDC4P07834 779 aa7.61□□□□□ -1.19
RPN13YLR421C FPK1P53739 893 aa7.61□□□□□ -1.19
RPN13YLR421C HED1Q03937 162 aa7.6□□□□□ -1.19
RPN13YLR421C YMR196WQ04336 1088 aa7.6□□□□□ -1.19
RPN13YLR421C PUS5Q06244 254 aa7.6□□□□□ -1.19
RPN13YLR421C SLY41P22215 453 aa7.59□□□□□ -1.19
RPN13YLR421C GCR2Q01722 534 aa7.58□□□□□ -1.2
RPN13YLR421C KXD1P53158 218 aa7.55□□□□□ -1.2
RPN13YLR421C ATF2P53296 535 aa7.55□□□□□ -1.2
RPN13YLR421C SCJ1P25303 377 aa7.54□□□□□ -1.2
RPN13YLR421C MET32Q12041 191 aa7.54□□□□□ -1.2
RPN13YLR421C GLC3P32775 704 aa7.52□□□□□ -1.21
RPN13YLR421C RGA1P39083 1007 aa7.52□□□□□ -1.21
RPN13YLR421C PDC1P06169 563 aaKnown RBP7.51□□□□□ -1.21
RPN13YLR421C HXT10P43581 546 aa7.51□□□□□ -1.21
RPN13YLR421C HST2P53686 357 aa7.5□□□□□ -1.21
RPN13YLR421C YNR021WP53723 404 aaKnown RBP7.5□□□□□ -1.21
RPN13YLR421C GAR1P28007 205 aaKnown RBP7.49□□□□□ -1.21
RPN13YLR421C ASH1P34233 588 aa7.49□□□□□ -1.21
RPN13YLR421C RRD1P40454 393 aaKnown RBP7.49□□□□□ -1.21
RPN13YLR421C PUS6P53294 404 aa7.49□□□□□ -1.21
RPN13YLR421C TBF1Q02457 562 aa7.49□□□□□ -1.21
RPN13YLR421C YDL206WQ12424 762 aa7.49□□□□□ -1.21
RPN13YLR421C TPD3P31383 635 aa7.48□□□□□ -1.21
RPN13YLR421C MMP1Q12372 583 aa7.48□□□□□ -1.21
RPN13YLR421C TRM1P15565 570 aaKnown RBP7.47□□□□□ -1.21
RPN13YLR421C HST3P53687 447 aa7.47□□□□□ -1.21
RPN13YLR421C AFT1P22149 690 aa7.46□□□□□ -1.22
RPN13YLR421C ESS1P22696 170 aa7.45□□□□□ -1.22
RPN13YLR421C GLN1P32288 370 aaKnown RBP7.45□□□□□ -1.22
RPN13YLR421C RPA14P50106 137 aa7.45□□□□□ -1.22
RPN13YLR421C ALR1Q08269 859 aa7.45□□□□□ -1.22
RPN13YLR421C RQC2Q12532 1038 aaKnown RBP7.45□□□□□ -1.22
RPN13YLR421C SYH1Q02875 849 aaKnown RBP7.44□□□□□ -1.22
RPN13YLR421C TYW1Q08960 810 aaKnown RBP7.44□□□□□ -1.22
RPN13YLR421C GBP2P25555 427 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
RPN13YLR421C MET22P32179 357 aa7.43□□□□□ -1.22
RPN13YLR421C YJU3P28321 313 aa7.42□□□□□ -1.22
RPN13YLR421C YPR097WQ06839 1073 aa7.42□□□□□ -1.22
RPN13YLR421C KIP2P28743 706 aa7.41□□□□□ -1.22
RPN13YLR421C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
RPN13YLR421C YPL062WQ02781 134 aa7.4□□□□□ -1.22
RPN13YLR421C YJR115WP47152 169 aa7.39□□□□□ -1.23
RPN13YLR421C RGA2Q06407 1009 aa7.39□□□□□ -1.23
RPN13YLR421C ENV9Q08651 330 aa7.39□□□□□ -1.23
RPN13YLR421C YDR444WQ04093 687 aa7.38□□□□□ -1.23
RPN13YLR421C KTR1P27810 393 aaKnown RBP7.37□□□□□ -1.23
RPN13YLR421C IXR1P33417 597 aa7.37□□□□□ -1.23
RPN13YLR421C AIM7Q12156 149 aa7.37□□□□□ -1.23
RPN13YLR421C PKH3Q03306 898 aaPredicted RBP7.36□□□□□ -1.23
RPN13YLR421C UGA3P26370 528 aa7.33□□□□□ -1.24
RPN13YLR421C RSC30P38781 883 aa7.33□□□□□ -1.24
RPN13YLR421C MSB3P48566 633 aaPredicted RBP7.33□□□□□ -1.24
RPN13YLR421C CSN12P47130 423 aa7.32□□□□□ -1.24
RPN13YLR421C LCB5Q06147 687 aaKnown RBP7.32□□□□□ -1.24
RPN13YLR421C ARG8P18544 423 aa7.31□□□□□ -1.24
RPN13YLR421C VAC17P25591 423 aa7.29□□□□□ -1.24
RPN13YLR421C MRT4P33201 236 aaKnown RBP7.29□□□□□ -1.24
RPN13YLR421C PTK2P47116 818 aaKnown RBP7.28□□□□□ -1.24
RPN13YLR421C ITT1Q04638 464 aa7.27□□□□□ -1.25
RPN13YLR421C SRF1Q12516 437 aa7.27□□□□□ -1.25
RPN13YLR421C RAD59Q12223 238 aa7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms