RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C TY1A-AP0CX57 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-PR1P0CX58 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-ORP0CX59 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-PR2P0CX60 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-DR5P0CX65 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-ER2P0CX66 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-GR3P0CX67 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-LR1P0CX68 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-MR2P0CX69 440 aa8.13□□□□□ -1.11
SMD3YLR147C SEC2P17065 759 aa8.13□□□□□ -1.11
SMD3YLR147C NPL4P33755 580 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-JR2P47099 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-DR1Q03856 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-ML1Q04706 440 aaKnown RBP8.13□□□□□ -1.11
SMD3YLR147C TY1A-BRQ12217 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-NL2Q12470 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-GR2Q12485 440 aa8.13□□□□□ -1.11
SMD3YLR147C KEX2P13134 814 aa8.12□□□□□ -1.11
SMD3YLR147C XDJ1P39102 459 aa8.12□□□□□ -1.11
SMD3YLR147C PRT1P06103 763 aaKnown RBP8.11□□□□□ -1.11
SMD3YLR147C GCD11P32481 527 aaKnown RBP8.11□□□□□ -1.11
SMD3YLR147C RTF1P53064 558 aa8.09□□□□□ -1.11
SMD3YLR147C YNL115CP53925 644 aa8.09□□□□□ -1.11
SMD3YLR147C HST2P53686 357 aa8.08□□□□□ -1.12
SMD3YLR147C SCJ1P25303 377 aa8.07□□□□□ -1.12
SMD3YLR147C YMR196WQ04336 1088 aa8.07□□□□□ -1.12
SMD3YLR147C GYP1Q08484 637 aa8.07□□□□□ -1.12
SMD3YLR147C KTR1P27810 393 aaKnown RBP8.06□□□□□ -1.12
SMD3YLR147C SAS4Q04003 481 aa8.06□□□□□ -1.12
SMD3YLR147C TYW1Q08960 810 aaKnown RBP8.05□□□□□ -1.12
SMD3YLR147C CSN12P47130 423 aa8.04□□□□□ -1.12
SMD3YLR147C MMP1Q12372 583 aa8.04□□□□□ -1.12
SMD3YLR147C SDH2P21801 266 aa8.03□□□□□ -1.12
SMD3YLR147C GLN1P32288 370 aaKnown RBP8.03□□□□□ -1.12
SMD3YLR147C GUA1P38625 525 aaKnown RBP8.03□□□□□ -1.12
SMD3YLR147C AGE1Q04412 482 aa8.03□□□□□ -1.12
SMD3YLR147C SLY41P22215 453 aa8.02□□□□□ -1.13
SMD3YLR147C ESS1P22696 170 aa8□□□□□ -1.13
SMD3YLR147C TUB4P53378 473 aa7.99□□□□□ -1.13
SMD3YLR147C YJU3P28321 313 aa7.98□□□□□ -1.13
SMD3YLR147C RRN7P40992 514 aa7.98□□□□□ -1.13
SMD3YLR147C PAC1P39946 494 aaKnown RBP7.97□□□□□ -1.13
SMD3YLR147C SPT16P32558 1035 aaKnown RBP7.96□□□□□ -1.14
SMD3YLR147C SSA2P10592 639 aaKnown RBP7.94□□□□□ -1.14
SMD3YLR147C MRF1P30775 413 aaPredicted RBP7.94□□□□□ -1.14
SMD3YLR147C RSC30P38781 883 aa7.94□□□□□ -1.14
SMD3YLR147C PUS6P53294 404 aa7.94□□□□□ -1.14
SMD3YLR147C TRM1P15565 570 aaKnown RBP7.93□□□□□ -1.14
SMD3YLR147C PAT1P25644 796 aaKnown RBP7.93□□□□□ -1.14
SMD3YLR147C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
SMD3YLR147C HPC2Q01448 625 aa7.93□□□□□ -1.14
SMD3YLR147C PKH3Q03306 898 aaPredicted RBP7.93□□□□□ -1.14
SMD3YLR147C LAM6Q08001 693 aa7.9□□□□□ -1.14
SMD3YLR147C RAS1P01119 309 aa7.89□□□□□ -1.15
SMD3YLR147C ERG12P07277 443 aa7.89□□□□□ -1.15
SMD3YLR147C MOD5P07884 428 aa7.89□□□□□ -1.15
SMD3YLR147C RAD59Q12223 238 aa7.89□□□□□ -1.15
SMD3YLR147C AMS1P22855 1083 aa7.88□□□□□ -1.15
SMD3YLR147C DPS1P04802 557 aaKnown RBP7.87□□□□□ -1.15
SMD3YLR147C CST6P40535 587 aa7.87□□□□□ -1.15
SMD3YLR147C TFB3Q03290 321 aa7.87□□□□□ -1.15
SMD3YLR147C YEL077CQ3E7X8 1277 aa7.87□□□□□ -1.15
SMD3YLR147C ARG8P18544 423 aa7.86□□□□□ -1.15
SMD3YLR147C RPA14P50106 137 aa7.86□□□□□ -1.15
SMD3YLR147C TBF1Q02457 562 aa7.86□□□□□ -1.15
SMD3YLR147C YDL206WQ12424 762 aa7.86□□□□□ -1.15
SMD3YLR147C PDC1P06169 563 aaKnown RBP7.85□□□□□ -1.15
SMD3YLR147C TPD3P31383 635 aa7.84□□□□□ -1.15
SMD3YLR147C KXD1P53158 218 aa7.84□□□□□ -1.15
SMD3YLR147C YPR097WQ06839 1073 aa7.84□□□□□ -1.15
SMD3YLR147C PKC1P24583 1151 aa7.83□□□□□ -1.16
SMD3YLR147C HXT10P43581 546 aa7.83□□□□□ -1.16
SMD3YLR147C BDP1P46678 594 aa7.83□□□□□ -1.16
SMD3YLR147C BRL1P38770 471 aa7.81□□□□□ -1.16
SMD3YLR147C DMA2P53924 522 aa7.81□□□□□ -1.16
SMD3YLR147C ALR1Q08269 859 aa7.81□□□□□ -1.16
SMD3YLR147C FRK1Q03002 865 aaPredicted RBP7.8□□□□□ -1.16
SMD3YLR147C RRD1P40454 393 aaKnown RBP7.79□□□□□ -1.16
SMD3YLR147C MAK16P10962 306 aaPredicted RBP7.76□□□□□ -1.17
SMD3YLR147C CLA4P48562 842 aa7.76□□□□□ -1.17
SMD3YLR147C PUS5Q06244 254 aa7.76□□□□□ -1.17
SMD3YLR147C CSE4P36012 229 aa7.75□□□□□ -1.17
SMD3YLR147C YBL036CP38197 257 aa7.74□□□□□ -1.17
SMD3YLR147C HGH1P48362 394 aaKnown RBP7.71□□□□□ -1.18
SMD3YLR147C SRC1Q03707 834 aa7.71□□□□□ -1.18
SMD3YLR147C HED1Q03937 162 aa7.71□□□□□ -1.18
SMD3YLR147C VAC17P25591 423 aa7.7□□□□□ -1.18
SMD3YLR147C FIG4P42837 879 aa7.7□□□□□ -1.18
SMD3YLR147C BIO2P32451 375 aa7.69□□□□□ -1.18
SMD3YLR147C AIR1P40507 360 aaKnown RBP7.69□□□□□ -1.18
SMD3YLR147C YJL007CP47080 104 aa7.68□□□□□ -1.18
SMD3YLR147C NAF1P53919 492 aaKnown RBP7.68□□□□□ -1.18
SMD3YLR147C YPR084WQ06821 456 aa7.67□□□□□ -1.18
SMD3YLR147C YDJ1P25491 409 aaKnown RBP7.66□□□□□ -1.18
SMD3YLR147C SPT5P27692 1063 aaKnown RBP7.66□□□□□ -1.18
SMD3YLR147C SYH1Q02875 849 aaKnown RBP7.66□□□□□ -1.18
SMD3YLR147C BIM1P40013 344 aa7.65□□□□□ -1.18
SMD3YLR147C CDC4P07834 779 aa7.64□□□□□ -1.19
SMD3YLR147C SUP45P12385 437 aaKnown RBP7.64□□□□□ -1.19
SMD3YLR147C TEC1P18412 486 aa7.64□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms