RNA–Protein interactions for RNA: YLR119W

SRN2, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene SRN2, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRN2YLR119W TY1A-DR5P0CX65 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-ER2P0CX66 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-GR3P0CX67 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-LR1P0CX68 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-MR2P0CX69 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-JR2P47099 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-DR1Q03856 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-ML1Q04706 440 aaKnown RBP12.03□□□□□ -0.48
SRN2YLR119W TY1A-BRQ12217 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-NL2Q12470 440 aa12.03□□□□□ -0.48
SRN2YLR119W TY1A-GR2Q12485 440 aa12.03□□□□□ -0.48
SRN2YLR119W ATF2P53296 535 aa12.02□□□□□ -0.49
SRN2YLR119W GCD11P32481 527 aaKnown RBP12.01□□□□□ -0.49
SRN2YLR119W KEX2P13134 814 aa12□□□□□ -0.49
SRN2YLR119W NIS1P53939 407 aa11.99□□□□□ -0.49
SRN2YLR119W SEC2P17065 759 aa11.98□□□□□ -0.49
SRN2YLR119W DPS1P04802 557 aaKnown RBP11.97□□□□□ -0.49
SRN2YLR119W ERF2Q06551 359 aa11.96□□□□□ -0.49
SRN2YLR119W AIM7Q12156 149 aa11.95□□□□□ -0.5
SRN2YLR119W SDH2P21801 266 aa11.94□□□□□ -0.5
SRN2YLR119W SIT4P20604 311 aa11.92□□□□□ -0.5
SRN2YLR119W RTF1P53064 558 aa11.92□□□□□ -0.5
SRN2YLR119W FPK1P53739 893 aa11.9□□□□□ -0.5
SRN2YLR119W YMR196WQ04336 1088 aa11.9□□□□□ -0.5
SRN2YLR119W MRF1P30775 413 aaPredicted RBP11.88□□□□□ -0.51
SRN2YLR119W RRN7P40992 514 aa11.88□□□□□ -0.51
SRN2YLR119W YNL115CP53925 644 aa11.88□□□□□ -0.51
SRN2YLR119W SPT16P32558 1035 aaKnown RBP11.87□□□□□ -0.51
SRN2YLR119W AMS1P22855 1083 aa11.84□□□□□ -0.51
SRN2YLR119W RPN1P38764 993 aaKnown RBP11.84□□□□□ -0.51
SRN2YLR119W YEL077CQ3E7X8 1277 aa11.83□□□□□ -0.52
SRN2YLR119W PAT1P25644 796 aaKnown RBP11.82□□□□□ -0.52
SRN2YLR119W RAS1P01119 309 aa11.81□□□□□ -0.52
SRN2YLR119W HST2P53686 357 aa11.81□□□□□ -0.52
SRN2YLR119W AGE1Q04412 482 aa11.81□□□□□ -0.52
SRN2YLR119W ERG12P07277 443 aa11.8□□□□□ -0.52
SRN2YLR119W TUB4P53378 473 aa11.8□□□□□ -0.52
SRN2YLR119W SLY41P22215 453 aa11.78□□□□□ -0.52
SRN2YLR119W PAC1P39946 494 aaKnown RBP11.78□□□□□ -0.52
SRN2YLR119W KIN1P13185 1064 aa11.77□□□□□ -0.53
SRN2YLR119W SCJ1P25303 377 aa11.77□□□□□ -0.53
SRN2YLR119W GLN1P32288 370 aaKnown RBP11.75□□□□□ -0.53
SRN2YLR119W MMP1Q12372 583 aa11.75□□□□□ -0.53
SRN2YLR119W CST6P40535 587 aa11.73□□□□□ -0.53
SRN2YLR119W TYW1Q08960 810 aaKnown RBP11.73□□□□□ -0.53
SRN2YLR119W ESS1P22696 170 aa11.7□□□□□ -0.54
SRN2YLR119W KTR1P27810 393 aaKnown RBP11.69□□□□□ -0.54
SRN2YLR119W LAM6Q08001 693 aa11.68□□□□□ -0.54
SRN2YLR119W CSN12P47130 423 aa11.67□□□□□ -0.54
SRN2YLR119W FRK1Q03002 865 aaPredicted RBP11.67□□□□□ -0.54
SRN2YLR119W SRC1Q03707 834 aa11.66□□□□□ -0.54
SRN2YLR119W TRM1P15565 570 aaKnown RBP11.65□□□□□ -0.54
SRN2YLR119W BDP1P46678 594 aa11.65□□□□□ -0.54
SRN2YLR119W TBF1Q02457 562 aa11.65□□□□□ -0.54
SRN2YLR119W YJU3P28321 313 aa11.64□□□□□ -0.55
SRN2YLR119W PUS6P53294 404 aa11.64□□□□□ -0.55
SRN2YLR119W MOD5P07884 428 aa11.63□□□□□ -0.55
SRN2YLR119W KXD1P53158 218 aa11.61□□□□□ -0.55
SRN2YLR119W PKH3Q03306 898 aaPredicted RBP11.61□□□□□ -0.55
SRN2YLR119W YDL206WQ12424 762 aa11.61□□□□□ -0.55
SRN2YLR119W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.6□□□□□ -0.55not detected
SRN2YLR119W PDC1P06169 563 aaKnown RBP11.58□□□□□ -0.56
SRN2YLR119W SSA2P10592 639 aaKnown RBP11.57□□□□□ -0.56
SRN2YLR119W RPA14P50106 137 aa11.56□□□□□ -0.56
SRN2YLR119W GUA1P38625 525 aaKnown RBP11.55□□□□□ -0.56
SRN2YLR119W CLA4P48562 842 aa11.55□□□□□ -0.56
SRN2YLR119W RRD1P40454 393 aaKnown RBP11.54□□□□□ -0.56
SRN2YLR119W HXT10P43581 546 aa11.54□□□□□ -0.56
SRN2YLR119W ALR1Q08269 859 aa11.54□□□□□ -0.56
SRN2YLR119W TPD3P31383 635 aa11.53□□□□□ -0.56
SRN2YLR119W ARG8P18544 423 aa11.52□□□□□ -0.57
SRN2YLR119W YPR097WQ06839 1073 aa11.52□□□□□ -0.57
SRN2YLR119W TRK1P12685 1235 aa11.51□□□□□ -0.57
SRN2YLR119W RSC30P38781 883 aa11.51□□□□□ -0.57
SRN2YLR119W AIR1P40507 360 aaKnown RBP11.51□□□□□ -0.57
SRN2YLR119W PUS5Q06244 254 aa11.51□□□□□ -0.57
SRN2YLR119W RAD59Q12223 238 aa11.5□□□□□ -0.57
SRN2YLR119W LEO1P38439 464 aa11.46□□□□□ -0.57
SRN2YLR119W HED1Q03937 162 aa11.46□□□□□ -0.57
SRN2YLR119W HPC2Q01448 625 aa11.43□□□□□ -0.58
SRN2YLR119W CDC4P07834 779 aa11.41□□□□□ -0.58
SRN2YLR119W SYH1Q02875 849 aaKnown RBP11.38□□□□□ -0.59
SRN2YLR119W KIP2P28743 706 aa11.35□□□□□ -0.59
SRN2YLR119W BRL1P38770 471 aa11.35□□□□□ -0.59
SRN2YLR119W TFB3Q03290 321 aa11.35□□□□□ -0.59
SRN2YLR119W MET32Q12041 191 aa11.35□□□□□ -0.59
SRN2YLR119W VAC17P25591 423 aa11.31□□□□□ -0.6
SRN2YLR119W IXR1P33417 597 aa11.31□□□□□ -0.6
SRN2YLR119W MAK16P10962 306 aaPredicted RBP11.3□□□□□ -0.6
SRN2YLR119W BRE2P43132 505 aa11.28□□□□□ -0.6
SRN2YLR119W PKC1P24583 1151 aa11.26□□□□□ -0.61
SRN2YLR119W FIG4P42837 879 aa11.26□□□□□ -0.61
SRN2YLR119W ASH1P34233 588 aa11.25□□□□□ -0.61
SRN2YLR119W YBL036CP38197 257 aa11.25□□□□□ -0.61
SRN2YLR119W AFT1P22149 690 aa11.24□□□□□ -0.61
SRN2YLR119W HST3P53687 447 aa11.24□□□□□ -0.61
SRN2YLR119W CSE4P36012 229 aa11.23□□□□□ -0.61
SRN2YLR119W TEC1P18412 486 aa11.22□□□□□ -0.61
SRN2YLR119W NAF1P53919 492 aaKnown RBP11.2□□□□□ -0.62
SRN2YLR119W ITT1Q04638 464 aa11.2□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms