RNA–Protein interactions for RNA: YLR306W

UBC12, Transcript of Enzyme that mediates the conjugation of Rub1p, yeastyeast

Gene UBC12, Length 567 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC12YLR306W TY1A-LR1P0CX68 440 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-MR2P0CX69 440 aa10.48□□□□□ -0.73
UBC12YLR306W AMS1P22855 1083 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-JR2P47099 440 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-DR1Q03856 440 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-ML1Q04706 440 aaKnown RBP10.48□□□□□ -0.73
UBC12YLR306W TY1A-BRQ12217 440 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-NL2Q12470 440 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-GR2Q12485 440 aa10.48□□□□□ -0.73
UBC12YLR306W RAS1P01119 309 aa10.47□□□□□ -0.73
UBC12YLR306W MRF1P30775 413 aaPredicted RBP10.47□□□□□ -0.73
UBC12YLR306W SEC2P17065 759 aa10.44□□□□□ -0.74
UBC12YLR306W SRC1Q03707 834 aa10.44□□□□□ -0.74
UBC12YLR306W GCD11P32481 527 aaKnown RBP10.43□□□□□ -0.74
UBC12YLR306W YEL077CQ3E7X8 1277 aa10.43□□□□□ -0.74
UBC12YLR306W DIT2P21595 489 aa10.41□□□□□ -0.74
UBC12YLR306W KEX2P13134 814 aa10.36□□□□□ -0.75
UBC12YLR306W ERG12P07277 443 aa10.35□□□□□ -0.75
UBC12YLR306W TEA1P47988 759 aa10.35□□□□□ -0.75
UBC12YLR306W SPT16P32558 1035 aaKnown RBP10.34□□□□□ -0.75
UBC12YLR306W RTF1P53064 558 aa10.34□□□□□ -0.75
UBC12YLR306W ERF2Q06551 359 aa10.34□□□□□ -0.75
UBC12YLR306W SIT4P20604 311 aa10.33□□□□□ -0.76
UBC12YLR306W RRN7P40992 514 aa10.31□□□□□ -0.76
UBC12YLR306W PAT1P25644 796 aaKnown RBP10.3□□□□□ -0.76
UBC12YLR306W YNL115CP53925 644 aa10.28□□□□□ -0.76
UBC12YLR306W NIS1P53939 407 aa10.28□□□□□ -0.76
UBC12YLR306W CST6P40535 587 aa10.27□□□□□ -0.77
UBC12YLR306W YNR021WP53723 404 aaKnown RBP10.26□□□□□ -0.77
UBC12YLR306W AGE1Q04412 482 aa10.26□□□□□ -0.77
UBC12YLR306W LAM6Q08001 693 aa10.26□□□□□ -0.77
UBC12YLR306W TRK1P12685 1235 aa10.24□□□□□ -0.77
UBC12YLR306W PAC1P39946 494 aaKnown RBP10.21□□□□□ -0.77
UBC12YLR306W TUB4P53378 473 aa10.21□□□□□ -0.77
UBC12YLR306W FPK1P53739 893 aa10.2□□□□□ -0.78
UBC12YLR306W MOD5P07884 428 aa10.18□□□□□ -0.78
UBC12YLR306W BDP1P46678 594 aa10.18□□□□□ -0.78
UBC12YLR306W ATF2P53296 535 aa10.17□□□□□ -0.78
UBC12YLR306W YMR196WQ04336 1088 aa10.16□□□□□ -0.78
UBC12YLR306W GLC3P32775 704 aa10.15□□□□□ -0.78
UBC12YLR306W HST2P53686 357 aa10.15□□□□□ -0.78
UBC12YLR306W FRK1Q03002 865 aaPredicted RBP10.15□□□□□ -0.78
UBC12YLR306W AIM7Q12156 149 aa10.14□□□□□ -0.79
UBC12YLR306W CLA4P48562 842 aa10.12□□□□□ -0.79
UBC12YLR306W SLY41P22215 453 aa10.11□□□□□ -0.79
UBC12YLR306W AIR1P40507 360 aaKnown RBP10.1□□□□□ -0.79
UBC12YLR306W TPD3P31383 635 aa10.09□□□□□ -0.79
UBC12YLR306W HED1Q03937 162 aa10.09□□□□□ -0.79
UBC12YLR306W CDC4P07834 779 aa10.08□□□□□ -0.8
UBC12YLR306W LEU3P08638 886 aa10.06□□□□□ -0.8
UBC12YLR306W KXD1P53158 218 aa10.06□□□□□ -0.8
UBC12YLR306W MMP1Q12372 583 aa10.05□□□□□ -0.8
UBC12YLR306W GLN1P32288 370 aaKnown RBP10.04□□□□□ -0.8
UBC12YLR306W BUB1P41695 1021 aaKnown RBP RIP-Chip data10.04□□□□□ -0.8not detected
UBC12YLR306W PUS6P53294 404 aa10.04□□□□□ -0.8
UBC12YLR306W SCJ1P25303 377 aa10.03□□□□□ -0.8
UBC12YLR306W PDC1P06169 563 aaKnown RBP10.02□□□□□ -0.81
UBC12YLR306W HXT10P43581 546 aa10.02□□□□□ -0.81
UBC12YLR306W RRD1P40454 393 aaKnown RBP10.01□□□□□ -0.81
UBC12YLR306W RPA14P50106 137 aa10.01□□□□□ -0.81
UBC12YLR306W TRM1P15565 570 aaKnown RBP9.99□□□□□ -0.81
UBC12YLR306W BRE2P43132 505 aa9.99□□□□□ -0.81
UBC12YLR306W TBF1Q02457 562 aa9.99□□□□□ -0.81
UBC12YLR306W YPR097WQ06839 1073 aa9.99□□□□□ -0.81
UBC12YLR306W PUS5Q06244 254 aa9.98□□□□□ -0.81
UBC12YLR306W YDL206WQ12424 762 aa9.98□□□□□ -0.81
UBC12YLR306W ALR1Q08269 859 aa9.97□□□□□ -0.81
UBC12YLR306W ESS1P22696 170 aa9.96□□□□□ -0.82
UBC12YLR306W MET32Q12041 191 aa9.95□□□□□ -0.82
UBC12YLR306W KTR1P27810 393 aaKnown RBP9.94□□□□□ -0.82
UBC12YLR306W GCR2Q01722 534 aa9.94□□□□□ -0.82
UBC12YLR306W TYW1Q08960 810 aaKnown RBP9.94□□□□□ -0.82
UBC12YLR306W YJU3P28321 313 aa9.91□□□□□ -0.82
UBC12YLR306W RSC30P38781 883 aa9.91□□□□□ -0.82
UBC12YLR306W AFT1P22149 690 aa9.9□□□□□ -0.82
UBC12YLR306W CSN12P47130 423 aa9.9□□□□□ -0.82
UBC12YLR306W SYH1Q02875 849 aaKnown RBP9.9□□□□□ -0.82
UBC12YLR306W KIN1P13185 1064 aa9.87□□□□□ -0.83
UBC12YLR306W ASH1P34233 588 aa9.87□□□□□ -0.83
UBC12YLR306W RPN1P38764 993 aaKnown RBP9.87□□□□□ -0.83
UBC12YLR306W PKH3Q03306 898 aaPredicted RBP9.86□□□□□ -0.83
UBC12YLR306W HST3P53687 447 aa9.84□□□□□ -0.83
UBC12YLR306W KIP2P28743 706 aa9.8□□□□□ -0.84
UBC12YLR306W SSA2P10592 639 aaKnown RBP9.79□□□□□ -0.84
UBC12YLR306W ARG8P18544 423 aa9.79□□□□□ -0.84
UBC12YLR306W MRT4P33201 236 aaKnown RBP9.79□□□□□ -0.84
UBC12YLR306W IXR1P33417 597 aa9.79□□□□□ -0.84
UBC12YLR306W VAC17P25591 423 aa9.78□□□□□ -0.84
UBC12YLR306W MSB3P48566 633 aaPredicted RBP9.78□□□□□ -0.84
UBC12YLR306W RAD59Q12223 238 aa9.78□□□□□ -0.84
UBC12YLR306W MET22P32179 357 aa9.75□□□□□ -0.85
UBC12YLR306W RGA1P39083 1007 aa9.75□□□□□ -0.85
UBC12YLR306W ENV9Q08651 330 aa9.75□□□□□ -0.85
UBC12YLR306W YJR115WP47152 169 aa9.74□□□□□ -0.85
UBC12YLR306W RTT106P40161 455 aa9.73□□□□□ -0.85
UBC12YLR306W GUA1P38625 525 aaKnown RBP9.69□□□□□ -0.86
UBC12YLR306W UGA3P26370 528 aa9.68□□□□□ -0.86
UBC12YLR306W FIG4P42837 879 aa9.68□□□□□ -0.86
UBC12YLR306W GAR1P28007 205 aaKnown RBP9.67□□□□□ -0.86
UBC12YLR306W YDR444WQ04093 687 aa9.67□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms